PDB: 2824 件ウェブページステータス検索Chemie searchBIRD

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1MEE	THE COMPLEX BETWEEN THE SUBTILISIN FROM A MESOPHILIC BACTERIUM AND THE LEECH INHIBITOR EGLIN-C 分子名称: CALCIUM ION, EGLIN C, MESENTERICOPEPTIDASE 著者 Dauter, Z, Betzel, C, Wilson, K.S. 登録日 1991-04-15 公開日 1992-10-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Complex between the subtilisin from a mesophilic bacterium and the leech inhibitor eglin-C. Acta Crystallogr.,Sect.B, 47, 1991
1QBI	SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE FROM ACINETOBACTER CALCOACETICUS 分子名称: CALCIUM ION, GLYCEROL, PLATINUM (II) ION, ... 著者 Oubrie, A, Rozeboom, H.J, Kalk, K.H, Duine, J.A, Dijkstra, B.W. 登録日 1999-04-22 公開日 2000-02-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 The 1.7 A crystal structure of the apo form of the soluble quinoprotein glucose dehydrogenase from Acinetobacter calcoaceticus reveals a novel internal conserved sequence repeat. J.Mol.Biol., 289, 1999
3TEC	CALCIUM BINDING TO THERMITASE. CRYSTALLOGRAPHIC STUDIES OF THERMITASE AT 0, 5 AND 100 MM CALCIUM 分子名称: CALCIUM ION, EGLIN C, THERMITASE 著者 Gros, P, Kalk, K.H, Hol, W.G.J. 登録日 1990-10-26 公開日 1992-01-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Calcium binding to thermitase. Crystallographic studies of thermitase at 0, 5, and 100 mM calcium. J.Biol.Chem., 266, 1991
1CRU	SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE FROM ACINETOBACTER CALCOACETICUS IN COMPLEX WITH PQQ AND METHYLHYDRAZINE 分子名称: CALCIUM ION, GLYCEROL, METHYLHYDRAZINE, ... 著者 Oubrie, A, Rozeboom, H.J, Dijkstra, B.W. 登録日 1999-08-16 公開日 2000-03-01 最終更新日 2017-10-04 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Active-site structure of the soluble quinoprotein glucose dehydrogenase complexed with methylhydrazine: a covalent cofactor-inhibitor complex. Proc.Natl.Acad.Sci.USA, 96, 1999
1C9U	CRYSTAL STRUCTURE OF THE SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE IN COMPLEX WITH PQQ 分子名称: CALCIUM ION, GLYCEROL, PYRROLOQUINOLINE QUINONE, ... 著者 Oubrie, A, Rozeboom, H.J, Dijkstra, B.W. 登録日 1999-08-03 公開日 2000-02-04 最終更新日 2019-08-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure and mechanism of soluble quinoprotein glucose dehydrogenase. EMBO J., 18, 1999
1CQ1	Soluble Quinoprotein Glucose Dehydrogenase from Acinetobacter Calcoaceticus in Complex with PQQH2 and Glucose 分子名称: CALCIUM ION, PYRROLOQUINOLINE QUINONE, SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE, ... 著者 Oubrie, A, Rozeboom, H.J, Dijkstra, B.W. 登録日 1999-08-04 公開日 2000-02-04 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure and mechanism of soluble quinoprotein glucose dehydrogenase. EMBO J., 18, 1999
1ECE	ACIDOTHERMUS CELLULOLYTICUS ENDOCELLULASE E1 CATALYTIC DOMAIN IN COMPLEX WITH A CELLOTETRAOSE 分子名称: ENDOCELLULASE E1, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose 著者 Sakon, J, Thomas, S.R, Himmel, M.E, Karplus, P.A. 登録日 1996-04-04 公開日 1996-10-14 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of thermostable family 5 endocellulase E1 from Acidothermus cellulolyticus in complex with cellotetraose. Biochemistry, 35, 1996
6R8E	SC14 G-hairpin 分子名称: DNA (5'-D(*GP*TP*GP*TP*GP*TP*GP*GP*GP*TP*GP*TP*GP*T)-3') 著者 Lenarcic Zivkovic, M, Trantirek, L, Plavec, J. 登録日 2019-04-01 公開日 2021-02-03 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Insight into formation propensity of pseudocircular DNA G-hairpins. Nucleic Acids Res., 49, 2021
1TEC	CRYSTALLOGRAPHIC REFINEMENT BY INCORPORATION OF MOLECULAR DYNAMICS. THE THERMOSTABLE SERINE PROTEASE THERMITASE COMPLEXED WITH EGLIN-C 分子名称: CALCIUM ION, EGLIN C, SODIUM ION, ... 著者 Gros, P, Dijkstra, B.W, Hol, W.G.J. 登録日 1989-05-24 公開日 1989-10-15 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystallographic refinement by incorporation of molecular dynamics: thermostable serine protease thermitase complexed with eglin c. Acta Crystallogr.,Sect.B, 45, 1989
1SIB	REFINED CRYSTAL STRUCTURES OF SUBTILISIN NOVO IN COMPLEX WITH WILD-TYPE AND TWO MUTANT EGLINS. COMPARISON WITH OTHER SERINE PROTEINASE INHIBITOR COMPLEXES 分子名称: CALCIUM ION, EGLIN C, SUBTILISIN NOVO BPN' 著者 Gruetter, M.G, Heinz, D.W, Priestle, J.P. 登録日 1993-08-02 公開日 1993-10-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Refined crystal structures of subtilisin novo in complex with wild-type and two mutant eglins. Comparison with other serine proteinase inhibitor complexes. J.Mol.Biol., 217, 1991
1VRX	Endocellulase e1 from acidothermus cellulolyticus mutant y245g 分子名称: ENDOCELLULASE E1 FROM A. CELLULOLYTICUS 著者 Baker, J.O, McCarley, J.R, Lovett, R, Yu, C.H, Adney, W.S, Rignall, T.R, Vinzant, T.B, Decker, S.R, Sakon, J, Himmel, M.E. 登録日 2005-06-30 公開日 2005-07-05 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Catalytically enhanced endocellulase Cel5A from Acidothermus cellulolyticus. Appl.Biochem.Biotechnol., 121-124, 2005
2YAZ	The Crystal Structure of Leishmania major dUTPase in complex dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DUTPASE, MAGNESIUM ION, ... 著者 Hemsworth, G.R, Moroz, O.V, Fogg, M.J, Scott, B, Bosch-Navarrete, C, Gonzalez-Pacanowska, D, Wilson, K.S. 登録日 2011-02-25 公開日 2011-03-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The Crystal Structure of the Leishmania Major Deoxyuridine Triphosphate Nucleotidohydrolase in Complex with Nucleotide Analogues, Dump, and Deoxyuridine. J.Biol.Chem., 286, 2011
2YAY	The Crystal Structure of Leishmania major dUTPase in complex with substrate analogue dUpNpp 分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, CALCIUM ION, DUTPASE 著者 Hemsworth, G.R, Moroz, O.V, Fogg, M.J, Scott, B, Bosch-Navarrete, C, Gonzalez-Pacanowska, D, Wilson, K.S. 登録日 2011-02-25 公開日 2011-03-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 The Crystal Structure of the Leishmania Major Deoxyuridine Triphosphate Nucleotidohydrolase in Complex with Nucleotide Analogues, Dump, and Deoxyuridine. J.Biol.Chem., 286, 2011
2YB0	The Crystal Structure of Leishmania major dUTPase in complex deoxyuridine 分子名称: 2'-DEOXYURIDINE, DUTPASE, SULFATE ION 著者 Hemsworth, G.R, Moroz, O.V, Fogg, M.J, Scott, B, Bosch-Navarrete, C, Gonzalez-Pacanowska, D, Wilson, K.S. 登録日 2011-02-25 公開日 2011-03-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 The Crystal Structure of the Leishmania Major Deoxyuridine Triphosphate Nucleotidohydrolase in Complex with Nucleotide Analogues, Dump, and Deoxyuridine. J.Biol.Chem., 286, 2011
2CJE	THE CRYSTAL STRUCTURE OF A COMPLEX OF Leishmania major DUTPASE WITH SUBSTRATE ANALOGUE DUPNHP 分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-DIPHOSPHATE, DUTPASE, MAGNESIUM ION 著者 Moroz, O.V, Fogg, M.J, Gonzalez-Pacanowska, D, Wilson, K.S. 登録日 2006-03-31 公開日 2007-04-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 The Crystal Structure of the Leishmania Major Deoxyuridine Triphosphate Nucleotidohydrolase in Complex with Nucleotide Analogues, Dump, and Deoxyuridine. J.Biol.Chem., 286, 2011
5CIB	Complex of yeast cytochrome c peroxidase (W191G) bound to 2,4-dimethylaniline with iso-1 cytochrome c 分子名称: 2,4-dimethylaniline, Cytochrome c iso-1, Cytochrome c peroxidase, ... 著者 Crane, B.R, Payne, T.M. 登録日 2015-07-11 公開日 2016-08-03 最終更新日 2021-03-10 実験手法 X-RAY DIFFRACTION (3.011 Å) 主引用文献 Constraints on the Radical Cation Center of Cytochrome c Peroxidase for Electron Transfer from Cytochrome c. Biochemistry, 55, 2016
4KQP	Crystal structure of Lactococcus lactis GlnP substrate binding domain 2 (SBD2) in complex with glutamine at 0.95 A resolution 分子名称: GLUTAMINE, Glutamine ABC transporter permease and substrate binding protein protein 著者 Vujicic Zagar, A, Guskov, A, Schuurman-Wolters, G.K, Slotboom, D.J, Poolman, B. 登録日 2013-05-15 公開日 2013-09-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Functional Diversity of Tandem Substrate-Binding Domains in ABC Transporters from Pathogenic Bacteria. Structure, 21, 2013
