Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3V3Y
DownloadVisualize
BU of 3v3y by Molmil
Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV
分子名称: 1,4-DIETHYLENE DIOXIDE, BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, ...
著者Gabdulkhakov, A.G, Fufina, T.Y, Vasilieva, L.G, Shuvalov, V.A.
登録日2011-12-14
公開日2012-03-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The site-directed mutation I(L177)H in Rhodobacter sphaeroides reaction center affects coordination of P(A) and B(B) bacteriochlorophylls.
Biochim.Biophys.Acta, 1817, 2012
2R56
DownloadVisualize
BU of 2r56 by Molmil
Crystal Structure of a Recombinant IgE Fab Fragment in Complex with Bovine Beta-Lactoglobulin Allergen
分子名称: Beta-lactoglobulin, DODECYL-BETA-D-MALTOSIDE, IgE Fab Fragment, ...
著者Niemi, M, Kallio, J.M, Hakulinen, N, Rouvinen, J.
登録日2007-09-03
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular interactions between a recombinant IgE antibody and the beta-lactoglobulin allergen.
Structure, 15, 2007
2R6Y
DownloadVisualize
BU of 2r6y by Molmil
Estrogen receptor alpha ligand-binding domain in complex with a SERM
分子名称: Estrogen receptor, [6-hydroxy-2-(4-hydroxyphenyl)-1-benzothien-3-yl][4-(2-pyrrolidin-1-ylethoxy)phenyl]methanone
著者Wang, Y.
登録日2007-09-06
公開日2008-04-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Prediction of the tissue-specificity of selective estrogen receptor modulators by using a single biochemical method.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6SKI
DownloadVisualize
BU of 6ski by Molmil
The Tle hydrolase bound to the TTR domain of the VgrG spike of the Type 6 secretion system
分子名称: Putative type VI secretion protein
著者Rapisarda, C, Fronzes, R.
登録日2019-08-15
公開日2020-04-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for loading and inhibition of a bacterial T6SS phospholipase effector by the VgrG spike.
Embo J., 39, 2020
7KZO
DownloadVisualize
BU of 7kzo by Molmil
Outer dynein arm docking complex bound to doublet microtubules from C. reinhardtii
分子名称: Dynein gamma chain, flagellar outer arm, GUANOSINE-5'-DIPHOSPHATE, ...
著者Walton, T, Wu, H, Brown, A.B.
登録日2020-12-10
公開日2021-01-20
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of a microtubule-bound axonemal dynein.
Nat Commun, 12, 2021
1EAV
DownloadVisualize
BU of 1eav by Molmil
Crystal Structures of Human Gephyrin and Plant Cnx1 G domains - Comparative Analysis and Functional Implications
分子名称: MOLYBDOPTERIN BIOSYNTHESIS CNX1 PROTEIN
著者Schwarz, G, Schrader, N, Mendel, R.R, Hecht, H.J.
登録日2001-07-17
公開日2001-11-23
最終更新日2019-04-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of Human Gephyrin and Plant Cnx1 G Domains: Comparative Analysis and Functional Implications
J.Mol.Biol., 312, 2001
8JJ5
DownloadVisualize
BU of 8jj5 by Molmil
Porcine uroplakin complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Tetraspanin, ...
著者Oda, T, Yanagisawa, H, Kikkawa, M.
登録日2023-05-29
公開日2023-06-14
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM elucidates the uroplakin complex structure within liquid-crystalline lipids in the porcine urothelial membrane.
Commun Biol, 6, 2023
4PQP
DownloadVisualize
BU of 4pqp by Molmil
Crystal structure of human SNX14 PX domain in space group P43212
分子名称: GLYCEROL, Sorting nexin-14
著者Mas, C, Norwood, S, Bugarcic, A, Kinna, G, Leneva, N, Kovtun, O, Teasdale, R, Collins, B.
登録日2014-03-03
公開日2014-09-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural Basis for Different Phosphoinositide Specificities of the PX Domains of Sorting Nexins Regulating G-protein Signaling.
J.Biol.Chem., 289, 2014
1OUD
DownloadVisualize
BU of 1oud by Molmil
CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V121A MUTANT
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
登録日1996-08-23
公開日1997-02-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
8G04
DownloadVisualize
BU of 8g04 by Molmil
Structure of signaling thrombopoietin-MPL receptor complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Thrombopoietin, Thrombopoietin receptor, ...
著者Tsutsumi, N, Jude, K.M, Gati, C, Garcia, K.C.
登録日2023-01-31
公開日2023-08-30
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure of the thrombopoietin-MPL receptor complex is a blueprint for biasing hematopoiesis.
Cell, 186, 2023
6SJL
DownloadVisualize
BU of 6sjl by Molmil
Structure of the Tle1 effector bound to the VgrG spike from the Type 6 secretion system
分子名称: Putative type VI secretion protein
著者Rapisarda, C, Fronzes, R.
登録日2019-08-13
公開日2020-04-29
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis for loading and inhibition of a bacterial T6SS phospholipase effector by the VgrG spike.
Embo J., 39, 2020
2VT4
DownloadVisualize
BU of 2vt4 by Molmil
TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONS AND BOUND CYANOPINDOLOL
分子名称: 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, BETA1 ADRENERGIC RECEPTOR, DECANE, ...
著者Warne, A, Serrano-Vega, M.J, Baker, J.G, Moukhametzianov, R, Edwards, P.C, Henderson, R, Leslie, A.G.W, Tate, C.G, Schertler, G.F.X.
登録日2008-05-09
公開日2008-06-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of a Beta1-Adrenergic G-Protein-Coupled Receptor.
Nature, 454, 2008
5SZT
DownloadVisualize
BU of 5szt by Molmil
Crystal structure of the large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with 7-(N-(10-hydroxydecanoyl)-aminopentenyl)-7-deaza-2'-dATP
分子名称: 7-(N-(10-hydroxydecanoyl)-aminopentenyl)-7-deaza-2'-dATP, ACETATE ION, DNA (5'-D(*AP*AP*AP*TP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), ...
著者Hottin, A, Betz, K, Marx, A.
登録日2016-08-15
公開日2016-12-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for the KlenTaq DNA Polymerase Catalysed Incorporation of Alkene- versus Alkyne-Modified Nucleotides.
Chemistry, 23, 2017
1P3R
DownloadVisualize
BU of 1p3r by Molmil
Crystal structure of the phosphotyrosin binding domain(PTB) of mouse Disabled 1(Dab1)
分子名称: Disabled homolog 2
著者Yun, M, Keshvara, L, Park, C.G, Zhang, Y.M, Dickerson, J.B, Zheng, J, Rock, C.O, Curran, T, Park, H.W.
登録日2003-04-18
公開日2003-08-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of the Dab homology domains of mouse disabled 1 and 2.
J.Biol.Chem., 278, 2003
7KME
DownloadVisualize
BU of 7kme by Molmil
CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN INHIBITED WITH SEL2711.
分子名称: HIRUGEN, SEL2711, SODIUM ION, ...
著者Mochalkin, I, Tulinsky, A.
登録日1999-02-26
公開日1999-03-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of thrombin retro-inhibited with SEL2711 and SEL2770 as they relate to factor Xa binding.
Acta Crystallogr.,Sect.D, 55, 1999
1PE4
DownloadVisualize
BU of 1pe4 by Molmil
SOLUTION STRUCTURE OF TOXIN CN12 FROM CENTRUROIDES NOXIUS ALFA SCORPION TOXIN ACTING ON SODIUM CHANNELS. NMR STRUCTURE
分子名称: Neurotoxin Cn11
著者Del Rio-Portilla, F, Hernandez-Marin, E, Pimienta, G, Coronas, F.V, Zamudio, F.Z, Rodrguez de la Vega, R.C, Wanke, E, Possani, L.D.
登録日2003-05-21
公開日2004-05-25
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR solution structure of Cn12, a novel peptide from the Mexican scorpion Centruroides noxius with a typical beta-toxin sequence but with alpha-like physiological activity.
Eur.J.Biochem., 271, 2004
6SXO
DownloadVisualize
BU of 6sxo by Molmil
Cryo-EM structure of the human Ebp1-ribosome complex
分子名称: 28S ribosomal RNA including ES27L-B (2839-3265), 5.8S ribosomal RNA, 60S ribosomal protein L19, ...
著者Wild, K, Aleksic, M, Pfeffer, M, Sinning, I.
登録日2019-09-26
公開日2020-02-19
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献MetAP-like Ebp1 occupies the human ribosomal tunnel exit and recruits flexible rRNA expansion segments.
Nat Commun, 11, 2020
5TWP
DownloadVisualize
BU of 5twp by Molmil
Pre-catalytic ternary complex of human Polymerase Mu with incoming nonhydrolyzable UMPNPP
分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ...
著者Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C.
登録日2016-11-14
公開日2017-07-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.
Nucleic Acids Res., 45, 2017
1PCS
DownloadVisualize
BU of 1pcs by Molmil
THE 2.15 A CRYSTAL STRUCTURE OF A TRIPLE MUTANT PLASTOCYANIN FROM THE CYANOBACTERIUM SYNECHOCYSTIS SP. PCC 6803
分子名称: COPPER (II) ION, PLASTOCYANIN
著者Romero, A, De La Cerda, B, Varela, P.F, Navarro, J.A, Hervas, M, De La Rosa, M.A.
登録日1997-06-17
公開日1997-12-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The 2.15 A crystal structure of a triple mutant plastocyanin from the cyanobacterium Synechocystis sp. PCC 6803.
J.Mol.Biol., 275, 1998
1PDX
DownloadVisualize
BU of 1pdx by Molmil
PUTIDAREDOXIN
分子名称: FE2/S2 (INORGANIC) CLUSTER, PROTEIN (PUTIDAREDOXIN)
著者Pochapsky, T.C, Jain, N.U, Kuti, M, Lyons, T.A, Heymont, J.
登録日1999-02-15
公開日1999-05-12
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献A refined model for the solution structure of oxidized putidaredoxin.
Biochemistry, 38, 1999
8FVZ
DownloadVisualize
BU of 8fvz by Molmil
PiPT Y150A
分子名称: CITRATE ANION, PHOSPHATE ION, Phosphate transporter
著者Gupta, M, Finer-Moore, J, Stroud, R.M.
登録日2023-01-20
公開日2024-01-03
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Roles of PiPT residues in phosphate binding and transport tested by mutagenesis
To be published
7L70
DownloadVisualize
BU of 7l70 by Molmil
The eukaryotic translation initiation factor 2B from Homo sapiens in its apo form
分子名称: Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, Translation initiation factor eIF-2B subunit delta, ...
著者Wang, L, Schoof, M, Lawrence, R, Boone, M, Frost, A, Walter, P.
登録日2020-12-24
公開日2021-03-24
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献eIF2B conformation and assembly state regulates the integrated stress response.
Elife, 10, 2021
1F4F
DownloadVisualize
BU of 1f4f by Molmil
CRYSTAL STRUCTURE OF E. COLI THYMIDYLATE SYNTHASE COMPLEXED WITH SP-722
分子名称: 4-[[GLUTAMIC ACID]-CARBONYL]-BENZENE-SULFONYL-D-PROLINE, SULFATE ION, THYMIDYLATE SYNTHASE
著者Erlanson, D.A, Braisted, A.C, Raphael, D.R, Randal, M, Stroud, R.M, Gordon, E, Wells, J.A.
登録日2000-06-07
公開日2000-06-22
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Site-directed ligand discovery.
Proc.Natl.Acad.Sci.USA, 97, 2000
7L49
DownloadVisualize
BU of 7l49 by Molmil
Cryo-EM structure of CRISPR-Cas12f Ternary Complex
分子名称: Cas12f1, NTS, Substrate, ...
著者Chang, L, Li, Z.
登録日2020-12-18
公開日2021-06-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis for substrate recognition and cleavage by the dimerization-dependent CRISPR-Cas12f nuclease.
Nucleic Acids Res., 49, 2021
5TUV
DownloadVisualize
BU of 5tuv by Molmil
Crystal structure of the E2F5-DP1-p107 ternary complex
分子名称: Retinoblastoma-like protein 1, Transcription factor DP1, Transcription factor E2F5
著者Liban, T.J, Tripathi, S.M, Rubin, S.M.
登録日2016-11-07
公開日2017-05-03
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Conservation and divergence of C-terminal domain structure in the retinoblastoma protein family.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon