Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8K1A
DownloadVisualize
BU of 8k1a by Molmil
the wild-typed alpha-galactosidase 5
分子名称: Alpha-galactosidase
著者Li, Y.W, Ru, Y.X.
登録日2023-07-10
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Activity-Based Meta proteomics Drives Discovery and Enzymological Characterization of Novel alpha-galactosidases in the Gut Microbiome
To Be Published
6HSW
DownloadVisualize
BU of 6hsw by Molmil
A CE15 glucuronoyl esterase from Teredinibacter turnerae T7901
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, Carbohydrate esterase family 15 domain protein, ...
著者Mazurkewich, S, Lo Leggio, L, Navarro Poulsen, J.C, Larsbrink, J.
登録日2018-10-02
公開日2019-03-20
最終更新日2019-05-29
実験手法X-RAY DIFFRACTION (2.14734387 Å)
主引用文献Structure-function analyses reveal that a glucuronoyl esterase fromTeredinibacter turneraeinteracts with carbohydrates and aromatic compounds.
J.Biol.Chem., 294, 2019
8HE4
DownloadVisualize
BU of 8he4 by Molmil
The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
分子名称: Chitin deacetylase, ZINC ION, ~{N}-oxidanylnaphthalene-1-carboxamide
著者Liu, L, Li, Y.C, Zhou, Y, Yang, Q.
登録日2022-11-07
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Inhibition of chitin deacetylases to attenuate plant fungal diseases.
Nat Commun, 14, 2023
8DWF
DownloadVisualize
BU of 8dwf by Molmil
Glycosylase MutY variant E43S in complex with DNA containing d(8-oxo-G) paired with substrate adenine
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Adenine DNA glycosylase, ...
著者Russelburg, L.P, Demir, M, David, S.S, Horvath, M.P.
登録日2022-08-01
公開日2023-08-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Basis for Base Engagement and Stereochemistry Revealed by Alteration of Catalytic Residue Glu43 in DNA Repair Glycosylase MutY
To Be Published
1H2M
DownloadVisualize
BU of 1h2m by Molmil
Factor Inhibiting HIF-1 alpha in complex with HIF-1 alpha fragment peptide
分子名称: FACTOR INHIBITING HIF1, HYPOXIA-INDUCIBLE FACTOR 1 ALPHA, N-OXALYLGLYCINE, ...
著者Elkins, J.M, Hewitson, K.S, McNeill, L.A, Schlemminger, I, Seibel, J.F, Schofield, C.J.
登録日2002-08-12
公開日2002-11-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Factor-Inhibiting Hypoxia-Inducible Factor (Hif) Reveals Mechanism of Oxidative Modification of Hif-1Alpha
J.Biol.Chem., 278, 2003
2YNH
DownloadVisualize
BU of 2ynh by Molmil
HIV-1 Reverse Transcriptase in complex with inhibitor GSK500
分子名称: 4-chloranyl-N-[[4-chloranyl-3-(3-chloranyl-5-cyano-phenoxy)-2-fluoranyl-phenyl]methyl]-2-(hydroxymethyl)-1H-imidazole-5-carboxamide, D(-)-TARTARIC ACID, P51 RT, ...
著者Chong, P, Sebahar, P, Youngman, M, Garrido, D, Zhang, H, Stewart, E.L, Nolte, R.T, Wang, L, Ferris, R.G, Edelstein, M, Weaver, K, Mathis, A, Peat, A.
登録日2012-10-14
公開日2013-01-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Rational Design of Potent Non-Nucleoside Inhibitors of HIV-1 Reverse Transcriptase.
J.Med.Chem., 55, 2012
8HCN
DownloadVisualize
BU of 8hcn by Molmil
CryoEM Structure of Klebsiella pneumoniae UreD/urease complex
分子名称: Urease accessory protein UreD, Urease subunit alpha, Urease subunit beta, ...
著者Nim, Y.S, Fong, I.Y.H, Deme, J, Tsang, K.L, Caesar, J, Johnson, S, Wong, K.B, Lea, S.M.
登録日2022-11-02
公開日2023-05-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Delivering a toxic metal to the active site of urease.
Sci Adv, 9, 2023
8DWE
DownloadVisualize
BU of 8dwe by Molmil
Adenine glycosylase MutY variant E43Q in complex with DNA containing d(8-oxo-G) paired with substrate purine
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Adenine DNA glycosylase, ...
著者Russelburg, L.P, Demir, M, David, S.S, Horvath, M.P.
登録日2022-08-01
公開日2023-08-09
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Base Engagement and Stereochemistry Revealed by Alteration of Catalytic Residue Glu43 in DNA Repair Glycosylase MutY
To Be Published
5LVG
DownloadVisualize
BU of 5lvg by Molmil
Hen Egg White Lysozyme co-crystallized with cis-Ru(DMSO)4Cl2
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Kurpiewska, K, Halajko, P, Lewinski, K.