4KPT	Crystal structure of substrate binding domain 1 (SBD1) OF ABC transporter GLNPQ from lactococcus lactis 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, ... 著者 Vujicic Zagar, A, Guskov, A, Schuurman-Wolters, G.K, Slotboom, D.J, Poolman, B. 登録日 2013-05-14 公開日 2013-09-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Functional Diversity of Tandem Substrate-Binding Domains in ABC Transporters from Pathogenic Bacteria. Structure, 21, 2013
4KR5	Crystal structure of Lactococcus lactis GlnP substrate binding domain 2 (SBD2) in open conformation 分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ... 著者 Vujicic Zagar, A, Guskov, A, Schuurman-Wolters, G.K, Slotboom, D.J, Poolman, B. 登録日 2013-05-16 公開日 2013-09-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Functional Diversity of Tandem Substrate-Binding Domains in ABC Transporters from Pathogenic Bacteria. Structure, 21, 2013
7KUI	Cryo-EM structure of Rous sarcoma virus cleaved synaptic complex (CSC) with HIV-1 integrase strand transfer inhibitor MK-2048. CIC region of a cluster identified by 3-dimensional variability analysis in cryoSPARC. 分子名称: (6S)-2-(3-chloro-4-fluorobenzyl)-8-ethyl-10-hydroxy-N,6-dimethyl-1,9-dioxo-1,2,6,7,8,9-hexahydropyrazino[1',2':1,5]pyrrolo[2,3-d]pyridazine-4-carboxamide, DNA (5'-D(*AP*AP*TP*GP*TP*TP*GP*TP*CP*TP*TP*AP*TP*GP*CP*AP*AP*T)-3'), DNA (5'-D(*AP*TP*TP*GP*CP*AP*TP*AP*AP*GP*AP*CP*AP*AP*CP*A)-3'), ... 著者 Pandey, K.K, Bera, S, Shi, K, Aihara, H, Grandgenett, D.P. 登録日 2020-11-25 公開日 2021-03-17 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM structure of the Rous sarcoma virus octameric cleaved synaptic complex intasome. Commun Biol, 4, 2021
4U51	Crystal structure of Narciclasine bound to the yeast 80S ribosome 分子名称: (2S,3R,4S,4aR)-2,3,4,7-tetrahydroxy-3,4,4a,5-tetrahydro[1,3]dioxolo[4,5-j]phenanthridin-6(2H)-one, 18S ribosomal RNA, 25S ribosomal RNA, ... 著者 Garreau de Loubresse, N, Prokhorova, I, Yusupova, G, Yusupov, M. 登録日 2014-07-24 公開日 2014-10-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis for the inhibition of the eukaryotic ribosome. Nature, 513, 2014
8I4K	Structure of Azami Red1.0, a red fluorescent protein engineered from Azami Green 分子名称: Azami Red1.0, CALCIUM ION 著者 Otsubo, S, Takekawa, N, Imamura, H, Imada, K. 登録日 2023-01-19 公開日 2023-11-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Red fluorescent proteins engineered from green fluorescent proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
2BUR	Crystal Structure Of Wild-Type Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 in Complex with 4-hydroxybenzoate 分子名称: FE (III) ION, P-HYDROXYBENZOIC ACID, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ... 著者 Vetting, M.W, Valley, M.P, D'Argenio, D.A, Ornston, L.N, Lipscomb, J.D, Ohlendorf, D.H. 登録日 2005-06-17 公開日 2006-09-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase Annu.Rev.Microbiol., 58, 2004
6WBR	Crystal structure of AceCas9 bound with guide RNA and DNA with 5'-NNNCC-3' PAM 分子名称: CRISPR-associated endonuclease, Csn1 family,CRISPR-associated endonuclease, Csn1 family, ... 著者 Li, H, Das, A. 登録日 2020-03-27 公開日 2020-11-18 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.91 Å) 主引用文献 The molecular basis for recognition of 5'-NNNCC-3' PAM and its methylation state by Acidothermus cellulolyticus Cas9. Nat Commun, 11, 2020
2BUM	Crystal Structure Of Wild-Type Protocatechuate 3,4-Dioxygenase from Acinetobacter Sp. ADP1 分子名称: FE (III) ION, HYDROXIDE ION, PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN, ... 著者 Vetting, M.W, Valley, M.P, D'Argenio, D.A, Ornston, L.N, Lipscomb, J.D, Ohlendorf, D.H. 登録日 2005-06-14 公開日 2006-09-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Biophysical Analyses of Designed and Selected Mutants of Protocatechuate 3,4-Dioxygenase Annu.Rev.Microbiol., 58, 2004

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