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7N0G
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BU of 7n0g by Molmil
CryoEm structure of SARS-CoV-2 spike protein (S-6P, 1-up) in complex with sybodies (Sb45)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Jiang, J, Huang, R, Margulies, D.
登録日2021-05-25
公開日2021-06-02
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Structures of synthetic nanobody-SARS-CoV-2 receptor-binding domain complexes reveal distinct sites of interaction.
J.Biol.Chem., 297, 2021
1D9J
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BU of 1d9j by Molmil
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE
分子名称: CECROPIN A-MAGAININ 2 HYBRID PEPTIDE
著者Oh, D, Kim, Y.
登録日1999-10-28
公開日1999-11-12
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献NMR structural characterization of cecropin A(1-8) - magainin 2(1-12) and cecropin A (1-8) - melittin (1-12) hybrid peptides.
J.Pept.Res., 53, 1999
1KEH
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BU of 1keh by Molmil
Precursor structure of cephalosporin acylase
分子名称: precursor of cephalosporin acylase
著者Kim, Y, Kim, S.
登録日2001-11-16
公開日2002-05-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Precursor structure of cephalosporin acylase. Insights into autoproteolytic activation in a new N-terminal hydrolase family
J.Biol.Chem., 277, 2002
1PT3
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BU of 1pt3 by Molmil
Crystal structures of nuclease-ColE7 complexed with octamer DNA
分子名称: 5'-GCGATCGC-3', Colicin E7
著者Hsia, K.C, Chak, K.F, Cheng, Y.S, Ku, W.Y, Yuan, H.S.
登録日2003-06-22
公開日2004-03-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献DNA binding and degradation by the HNH protein ColE7.
STRUCTURE, 12, 2004
2XT3
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BU of 2xt3 by Molmil
HUMAN KIF7, A KINESIN INVOLVED IN HEDGEHOG SIGNALLING
分子名称: ADENOSINE-5'-DIPHOSPHATE, KINESIN-LIKE PROTEIN KIF7, MAGNESIUM ION
著者Klejnot, M, Kozielski, F.
登録日2010-10-04
公開日2011-12-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.882 Å)
主引用文献Structural Insights Into Human Kif7, a Kinesin Involved in Hedgehog Signalling.
Acta Crystallogr.,Sect.D, 68, 2012
5VZA
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BU of 5vza by Molmil
Pre-catalytic ternary complex of human Polymerase Mu (G433S) mutant with incoming nonhydrolyzable UMPNPP
分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
著者Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
登録日2017-05-27
公開日2017-07-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
1Q5H
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BU of 1q5h by Molmil
Human dUTP Pyrophosphatase complex with dUDP
分子名称: DEOXYURIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, dUTP pyrophosphatase
著者Mol, C.D, Harris, J.M, McIntosh, E.M, Tainer, J.A.
登録日2003-08-07
公開日2003-08-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human dUTP pyrophosphatase: uracil recognition by a Beta hairpin and active sites formed by three separate subunits
Structure, 4, 1996
1D9L
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BU of 1d9l by Molmil
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE(P1)
分子名称: CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE
著者Oh, D, Kim, Y.
登録日1999-10-28
公開日1999-11-12
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献NMR structural characterization of cecropin A(1-8) - magainin 2(1-12) and cecropin A (1-8) - melittin (1-12) hybrid peptides.
J.Pept.Res., 53, 1999
1Q5U
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BU of 1q5u by Molmil
HUMAN DUTP PYROPHOSPHATASE
分子名称: dUTP pyrophosphatase
著者Mol, C.D, Harris, J.M, Mcintosh, E.M, Tainer, J.A.
登録日2003-08-11
公開日2003-08-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human dUTP Pyrophosphatase: Uracil Recognition by a Beta Hairpin and Active Sites Formed by Three Separate Subunits
Structure, 4, 1996
1CJL
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BU of 1cjl by Molmil
CRYSTAL STRUCTURE OF A CYSTEINE PROTEASE PROFORM
分子名称: PROCATHEPSIN L
著者Coulombe, R, Grochulski, P, Sivaraman, J, Cygler, M.
登録日1996-07-24
公開日1997-08-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of human procathepsin L reveals the molecular basis of inhibition by the prosegment.
EMBO J., 15, 1996
8PFG
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BU of 8pfg by Molmil
autoinhibited RfaH bound to E. coli transcription complex paused at ops site (encounter complex), not fully complementary scaffold
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-15
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PFJ
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fully recruited RfaH bound to E. coli transcription complex paused at ops site (not fully complementary scaffold; alternative state of RfaH)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-16
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
8PIM
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BU of 8pim by Molmil
fully recruited RfaH bound to E. coli transcription complex paused at ops site (not complementary scaffold)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-22
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
4QQJ
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BU of 4qqj by Molmil
Crystal Structure of FGF Receptor (FGFR) 4 Kinase Domain Harboring the V550L Gate-Keeper Mutation
分子名称: Fibroblast growth factor receptor 4, SULFATE ION
著者Huang, Z, Mohammadi, M.
登録日2014-06-27
公開日2014-10-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.682 Å)
主引用文献DFG-out Mode of Inhibition by an Irreversible Type-1 Inhibitor Capable of Overcoming Gate-Keeper Mutations in FGF Receptors.
Acs Chem.Biol., 10, 2015
4QQT
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BU of 4qqt by Molmil
Crystal Structure of FGF Receptor (FGFR) 4 Tyrosine Kinase Domain
分子名称: Fibroblast growth factor receptor 4, SULFATE ION
著者Huang, Z, Mohammadi, M.
登録日2014-06-29
公開日2014-10-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献DFG-out Mode of Inhibition by an Irreversible Type-1 Inhibitor Capable of Overcoming Gate-Keeper Mutations in FGF Receptors.
Acs Chem.Biol., 10, 2015
2OED
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BU of 2oed by Molmil
GB3 solution structure obtained by refinement of X-ray structure with dipolar couplings
分子名称: Immunoglobulin G-binding protein G
著者Ulmer, T.S, Ramirez, B.E, Delaglio, F, Bax, A, Grishaev, A.
登録日2006-12-29
公開日2007-01-30
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Evaluation of backbone proton positions and dynamics in a small protein by liquid crystal NMR spectroscopy
J.Am.Chem.Soc., 125, 2003
6V35
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BU of 6v35 by Molmil
Cryo-EM structure of Ca2+-free hsSlo1-beta4 channel complex
分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Tao, X, MacKinnon, R.
登録日2019-11-25
公開日2019-12-25
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Molecular structures of the human Slo1 K + channel in complex with beta 4.
Elife, 8, 2019
1PRY
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BU of 1pry by Molmil
Structure Determination of Fibrillarin Homologue From Hyperthermophilic Archaeon Pyrococcus furiosus (Pfu-65527)
分子名称: Fibrillarin-like pre-rRNA processing protein
著者Deng, L, Starostina, N.G, Liu, Z.-J, Rose, J.P, Terns, R.M, Terns, M.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2003-06-20
公開日2004-03-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structure determination of fibrillarin from the hyperthermophilic archaeon Pyrococcus furiosus
Biochem.Biophys.Res.Commun., 315, 2004
1BNO
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BU of 1bno by Molmil
NMR SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA, MINIMIZED AVERAGE STRUCTURE
分子名称: DNA POLYMERASE BETA
著者Liu, D.-J, Prasad, R, Wilson, S.H, Derose, E.F, Mullen, G.P.
登録日1996-04-25
公開日1996-12-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the N-terminal domain of DNA polymerase beta and mapping of the ssDNA interaction interface.
Biochemistry, 35, 1996
1BNP
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BU of 1bnp by Molmil
NMR SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA, 55 STRUCTURES
分子名称: DNA POLYMERASE BETA
著者Liu, D.-J, Prasad, R, Wilson, S.H, Derose, E.F, Mullen, G.P.
登録日1996-04-25
公開日1996-12-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the N-terminal domain of DNA polymerase beta and mapping of the ssDNA interaction interface.
Biochemistry, 35, 1996
7KFZ
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BU of 7kfz by Molmil
Structure of a ternary KRas(G13D)-SOS complex
分子名称: GTPase KRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Liu, C, Moghadamchargari, Z, Laganowsky, A, Zhao, M.
登録日2020-10-15
公開日2021-03-31
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Molecular assemblies of the catalytic domain of SOS with KRas and oncogenic mutants.
Proc.Natl.Acad.Sci.USA, 118, 2021
1BM0
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BU of 1bm0 by Molmil
CRYSTAL STRUCTURE OF HUMAN SERUM ALBUMIN
分子名称: SERUM ALBUMIN
著者Sugio, S, Kashima, A, Mochizuki, S, Noda, M, Kobayashi, K.
登録日1998-07-28
公開日1999-07-28
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of human serum albumin at 2.5 A resolution.
Protein Eng., 12, 1999
6URC
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BU of 6urc by Molmil
Crystal structure of IRE1a in complex with compound 18
分子名称: 2-chloro-N-(6-methyl-5-{[3-(2-{[(3S)-piperidin-3-yl]amino}pyrimidin-4-yl)pyridin-2-yl]oxy}naphthalen-1-yl)benzene-1-sulfonamide, GLYCEROL, Serine/threonine-protein kinase/endoribonuclease IRE1
著者Wallweber, H.H, Wang, W.
登録日2019-10-23
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Disruption of IRE1 alpha through its kinase domain attenuates multiple myeloma.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
1R4N
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APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ubiquitin-like protein NEDD8, ZINC ION, ...
著者Walden, H, Podgorski, M.S, Holton, J.M, Schulman, B.A.
登録日2003-10-07
公開日2003-12-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1.
Mol.Cell, 12, 2003
4QRC
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BU of 4qrc by Molmil
Crystal Structure of the Tyrosine Kinase Domain of FGF Receptor 4 in Complex with Ponatinib
分子名称: 3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide, Fibroblast growth factor receptor 4, SULFATE ION
著者Huang, Z, Mohammadi, M.
登録日2014-06-30
公開日2014-10-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献DFG-out Mode of Inhibition by an Irreversible Type-1 Inhibitor Capable of Overcoming Gate-Keeper Mutations in FGF Receptors.
Acs Chem.Biol., 10, 2015

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