PDB: 19260 件ウェブページステータス検索Chemie searchBIRD

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3HZM	Crystal structure of S73-2 antibody in complex with antigen Kdo 分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, MAGNESIUM ION, S73-2 Fab (IgG1k) heavy chain, ... 著者 Brooks, C.L, Muller-Loennies, S, Borisova, S.N, Brade, L, Kosma, P, Hirama, T, MacKenzie, C.R, Brade, H, Evans, S.V. 登録日 2009-06-23 公開日 2010-01-12 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Antibodies raised against chlamydial lipopolysaccharide antigens reveal convergence in germline gene usage and differential epitope recognition Biochemistry, 49, 2010
3HY1	Crystal Structure of catalytic fragment of E. coli AlaRS G237A in complex with SerSA 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-HYDROXYETHYL DISULFIDE, 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, ... 著者 Guo, M, Yang, X.-L, Schimmel, P. 登録日 2009-06-22 公開日 2009-12-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma. Nature, 462, 2009
3HZU	Crystal structure of probable thiosulfate sulfurtransferase SSEA (rhodanese) from Mycobacterium tuberculosis 分子名称: GLYCEROL, SULFATE ION, Thiosulfate sulfurtransferase sseA 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-06-24 公開日 2009-07-07 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Mycobacterium thermoresistibile as a source of thermostable orthologs of Mycobacterium tuberculosis proteins. Protein Sci., 21, 2012
3HYP	Crystal structure of Bacteroides fragilis TrxP_S105G mutant 分子名称: Thioredoxin, ZINC ION 著者 Shouldice, S.R. 登録日 2009-06-22 公開日 2010-01-12 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.899 Å) 主引用文献 In vivo oxidative protein folding can be facilitated by oxidation-reduction cycling Mol.Microbiol., 75, 2010
3I06	Crystal structure of cruzain covalently bound to a purine nitrile 分子名称: 6-[(3,5-difluorophenyl)amino]-9-ethyl-9H-purine-2-carbonitrile, Cruzipain 著者 Ferreira, R.S, Shoichet, B.K, McKerrow, J.H. 登録日 2009-06-24 公開日 2009-12-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Identification and optimization of inhibitors of trypanosomal cysteine proteases: cruzain, rhodesain, and TbCatB. J.Med.Chem., 53, 2010
3I0F	Crystal structure of GTB C80S/C196S + UDP + H antigen 分子名称: ABO glycosyltransferase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ... 著者 Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V. 登録日 2009-06-25 公開日 2010-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding J.Mol.Biol., 402, 2010
3HZT	Crystal structure of Toxoplasma gondii CDPK3, TGME49_105860 分子名称: 5-[(E)-(5-CHLORO-2-OXO-1,2-DIHYDRO-3H-INDOL-3-YLIDENE)METHYL]-N-[2-(DIETHYLAMINO)ETHYL]-2,4-DIMETHYL-1H-PYRROLE-3-CARBOXAMIDE, Calcium-dependent protein kinase 3, GLYCEROL, ... 著者 Wernimont, A.K, Artz, J.D, Finnerty, P, Wasney, G, Allali-Hassani, A, Vedadi, M, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Amani, M, Structural Genomics Consortium (SGC) 登録日 2009-06-24 公開日 2009-07-21 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structures of apicomplexan calcium-dependent protein kinases reveal mechanism of activation by calcium. Nat.Struct.Mol.Biol., 17, 2010
3I15	Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 fully oxidized 分子名称: Beta-lactamase 2, COBALT (II) ION 著者 Gonzalez, J.M, Buschiazzo, A, Vila, A.J. 登録日 2009-06-25 公開日 2009-12-29 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases . Biochemistry, 49, 2010
3I0D	Crystal structure of GTB C80S/C196S + UDP 分子名称: ABO glycosyltransferase, URIDINE-5'-DIPHOSPHATE 著者 Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V. 登録日 2009-06-25 公開日 2010-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding J.Mol.Biol., 402, 2010
3I0I	Crystal structure of GTB C80S/C196S/C209S + UDP 分子名称: ABO glycosyltransferase, URIDINE-5'-DIPHOSPHATE 著者 Schuman, B, Persson, M, Landry, R.C, Polakowski, R, Weadge, J.T, Seto, N.O.L, Borisova, S, Palcic, M.M, Evans, S.V. 登録日 2009-06-25 公開日 2010-08-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Cysteine-to-serine mutants dramatically reorder the active site of human ABO(H) blood group B glycosyltransferase without affecting activity: structural insights into cooperative substrate binding J.Mol.Biol., 402, 2010
3I0W	Crystal structure of Clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in complex with dsDNA containing cytosine opposite to 8-oxoG 分子名称: 1,2-ETHANEDIOL, 5'-D(*AP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*A)-3', ... 著者 Faucher, F, Doublie, S. 登録日 2009-06-25 公開日 2009-09-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Structural basis for the lack of opposite base specificity of Clostridium acetobutylicum 8-oxoguanine DNA glycosylase. Dna Repair, 8, 2009
3I2D	Crystal Structure of S. Cerevisiae SUMO E3 Ligase SIZ1 分子名称: E3 SUMO-protein ligase SIZ1, ZINC ION 著者 Lima, C.D, Yunus, A.A. 登録日 2009-06-29 公開日 2009-09-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of the Siz/PIAS SUMO E3 ligase Siz1 and determinants required for SUMO modification of PCNA. Mol.Cell, 35, 2009
3I1I	X-ray crystal structure of homoserine O-acetyltransferase from Bacillus anthracis 分子名称: ACETATE ION, GLYCEROL, Homoserine O-acetyltransferase, ... 著者 Osipiuk, J, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2009-06-26 公開日 2009-07-07 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 X-ray crystal structure of homoserine O-acetyltransferase from Bacillus anthracis. To be published
3GBB	X-ray structure of iGluR5 ligand-binding core (S1S2) in complex with MSVIII-19 at 2.10A resolution 分子名称: (2R,3aR,7aR)-2-[(2S)-2-amino-3-hydroxy-3-oxo-propyl]-3,3a,5,6,7,7a-hexahydrofuro[4,5-b]pyran-2-carboxylic acid, Glutamate receptor, ionotropic kainate 1 著者 Frydenvang, K, Naur, P, Gajhede, M, Kastrup, J.S. 登録日 2009-02-19 公開日 2009-03-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Full Domain Closure of the Ligand-binding Core of the Ionotropic Glutamate Receptor iGluR5 Induced by the High Affinity Agonist Dysiherbaine and the Functional Antagonist 8,9-Dideoxyneodysiherbaine J.Biol.Chem., 284, 2009
3GIJ	Dpo4 extension ternary complex with oxoG(syn)-A(anti) and oxoG(anti)-A(syn) pairs 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*CP*TP*AP*AP*CP*(8OG)P*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*C)-3', 5'-D(*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*GP*(2DA))-3', ... 著者 Rechkoblit, O, Malinina, L, Patel, D.J. 登録日 2009-03-05 公開日 2009-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Impact of conformational heterogeneity of OxoG lesions and their pairing partners on bypass fidelity by Y family polymerases. Structure, 17, 2009
3G7P	Crystal structure of a nifx-associated protein of unknown function (afe_1514) from acidithiobacillus ferrooxidans atcc at 2.00 A resolution 分子名称: 1,2-ETHANEDIOL, 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, Nitrogen fixation protein, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2009-02-10 公開日 2009-03-03 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of NifX-associated protein of unknown function (YP_002425942.1) from Acidithiobacillus ferrooxidans ATCC 23270 at 2.00 A resolution To be published
3G81	Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with alpha methyl mannoside 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, methyl alpha-D-mannopyranoside 著者 Head, J.F. 登録日 2009-02-11 公開日 2009-03-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Recognition of mannosylated ligands and influenza A virus by human surfactant protein D: contributions of an extended site and residue 343. Biochemistry, 48, 2009
3GF4	Structure of UDP-galactopyranose mutase bound to UDP-glucose 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, UDP-galactopyranose mutase, URIDINE-5'-DIPHOSPHATE-GLUCOSE, ... 著者 Gruber, T.D, Borrok, M.J, Kiessling, L.L, Forest, K.T. 登録日 2009-02-26 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Ligand binding and substrate discrimination by UDP-galactopyranose mutase. J.Mol.Biol., 391, 2009
3GFQ	Structure of YhdA, K109L variant 分子名称: FLAVIN MONONUCLEOTIDE, FMN-dependent NADPH-azoreductase 著者 Staunig, N, Gruber, K. 登録日 2009-02-27 公開日 2009-09-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.996 Å) 主引用文献 A single intersubunit salt bridge affects oligomerization and catalytic activity in a bacterial quinone reductase Febs J., 276, 2009
3GG5	Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability 分子名称: PHOSPHATE ION, SULFATE ION, Thymidylate synthase 著者 Huang, X, Gibson, L.M, Bell, B.J, Lovelace, L.L, Lebioda, L. 登録日 2009-02-27 公開日 2010-03-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability . Biochemistry, 49, 2010
3G9Y	Crystal structure of the second zinc finger from ZRANB2/ZNF265 bound to 6 nt ssRNA sequence AGGUAA 分子名称: RNA (5'-R(*AP*GP*GP*UP*AP*A)-3'), ZINC ION, Zinc finger Ran-binding domain-containing protein 2 著者 Loughlin, F.E, McGrath, A.P, Lee, M, Guss, J.M, Mackay, J.P. 登録日 2009-02-15 公開日 2009-03-03 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 The zinc fingers of the SR-like protein ZRANB2 are single-stranded RNA-binding domains that recognize 5' splice site-like sequences Proc.Natl.Acad.Sci.USA, 106, 2009
3GGY	Crystal Structure of S.cerevisiae Ist1 N-terminal domain 分子名称: Increased sodium tolerance protein 1 著者 Xiao, J, Xu, Z. 登録日 2009-03-02 公開日 2009-09-08 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis of Ist1 function and Ist1-Did2 interaction in the multivesicular body pathway and cytokinesis. MOLECULAR BIOLOGY OF THE CELL, 20, 2009
3GAE	Crystal Structure of PUL 分子名称: CHLORIDE ION, GLYCEROL, Protein DOA1 著者 Zhao, G, Schindelin, H, Lennarz, W.J. 登録日 2009-02-17 公開日 2009-12-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 An Armadillo motif in Ufd3 interacts with Cdc48 and is involved in ubiquitin homeostasis and protein degradation Proc.Natl.Acad.Sci.USA, 106, 2009
3GAN	Crystal structure of gene product from Arabidopsis thaliana At3g22680 with bound suramin 分子名称: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID, CHLORIDE ION, Uncharacterized protein At3g22680 著者 Burgie, E.S, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG) 登録日 2009-02-17 公開日 2009-03-03 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of gene product from Arabidopsis thaliana At3g22680 with bound suramin To be Published
3GHZ	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Salmonella typhimurium 分子名称: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, GLYCEROL, MAGNESIUM ION, ... 著者 Osipiuk, J, Gu, M, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2009-03-04 公開日 2009-03-17 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 X-ray crystal structure of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase from Salmonella typhimurium. To be Published

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