PDB: 47902 件ウェブページステータス検索Chemie searchBIRD

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7W3X	Cryo-EM structure of plant receptor like protein RXEG1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Membrane-localized LRR receptor-like protein, ... 著者 Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J. 登録日 2021-11-26 公開日 2022-06-22 最終更新日 2022-10-26 実験手法 ELECTRON MICROSCOPY (3.21 Å) 主引用文献 Plant receptor-like protein activation by a microbial glycoside hydrolase. Nature, 610, 2022
6P1B	Transcription antitermination factor Q21 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Q protein 著者 Yin, Z, Ebright, R.H. 登録日 2019-05-19 公開日 2019-06-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.942 Å) 主引用文献 Structural basis of Q-dependent antitermination. Proc.Natl.Acad.Sci.USA, 116, 2019
6P20	Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164 分子名称: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, Baseplate central spike complex protein gp5,PHIKZ164, ... 著者 Buth, S.A, Shneider, M.M, Leiman, P.G. 登録日 2019-05-20 公開日 2020-05-27 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.749 Å) 主引用文献 Bacteriophage phiKZ gp163.1 PAAR repeat protein in complex with a T4 gp5 beta-helix fragment modified to mimic the phiKZ central spike gp164 To Be Published
5NXQ	Crystal structure of the carboxy-terminal domain of yeast Ctf4 bound to a stapled Sld5 CIP 分子名称: DNA polymerase alpha-binding protein, GLYCEROL, MET-ASP-ILE-UA1-ILE-ASP-ASP-ILE-LEU-UA2-GLU-LEU-ASP-LYS-GLU 著者 Wu, Y, Pellegrini, L. 登録日 2017-05-10 公開日 2017-08-30 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.413 Å) 主引用文献 Targeting the Genome-Stability Hub Ctf4 by Stapled-Peptide Design. Angew. Chem. Int. Ed. Engl., 56, 2017
6P2C	Structure of a nested set of N-terminally extended MHC I-peptides provides novel insights into antigen processing and presentation 分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-8 alpha chain, ... 著者 Li, L, Batliwala, M, Bouvier, M. 登録日 2019-05-21 公開日 2019-10-16 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.396 Å) 主引用文献 ERAP1 enzyme-mediated trimming and structural analyses of MHC I-bound precursor peptides yield novel insights into antigen processing and presentation. J.Biol.Chem., 294, 2019
6P2M	Crystal structure of the Caldicellulosiruptor lactoaceticus GH74 (ClGH74a) enzyme in complex with LLG xyloglucan 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, GLYCEROL, ... 著者 Stogios, P.J, Skarina, T, Arnal, G. 登録日 2019-05-21 公開日 2019-07-31 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Substrate specificity, regiospecificity, and processivity in glycoside hydrolase family 74. J.Biol.Chem., 294, 2019
7W3V	Plant receptor like protein RXEG1 in complex with xyloglucanase XEG1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cell 12A endoglucanase, ... 著者 Sun, Y, Wang, Y, Zhang, X.X, Chen, Z.D, Xia, Y.Q, Sun, Y.J, Zhang, M.M, Xiao, Y, Han, Z.F, Wang, Y.C, Chai, J.J. 登録日 2021-11-26 公開日 2022-06-22 最終更新日 2022-10-26 実験手法 ELECTRON MICROSCOPY (3.11 Å) 主引用文献 Plant receptor-like protein activation by a microbial glycoside hydrolase. Nature, 610, 2022
7WJ3	Crystal structure of HLA-C*1402 complexed with 4-mer lipopeptide 分子名称: 1,2-ETHANEDIOL, 4-mer lipopeptide, Beta-2-microglobulin, ... 著者 Kuroha, J, Morita, D, Asa, M, Sugita, M. 登録日 2022-01-05 公開日 2022-06-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.56343615 Å) 主引用文献 Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding. J.Biol.Chem., 298, 2022
5NSM	unliganded Structure of Leucyl aminopeptidase from Trypanosoma brucei 分子名称: Aminopeptidase, putative, BICARBONATE ION, ... 著者 Timm, J, Wilson, K. 登録日 2017-04-26 公開日 2017-08-02 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Characterization of Acidic M17 Leucine Aminopeptidases from the TriTryps and Evaluation of Their Role in Nutrient Starvation inTrypanosoma brucei. mSphere, 2, 2018
7WT4	Crystal structure of HLA-A*2402 complexed with 8-mer Influenza PB1 peptide 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, ... 著者 Asa, M, Morita, D, Sugita, M. 登録日 2022-02-03 公開日 2022-06-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.89459145 Å) 主引用文献 Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding. J.Biol.Chem., 298, 2022
6P88	E.coli LpxD in complex with compound 6 分子名称: 3-hydroxy-7,7-dimethyl-2-phenyl-4-(thiophen-2-yl)-2,6,7,8-tetrahydro-5H-pyrazolo[3,4-b]quinolin-5-one, MAGNESIUM ION, N-{3-[(furan-2-carbonyl)amino]phenyl}-2,3-dihydro-1,4-benzodioxine-6-carboxamide, ... 著者 Ma, X, Shia, S. 登録日 2019-06-06 公開日 2019-08-28 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural and Biological Basis of Small Molecule Inhibition ofEscherichia coliLpxD Acyltransferase Essential for Lipopolysaccharide Biosynthesis. Acs Infect Dis., 6, 2020
5NVX	pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-(1-fluorocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 10) 分子名称: Elongin-B, Elongin-C, N-[(1-fluorocyclopropyl)carbonyl]-3-methyl-L-valyl-(4R)-4-hydroxy-N-[4-(4-methyl-1,3-thiazol-5-yl)benzyl]-L-prolinamide, ... 著者 Gadd, M.S, Soares, P, Galdeano, C, Ciulli, A. 登録日 2017-05-04 公開日 2017-09-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Group-Based Optimization of Potent and Cell-Active Inhibitors of the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase: Structure-Activity Relationships Leading to the Chemical Probe (2S,4R)-1-((S)-2-(1-Cyanocyclopropanecarboxamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (VH298). J. Med. Chem., 61, 2018
7WT5	Crystal structure of HLA-A*2450 complexed with 8-mer model peptide 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 8-mer model peptide, ... 著者 Asa, M, Morita, D, Sugita, M. 登録日 2022-02-03 公開日 2022-06-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.0950768 Å) 主引用文献 Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding. J.Biol.Chem., 298, 2022
6PBT	Pseudopaline Dehydrogenase with (R)-Pseudopaline Soaked 2 hours 分子名称: 1,2-ETHANEDIOL, N-[(3S)-3-amino-3-carboxypropyl]-L-histidine, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 McFarlane, J.S, Lamb, A.L. 登録日 2019-06-14 公開日 2019-10-30 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Staphylopine and pseudopaline dehydrogenase from bacterial pathogens catalyze reversible reactions and produce stereospecific metallophores. J.Biol.Chem., 294, 2019
6P8Z	Crystal structure of human KRAS G12C covalently bound to an acryloylazetidine acetamide inhibitor 分子名称: 2-[5-chloro-2-cyclopropyl-3-(5-methoxy-3,4-dihydroisoquinoline-2(1H)-carbonyl)-7-methyl-1H-indol-1-yl]-N-(1-propanoylazetidin-3-yl)acetamide, CALCIUM ION, GTPase KRas, ... 著者 Mohr, C. 登録日 2019-06-08 公開日 2019-08-28 最終更新日 2019-10-02 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Discovery ofN-(1-Acryloylazetidin-3-yl)-2-(1H-indol-1-yl)acetamides as Covalent Inhibitors of KRASG12C. Acs Med.Chem.Lett., 10, 2019
6PAW	Crystal structure of DAPK2 S308A Calcium/Calmodulin complex 分子名称: CALCIUM ION, Calmodulin-1, Death-associated protein kinase 2 著者 Simon, B, Wilmanns, M. 登録日 2019-06-12 公開日 2020-06-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.953 Å) 主引用文献 Crystal structure of Death-associated protein kinase 2 in complex with Calcium Calmodulin To Be Published
5O7X	CRYSTAL STRUCTURE OF S. CEREVISIAE CORE FACTOR AT 3.2A RESOLUTION 分子名称: MAGNESIUM ION, RNA polymerase I-specific transcription initiation factor RRN11, RNA polymerase I-specific transcription initiation factor RRN6, ... 著者 Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P. 登録日 2017-06-09 公開日 2017-08-02 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural Basis of RNA Polymerase I Transcription Initiation. Cell, 169, 2017
6P8O	Structure of P. aeruginosa ATCC27853 HORMA2-deltaC 分子名称: CHLORIDE ION, HORMA domain containing protein, NICKEL (II) ION 著者 Ye, Q, Corbett, K.D, Lau, R.K. 登録日 2019-06-07 公開日 2019-12-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.604 Å) 主引用文献 HORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity. Mol.Cell, 77, 2020
6OZI	Crystal structure of Ciona intestinalis (Ci) Endonuclease V (D234N) in complex with a 23mer DNA containing an inosine followed by a ribo-adenosine 分子名称: DNA/RNA (23-MER), POTASSIUM ION, TRIETHYLENE GLYCOL, ... 著者 Samara, N.L, Yang, W. 登録日 2019-05-15 公開日 2019-09-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.302 Å) 主引用文献 Evolution of Inosine-Specific Endonuclease V from Bacterial DNase to Eukaryotic RNase. Mol.Cell, 76, 2019
7WJ2	Crystal structure of HLA-C*1402 complexed with 8-mer HIV gag peptide 分子名称: 1,2-ETHANEDIOL, 8-mer peptide, ACETATE ION, ... 著者 Kuroha, J, Morita, D, Asa, M, Sugita, M. 登録日 2022-01-05 公開日 2022-06-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.28 Å) 主引用文献 Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding. J.Biol.Chem., 298, 2022
5O0O	Deglycosylated Nogo Receptor with native disulfide structure 5 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ... 著者 Pronker, M.F, Janssen, B.J.C. 登録日 2017-05-16 公開日 2017-10-18 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Nogo Receptor crystal structures with a native disulfide pattern suggest a novel mode of self-interaction. Acta Crystallogr D Struct Biol, 73, 2017
5ODV	Structure of Watermelon mosaic virus potyvirus. 分子名称: RNA (5'-R(P*UP*UP*UP*UP*U)-3'), coat protein 著者 Zamora, M, Mendez-Lopez, E, Agirrezabala, X, Cuesta, R, Lavin, J.L, Sanchez-Pina, M.A, Aranda, M, Valle, M. 登録日 2017-07-06 公開日 2017-09-27 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Potyvirus virion structure shows conserved protein fold and RNA binding site in ssRNA viruses. Sci Adv, 3, 2017
6P17	Apo PCuAC domain from PmoF1 分子名称: PmoF1 著者 Sendzik, M.R, Fisher, O.S, Rosenzweig, A.C. 登録日 2019-05-19 公開日 2019-09-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.851 Å) 主引用文献 PCuAC domains from methane-oxidizing bacteria use a histidine brace to bind copper. J.Biol.Chem., 294, 2019
6PF7	Crystal structure of TS-DHFR from Cryptosporidium hominis in complex with NADPH, FdUMP and 2-(4-((2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl)benzamido)benzoic acid 分子名称: 2-({4-[(2-amino-4-oxo-4,7-dihydro-1H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzene-1-carbonyl}amino)benzoic acid, 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ... 著者 Czyzyk, D.J, Valhondo, M, Jorgensen, W.L, Anderson, K.S. 登録日 2019-06-21 公開日 2019-10-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.795 Å) 主引用文献 Structure activity relationship towards design of cryptosporidium specific thymidylate synthase inhibitors. Eur.J.Med.Chem., 183, 2019
7WT3	Crystal structure of HLA-A*2402 complexed with 4-mer lipopeptide 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-mer lipopeptide, ... 著者 Asa, M, Morita, D, Sugita, M. 登録日 2022-02-03 公開日 2022-06-22 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.887655 Å) 主引用文献 Crystal structures of N-myristoylated lipopeptide-bound HLA class I complexes indicate reorganization of B-pocket architecture upon ligand binding. J.Biol.Chem., 298, 2022

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