登録日2016-09-14
公開日2016-09-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ligand-dependent interaction of anticancer ruthenium complexes with hen egg white lysozyme and human lysozyme
To Be Published
5LVK
DownloadVisualize
BU of 5lvk by Molmil
Human Lysozyme co-crystallized with [H2Ind][trans-RuCl4(DMSO)(HInd)]
分子名称: CHLORIDE ION, Lysozyme C, NITRATE ION, ...
著者Kurpiewska, K, Szura, A, Lewinski, K.
登録日2016-09-14
公開日2016-09-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.491 Å)
主引用文献Ligand-dependent interaction of anticancer ruthenium complexes with hen egg white lysozyme and human lysozyme
To Be Published
1VEV
DownloadVisualize
BU of 1vev by Molmil
Crystal structure of peptide deformylase from Leptospira Interrogans (LiPDF) at pH6.5
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FORMIC ACID, Peptide deformylase, ...
著者Zhou, Z, Song, X, Li, Y, Gong, W.
登録日2004-04-06
公開日2005-08-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Novel conformational states of peptide deformylase from pathogenic bacterium Leptospira interrogans: implications for population shift
J.Biol.Chem., 280, 2005
6HLF
DownloadVisualize
BU of 6hlf by Molmil
X-ray structure of Lactobacillus brevis alcohol dehydrogenase mutant - K32A
分子名称: MAGNESIUM ION, MANGANESE (II) ION, R-specific alcohol dehydrogenase
著者Hermann, J, Nowotny, P, Schneider, S, Hekmat, D, Weuster-Botz, D.
登録日2018-09-11
公開日2018-12-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Rational Crystal Contact Engineering of Lactobacillus brevis Alcohol Dehydrogenase To Promote Technical Protein Crystallization
Cryst.Growth Des., 2019
5US6
DownloadVisualize
BU of 5us6 by Molmil
Structure of Dihydrodipicolinate Reductase from Vibrio vulnificus Bound to NADH and 2,6 Pyridine Dicarboxylic Acid with Intact Polyhistidine Tag
分子名称: 4-hydroxy-tetrahydrodipicolinate reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYRIDINE-2,6-DICARBOXYLIC ACID, ...
著者Mank, N.M, Arnette, A.K, Chruszcz, M.
登録日2017-02-13
公開日2018-02-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Comparative structural and mechanistic studies of 4-hydroxy-tetrahydrodipicolinate reductases from Mycobacterium tuberculosis and Vibrio vulnificus.
Biochim Biophys Acta Gen Subj, 1865, 2021
5LYE
DownloadVisualize
BU of 5lye by Molmil
Re-refined structure of the bacteriophage T4 short tail fibre PDB entry 1H6W containing 71 additionally identified residues
分子名称: CHLORIDE ION, Gp12, SULFATE ION
著者van Raaij, M.J, Taylor, N.M.I, Leiman, P.G.
登録日2016-09-27
公開日2018-01-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Contractile injection systems of bacteriophages and related systems.
Mol. Microbiol., 108, 2018
1GZH
DownloadVisualize
BU of 1gzh by Molmil
Crystal structure of the BRCT domains of human 53BP1 bound to the p53 tumor supressor
分子名称: CELLULAR TUMOR ANTIGEN P53, SULFATE ION, TUMOR SUPPRESSOR P53-BINDING PROTEIN 1, ...
著者Derbyshire, D.J, Doherty, A.J.
登録日2002-05-22
公開日2002-06-27
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of Human 53BP1 Brct Domains Bound to P53 Tumour Suppressor
Embo J., 21, 2002
8E5J
DownloadVisualize
BU of 8e5j by Molmil
The crystal structure of 4-n-butylbenzoic acid bound CYP199A4
分子名称: 4-butylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
著者Doherty, D.Z, Bell, S.G, Bruning, J.B.
登録日2022-08-22
公開日2023-08-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Exploring the Factors which Result in Cytochrome P450 Catalyzed Desaturation Versus Hydroxylation.
Chem Asian J, 17, 2022
5LZ2
DownloadVisualize
BU of 5lz2 by Molmil
Fragment-based inhibitors of Lipoprotein associated Phospholipase A2
分子名称: 3-cyano-~{N}-cyclopropyl-benzenesulfonamide, CHLORIDE ION, Platelet-activating factor acetylhydrolase, ...
著者Woolford, A, Day, P.
登録日2016-09-29
公開日2016-12-21
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fragment-Based Approach to the Development of an Orally Bioavailable Lactam Inhibitor of Lipoprotein-Associated Phospholipase A2 (Lp-PLA2).
J. Med. Chem., 59, 2016
5VBF
DownloadVisualize
BU of 5vbf by Molmil
Crystal structure of succinate semialdehyde dehydrogenase from Burkholderia vietnamiensis
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FORMIC ACID, GLYCEROL, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-03-29
公開日2017-04-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of succinate semialdehyde dehydrogenase from Burkholderia vietnamiensis
to be published
8HE2
DownloadVisualize
BU of 8he2 by Molmil
The structure of chitin deacetylase Pst_13661 from Puccinia striiformis f. sp. tritici
分子名称: Chitin deacetylase, ZINC ION, tert-butyl N-[3-[[4-(oxidanylcarbamoyl)phenyl]methylamino]-3-oxidanylidene-propyl]carbamate
著者Liu, L, Li, Y.C, Zhou, Y, Yang, Q.
登録日2022-11-07
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Inhibition of chitin deacetylases to attenuate plant fungal diseases.
Nat Commun, 14, 2023
6HMU
DownloadVisualize
BU of 6hmu by Molmil
Ternary complex of Estrogen Receptor alpha peptide and 14-3-3 sigma C45 mutant bound to disulfide fragment PPI stabilizer 6
分子名称: 14-3-3 protein sigma, 2-(4-chloranylphenoxy)-2-methyl-~{N}-(3-sulfanylpropyl)propanamide, Estrogen receptor, ...
著者Sijbesma, E, Hallenbeck, K.K, Leysen, S, Arkin, M.R, Ottmann, C.
登録日2018-09-12
公開日2019-02-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Site-Directed Fragment-Based Screening for the Discovery of Protein-Protein Interaction Stabilizers.
J. Am. Chem. Soc., 141, 2019
5LYR
DownloadVisualize
BU of 5lyr by Molmil
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-noeuromycin
分子名称: (2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE, ACETATE ION, Glycosyl hydrolase family 71, ...
著者Petricevic, M, Sobala, L.F, Fernandes, P.Z, Raich, L, Thompson, A.J, Bernardo-Seisdedos, G, Millet, O, Zhu, S, Sollogoub, M, Rovira, C, Jimenez-Barbero, J, Davies, G.J, Williams, S.J.
登録日2016-09-28
公開日2017-01-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Contribution of Shape and Charge to the Inhibition of a Family GH99 endo-alpha-1,2-Mannanase.
J. Am. Chem. Soc., 139, 2017
6HNB
DownloadVisualize
BU of 6hnb by Molmil
Crystal structure of aminotransferase Aro8 from Candida albicans
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Aromatic amino acid aminotransferase I, CHLORIDE ION, ...
著者Kiliszek, A, Rzad, K, Rypniewski, W, Milewski, S, Gabriel, I.
登録日2018-09-14
公開日2019-02-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal structures of aminotransferases Aro8 and Aro9 from Candida albicans and structural insights into their properties.
J.Struct.Biol., 205, 2019
2YNN
DownloadVisualize
BU of 2ynn by Molmil
yeast betaprime COP 1-304 with KTKTN motif
分子名称: COATOMER SUBUNIT BETA', KTKTN MOTIF, SULFATE ION
著者Jackson, L.P, Lewis, M, Kent, H.M, Edeling, M.A, Evans, P.R, Duden, R, Owen, D.J.
登録日2012-10-17
公開日2012-12-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.782 Å)
主引用文献Molecular Basis for Recognition of Dilysine Trafficking Motifs by Copi.
Dev.Cell, 23, 2012
5LZ7
DownloadVisualize
BU of 5lz7 by Molmil
Fragment-based inhibitors of Lipoprotein associated Phospholipase A2
分子名称: 2-fluoranyl-5-[2-[(4~{R})-4-methyl-2-oxidanylidene-4-phenyl-pyrrolidin-1-yl]ethoxy]benzenecarbonitrile, CHLORIDE ION, Platelet-activating factor acetylhydrolase
著者Woolford, A, Day, P.
登録日2016-09-29
公開日2016-12-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Fragment-Based Approach to the Development of an Orally Bioavailable Lactam Inhibitor of Lipoprotein-Associated Phospholipase A2 (Lp-PLA2).
J. Med. Chem., 59, 2016
5UVB
DownloadVisualize
BU of 5uvb by Molmil
The crystal structure of 4-cyclopropylbenzoate-bound CYP199A4
分子名称: 4-cyclopropylbenzoic acid, CHLORIDE ION, Cytochrome P450, ...
著者Coleman, T, Bruning, J.B, Bell, S.G.
登録日2017-02-20
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献The crystal structure of 4-cyclopropylbenzoate-bound CYP199A4
To Be Published

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon