PDB: 19260 件ウェブページステータス検索Chemie searchBIRD

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3GZE	Algal prolyl 4-hydroxylase complexed with zinc and (Ser-Pro)5 peptide substrate 分子名称: ACETIC ACID, Peptide substrate (Ser-Pro)5, Predicted protein, ... 著者 Koski, M.K, Wierenga, R.K. 登録日 2009-04-07 公開日 2009-06-23 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 The Crystal Structure of an Algal Prolyl 4-Hydroxylase Complexed with a Proline-rich Peptide Reveals a Novel Buried Tripeptide Binding Motif J.Biol.Chem., 284, 2009
3H0N	Crystal structure of a duf1470 family protein (jann_2411) from jannaschia sp. ccs1 at 1.45 A resolution 分子名称: ACETATE ION, GLYCEROL, NICKEL (II) ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2009-04-09 公開日 2009-04-21 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 The structure of Jann_2411 (DUF1470) from Jannaschia sp. at 1.45  resolution reveals a new fold (the ABATE domain) and suggests its possible role as a transcription regulator. Acta Crystallogr.,Sect.F, 66, 2010
3H0S	Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 7 分子名称: 1'-(1H-indazol-7-ylcarbonyl)-6-methylspiro[chromene-2,4'-piperidin]-4(3H)-one, Acetyl-CoA carboxylase, SULFATE ION 著者 Vajdos, F. 登録日 2009-04-10 公開日 2010-04-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Discovery of small molecule isozyme non-specific inhibitors of mammalian acetyl-CoA carboxylase 1 and 2. Bioorg.Med.Chem.Lett., 20, 2010
3H1P	Mature Caspase-7 I213A with DEVD-CHO inhibitor bound to active site 分子名称: Caspase-7, N-ACETYL-L-ALPHA-ASPARTYL-L-ALPHA-GLUTAMYL-N-[(2S)-1-CARBOXY-3-HYDROXYPROPAN-2-YL]-L-VALINAMIDE 著者 Witkowski, W.A, Hardy, J.A. 登録日 2009-04-13 公開日 2009-06-30 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 L2' loop is critical for caspase-7 active site formation. Protein Sci., 18, 2009
3H1V	Human glucokinase in complex with a synthetic activator 分子名称: 1-({5-[4-(methylsulfonyl)phenoxy]-2-pyridin-2-yl-1H-benzimidazol-6-yl}methyl)pyrrolidine-2,5-dione, Glucokinase, SODIUM ION, ... 著者 Kamata, K, Takahashi, K. 登録日 2009-04-14 公開日 2009-10-06 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 The design and optimization of a series of 2-(pyridin-2-yl)-1H-benzimidazole compounds as allosteric glucokinase activators. Bioorg.Med.Chem., 17, 2009
3H12	Crystal structure of putative mandelate racemase from Bordetella Bronchiseptica RB50 分子名称: SODIUM ION, mandelate racemase 著者 Malashkevich, V.N, Toro, R, Morano, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2009-04-10 公開日 2009-04-21 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of putative mandelate racemase from Bordetella Bronchiseptica RB50 To be Published
3H87	Rv0301 Rv0300 Toxin Antitoxin Complex from Mycobacterium tuberculosis 分子名称: BETA-MERCAPTOETHANOL, GLYCEROL, IMIDAZOLE, ... 著者 Min, A, Sawaya, M.R, Cascio, D, Eisenberg, D, Integrated Center for Structure and Function Innovation (ISFI) 登録日 2009-04-28 公開日 2009-05-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 The crystal structure of the Rv0301-Rv0300 VapBC-3 toxin-antitoxin complex from M. tuberculosis reveals a Mg(2+) ion in the active site and a putative RNA-binding site. Protein Sci., 21, 2012
3H3S	Crystal structure of the CERT START domain in complex with HPA-15 分子名称: Goodpasture antigen binding protein, N-[(1R,3R)-3-hydroxy-1-(hydroxymethyl)-3-phenylpropyl]pentadecanamide 著者 Kudo, N, Wakatsuki, S, Kato, R. 登録日 2009-04-17 公開日 2010-03-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Crystal structures of the CERT START domain with inhibitors provide insights into the mechanism of ceramide transfer. J.Mol.Biol., 396, 2010
3H8F	High pH native structure of leucine aminopeptidase from Pseudomonas putida 分子名称: BICARBONATE ION, Cytosol aminopeptidase, MANGANESE (II) ION, ... 著者 Kale, A, Dijkstra, B.W, Sonke, T, Thunnissen, A.M.W.H. 登録日 2009-04-29 公開日 2010-04-14 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of the leucine aminopeptidase from Pseudomonas putida reveals the molecular basis for its enantioselectivity and broad substrate specificity. J.Mol.Biol., 398, 2010
3H45	Glycerol Kinase H232E with Ethylene Glycol 分子名称: 1,2-ETHANEDIOL, Glycerol kinase, PHOSPHATE ION 著者 Yeh, J.I, Kettering, R.D. 登録日 2009-04-17 公開日 2009-06-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation Biochemistry, 48, 2009
3H99	Structure of a mutant methionyl-tRNA synthetase with modified specificity complexed with methionine 分子名称: CITRIC ACID, METHIONINE, Methionyl-tRNA synthetase, ... 著者 Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y. 登録日 2009-04-30 公開日 2009-12-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity. J.Mol.Biol., 394, 2009
3H5G	Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. 分子名称: ACETATE ION, COIL SER L16D-Pen, ZINC ION 著者 Peacock, A.F.A, Stuckey, J.A, Pecoraro, V.L. 登録日 2009-04-22 公開日 2009-07-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides. Angew.Chem.Int.Ed.Engl., 48, 2009
3GL4	X-ray structure of photobleached killerred 分子名称: KillerRed 著者 Pletnev, S, Pletneva, N.V, Pletnev, V.Z. 登録日 2009-03-11 公開日 2009-09-08 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed. J.Biol.Chem., 284, 2009
3GO7	Crystal Structure of M. tuberculosis ribokinase (Rv2436) in complex with ribose 分子名称: MAGNESIUM ION, RIBOKINASE RBSK, alpha-D-ribofuranose 著者 Masters, E.I, Sun, Y, Wang, Y, Parker, W.B, Li, R. 登録日 2009-03-18 公開日 2010-03-31 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436) To be Published
3H91	Crystal structure of the complex of human chromobox homolog 2 (CBX2) and H3K27 peptide 分子名称: Chromobox protein homolog 2, H3K27 peptide 著者 Amaya, M.F, Ravichandran, M, Loppnau, P, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC) 登録日 2009-04-29 公開日 2009-08-18 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Recognition and specificity determinants of the human cbx chromodomains. J.Biol.Chem., 286, 2011
3GP0	Crystal Structure of Human Mitogen Activated Protein Kinase 11 (p38 beta) in complex with Nilotinib 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Mitogen-activated protein kinase 11, ... 著者 Filippakopoulos, P, Barr, A, Fedorov, O, Keates, T, Soundararajan, M, Elkins, J, Salah, E, Burgess-Brown, N, Ugochukwu, E, Pike, A.C.W, Muniz, J, Roos, A, Chaikuad, A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2009-03-20 公開日 2009-04-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Human Mitogen Activated Protein Kinase 11 (p38 beta) in complex with Nilotinib To be Published
3H97	Structure of a mutant methionyl-tRNA synthetase with modified specificity 分子名称: CITRIC ACID, Methionyl-tRNA synthetase, ZINC ION 著者 Schmitt, E, Tanrikulu, I.C, Yoo, T.H, Panvert, M, Tirrell, D.A, Mechulam, Y. 登録日 2009-04-30 公開日 2009-12-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity. J.Mol.Biol., 394, 2009
3H9S	The complex between TCR A6 and human Class I MHC HLA-A2 with the bound Tel1p peptide 分子名称: A6 TCR alpha chain, Beta-2-microglobulin, GLYCEROL, ... 著者 Borbulevych, O.Y, Baker, B.M. 登録日 2009-04-30 公開日 2010-01-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 T cell receptor cross-reactivity directed by antigen-dependent tuning of peptide-MHC molecular flexibility. Immunity, 31, 2009
3GPO	Crystal structure of macro domain of Chikungunya virus in complex with ADP-ribose 分子名称: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein 3 著者 Malet, H, Jamal, S, Coutard, B, Canard, B. 登録日 2009-03-23 公開日 2009-07-21 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket J.Virol., 83, 2009
3GQ8	Crystal Structure of the Bacteriophage phi29 gene product 12 N-terminal fragment in complex with 2-(N-cyclohexylamino)ethane sulfonic acid (CHES) 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, CARBONATE ION, ... 著者 Xiang, Y, Rossmann, M.G. 登録日 2009-03-24 公開日 2009-05-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike. Mol.Cell, 34, 2009
3GP1	MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-V222P complex 分子名称: 5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*CP**C)-3', 5'-D(P*TP*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3', DNA glycosylase, ... 著者 Spong, M.C, Qi, Y, Verdine, G.L. 登録日 2009-03-20 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme Nature, 462, 2009
3HAN	Crystal structure of bacteriorhodopsin mutant V49A crystallized from bicelles 分子名称: Bacteriorhodopsin, RETINAL 著者 Joh, N.H, Yang, D, Bowie, J.U. 登録日 2009-05-02 公開日 2009-09-22 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Similar energetic contributions of packing in the core of membrane and water-soluble proteins. J.Am.Chem.Soc., 131, 2009
3GQ0	The structure of the Caulobacter crescentus clpS protease adaptor protein - apo structure with no peptide 分子名称: ATP-dependent Clp protease adapter protein clpS 著者 Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A. 登録日 2009-03-23 公開日 2009-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.066 Å) 主引用文献 Molecular basis of substrate selection by the N-end rule adaptor protein ClpS. Proc.Natl.Acad.Sci.USA, 106, 2009
3GQA	Crystal Structure of the Bacteriophage phi29 gene product 12 N-terminal fragment in complex with cobalt ions 分子名称: COBALT (II) ION, PHOSPHATE ION, Preneck appendage protein 著者 Xiang, Y, Rossmann, M.G. 登録日 2009-03-24 公開日 2009-05-26 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike. Mol.Cell, 34, 2009
3GR2	AmpC beta-lactamase in complex with Fragment-based Inhibitor 分子名称: 4-ethyl-5-methyl-2-(1H-tetrazol-5-yl)-1,2-dihydro-3H-pyrazol-3-one, Beta-lactamase 著者 Teotico, D.T, Shoichet, B.K. 登録日 2009-03-24 公開日 2009-04-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Docking for fragment inhibitors of AmpC beta-lactamase Proc.Natl.Acad.Sci.USA, 106, 2009

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