Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7EGB
DownloadVisualize
BU of 7egb by Molmil
TFIID-based holo PIC on SCP promoter
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
3JUH
DownloadVisualize
BU of 3juh by Molmil
Crystal structure of a mutant of human protein kinase CK2alpha with altered cosubstrate specificity
分子名称: CHLORIDE ION, Casein kinase II subunit alpha, GLYCEROL, ...
著者Niefind, K, Issinger, O.-G.
登録日2009-09-15
公開日2009-10-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Inclining the purine base binding plane in protein kinase CK2 by exchanging the flanking side-chains generates a preference for ATP as a cosubstrate
J.Mol.Biol., 347, 2005
7EG9
DownloadVisualize
BU of 7eg9 by Molmil
TFIID-based intermediate PIC on SCP promoter
分子名称: DNA (79-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Chen, X, Qi, Y, Wang, X, Wu, Z, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
7EG8
DownloadVisualize
BU of 7eg8 by Molmil
TFIID-based core PIC on PUMA promoter
分子名称: DNA (85-MER), DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Chen, X, Qi, Y, Hou, H, Wang, X, Wu, Z, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-05
最終更新日2021-05-19
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
6I4P
DownloadVisualize
BU of 6i4p by Molmil
Crystal structure of the disease-causing G194C mutant of the human dihydrolipoamide dehydrogenase
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dihydrolipoyl dehydrogenase, mitochondrial, ...
著者Szabo, E, Wilk, P, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A.
登録日2018-11-10
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Underlying molecular alterations in human dihydrolipoamide dehydrogenase deficiency revealed by structural analyses of disease-causing enzyme variants.
Hum.Mol.Genet., 28, 2019
6IV9
DownloadVisualize
BU of 6iv9 by Molmil
the Cas13d binary complex
分子名称: Cas13d, MAGNESIUM ION, crRNA (50-MER)
著者Zhang, B, Ye, Y.M, Ye, W.W, OuYang, S.Y.
登録日2018-12-02
公開日2019-06-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Two HEPN domains dictate CRISPR RNA maturation and target cleavage in Cas13d.
Nat Commun, 10, 2019
6DU8
DownloadVisualize
BU of 6du8 by Molmil
Human Polycsytin 2-l1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Polycystic kidney disease 2-like 1 protein
著者Hulse, R.E, Clapham, D.E, Li, Z, Huang, R.K, Zhang, J.
登録日2018-06-20
公開日2018-07-25
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献Cryo-EM structure of the polycystin 2-l1 ion channel.
Elife, 7, 2018
1B7V
DownloadVisualize
BU of 1b7v by Molmil
Structure of the C-553 cytochrome from Bacillus pasteruii to 1.7 A resolution
分子名称: HEME C, PROTEIN (CYTOCHROME C-553)
著者Gonzalez, A, Benini, S, Rypniewski, W.R, Wilson, K.S, Ciurli, S.
登録日1999-01-22
公開日2000-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of oxidized Bacillus pasteurii cytochrome c553 at 0.97-A resolution.
Biochemistry, 39, 2000
6IBJ
DownloadVisualize
BU of 6ibj by Molmil
Copper binding protein from Laetisaria arvalis (LaX325)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity CAZyme, COPPER (II) ION
著者Frandsen, K.E.H, Tandrup, T, Labourel, A, Haon, M, Berrin, J.-G, Lo Leggio, L.
登録日2018-11-30
公開日2019-11-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A fungal family of lytic polysaccharide monooxygenase-like copper proteins.
Nat.Chem.Biol., 16, 2020
7EGC
DownloadVisualize
BU of 7egc by Molmil
p53-bound TFIID-based holo PIC on HDM2 promoter
分子名称: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ...
著者Chen, X, Wu, Z, Hou, H, Qi, Y, Wang, X, Li, J, Xu, Y.
登録日2021-03-24
公開日2021-05-12
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into preinitiation complex assembly on core promoters.
Science, 372, 2021
6B5H
DownloadVisualize
BU of 6b5h by Molmil
ALDH1A2 liganded with NAD and 1-(4-cyanophenyl)-N-(3-fluorophenyl)-3-[4-(methylsulfonyl)phenyl]-1H-pyrazole-4-carboxamide (compound CM121)
分子名称: 1-(4-cyanophenyl)-N-(3-fluorophenyl)-3-[4-(methylsulfonyl)phenyl]-1H-pyrazole-4-carboxamide, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Retinal dehydrogenase 2
著者Chen, Y, Zhu, J.-Y, Schonbrunn, E.
登録日2017-09-29
公開日2018-01-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of ALDH1A2 Inhibition by Irreversible and Reversible Small Molecule Inhibitors.
ACS Chem. Biol., 13, 2018
6IBH
DownloadVisualize
BU of 6ibh by Molmil
Copper binding protein from Laetisaria arvalis (LaX325)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Auxiliary activity CAZyme, COPPER (II) ION, ...
著者Frandsen, K.E.H, Tandrup, T, Labourel, A, Haon, M, Berrin, J.-G, Lo Leggio, L.
登録日2018-11-30
公開日2019-11-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献A fungal family of lytic polysaccharide monooxygenase-like copper proteins.
Nat.Chem.Biol., 16, 2020
1ICG
DownloadVisualize
BU of 1icg by Molmil
STRUCTURE OF THE HYBRID RNA/DNA R-GCUUCGGC-D[F]U IN PRESENCE OF IR(NH3)6+++
分子名称: 5'-R(*GP*CP*UP*UP*CP*GP*GP*C)-D(P*(UFP))-3', CHLORIDE ION, IRIDIUM HEXAMMINE ION
著者Cruse, W, Saludjian, P, Neuman, A, Prange, T.
登録日2001-03-31
公開日2001-04-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues.
Acta Crystallogr.,Sect.D, 57, 2001
3O24
DownloadVisualize
BU of 3o24 by Molmil
Crystal structure of the brevianamide F prenyltransferase FtmPT1 from Aspergillus fumigatus
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Brevianamide F prenyltransferase, CHLORIDE ION, ...
著者Jost, M, Zocher, G.E, Stehle, T.
登録日2010-07-22
公開日2010-12-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-function analysis of an enzymatic prenyl transfer reaction identifies a reaction chamber with modifiable specificity.
J.Am.Chem.Soc., 132, 2010
1KFU
DownloadVisualize
BU of 1kfu by Molmil
Crystal Structure of Human m-Calpain Form II
分子名称: M-CALPAIN LARGE SUBUNIT, M-CALPAIN SMALL SUBUNIT
著者Strobl, S, Fernandez-Catalan, C, Braun, M, Huber, R, Masumoto, H, Nakagawa, K, Irie, A, Sorimachi, H, Bourenkow, G, Bartunik, H, Suzuki, K, Bode, W.
登録日2001-11-23
公開日2001-12-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of calcium-free human m-calpain suggests an electrostatic switch mechanism for activation by calcium.
Proc.Natl.Acad.Sci.USA, 97, 2000
7WU7
DownloadVisualize
BU of 7wu7 by Molmil
Prefoldin-tubulin-TRiC complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Prefoldin subunit 1, Prefoldin subunit 2, ...
著者Gestaut, D, Zhao, Y, Park, J, Ma, B, Leitner, A, Collier, M, Pintilie, G, Roh, S.-H, Chiu, W, Frydman, J.
登録日2022-02-07
公開日2022-12-21
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献Structural visualization of the tubulin folding pathway directed by human chaperonin TRiC/CCT.
Cell, 185, 2022
1KJ1
DownloadVisualize
BU of 1kj1 by Molmil
MANNOSE-SPECIFIC AGGLUTININ (LECTIN) FROM GARLIC (ALLIUM SATIVUM) BULBS COMPLEXED WITH ALPHA-D-MANNOSE
分子名称: alpha-D-mannopyranose, lectin I, lectin II
著者Ramachandraiah, G, Chandra, N.R, Surolia, A, Vijayan, M.
登録日2001-12-04
公開日2002-02-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Re-refinement using reprocessed data to improve the quality of the structure: a case study involving garlic lectin.
Acta Crystallogr.,Sect.D, 58, 2002
6HHH
DownloadVisualize
BU of 6hhh by Molmil
Crystal Structure of AKT1 in Complex with Covalent-Allosteric AKT Inhibitor 31
分子名称: RAC-alpha serine/threonine-protein kinase, ~{N}-[4-[4-[[4-(5-oxidanylidene-3-phenyl-6~{H}-1,6-naphthyridin-2-yl)phenyl]methyl]piperazin-1-yl]phenyl]propanamide
著者Landel, I, Weisner, J, Mueller, M.P, Scheinpflug, R, Rauh, D.
登録日2018-08-28
公開日2019-02-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and chemical insights into the covalent-allosteric inhibition of the protein kinase Akt.
Chem Sci, 10, 2019
8PH9
DownloadVisualize
BU of 8ph9 by Molmil
E. coli RNA polymerase paused at ops site (non-complementary scaffold)
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zuber, P.K, Said, N, Hilal, T, Loll, B, Wahl, M.C, Knauer, S.H.
登録日2023-06-19
公開日2024-04-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Concerted transformation of a hyper-paused transcription complex and its reinforcing protein.
Nat Commun, 15, 2024
7EEB
DownloadVisualize
BU of 7eeb by Molmil
Structure of the CatSpermasome
分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wu, J.P, Ke, M.
登録日2021-03-18
公開日2021-07-28
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of a mammalian sperm cation channel complex.
Nature, 595, 2021
1HM6
DownloadVisualize
BU of 1hm6 by Molmil
X-RAY STRUCTURE OF FULL-LENGTH ANNEXIN 1
分子名称: ANNEXIN 1, SULFATE ION
著者Rosengarth, A, Gerke, V, Luecke, H.
登録日2000-12-04
公開日2001-02-28
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray structure of full-length annexin 1 and implications for membrane aggregation.
J.Mol.Biol., 306, 2001
8EO2
DownloadVisualize
BU of 8eo2 by Molmil
Lufaxin a bifunctional inhibitor of complement and coagulation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, ...
著者Andersen, J.F, Strayer, E.C.
登録日2022-10-01
公開日2023-08-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献A bispecific inhibitor of complement and coagulation blocks activation in complementopathy models via a novel mechanism.
Blood, 141, 2023
6FD0
DownloadVisualize
BU of 6fd0 by Molmil
Human KIBRA C2 domain mutant M734I S735A
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Protein KIBRA
著者Crennell, S.J, Posner, M.G, Bagby, S.
登録日2017-12-21
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.64215851 Å)
主引用文献Distinctive phosphoinositide- and Ca2+-binding properties of normal and cognitive performance-linked variant forms of KIBRA C2 domain.
J. Biol. Chem., 293, 2018
5O3L
DownloadVisualize
BU of 5o3l by Molmil
Paired helical filament in Alzheimer's disease brain
分子名称: Microtubule-associated protein tau
著者Fitzpatrick, A.W.P, Falcon, B, He, S, Murzin, A.G, Murshudov, G, Garringer, H.G, Crowther, R.A, Ghetti, B, Goedert, M, Scheres, S.H.W.
登録日2017-05-24
公開日2017-07-26
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures of tau filaments from Alzheimer's disease.
Nature, 547, 2017
6IPU
DownloadVisualize
BU of 6ipu by Molmil
Human nucleosome core particle containing 145 bp of DNA
分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A type 1-B/E, ...
著者DeFalco, L, Davey, C.A.
登録日2018-11-04
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献PARP1 exhibits enhanced association and catalytic efficiency with gamma H2A.X-nucleosome.
Nat Commun, 10, 2019

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon