Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9CMH
DownloadVisualize
BU of 9cmh by Molmil
Cryo-EM structure of human claudin-4 complex with Clostridium perfringens enterotoxin
分子名称: Claudin-4, Heat-labile enterotoxin B chain
著者Vecchio, A.J.
登録日2024-07-15
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM Structures of Clostridium perfringens Enterotoxin Bound to its Human Receptor, Claudin-4
To Be Published
9EM6
DownloadVisualize
BU of 9em6 by Molmil
OPR3 variant Y364P in its dimeric form obtained without ammonium sulfate
分子名称: 12-oxophytodienoate reductase 3, FLAVIN MONONUCLEOTIDE
著者Bijelic, A, Macheroux, P, Kerschbaumer, B.
登録日2024-03-07
公開日2024-08-14
最終更新日2024-08-21
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
9EQM
DownloadVisualize
BU of 9eqm by Molmil
Crystal structure of pVHL:EloB:EloC in complex with MP-1-21
分子名称: (2S,4R)-1-[(2R)-2-[(1-fluoranylcyclopropyl)carbonylamino]-3-methyl-3-[[trans-4-(morpholin-4-ylmethyl)cyclohexyl]methylsulfanyl]butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
著者Kroupova, A, Pierri, M, Liu, X, Ciulli, A.
登録日2024-03-21
公開日2024-08-28
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Stereochemical inversion at a 1,4-cyclohexyl PROTAC linker fine-tunes conformation and binding affinity.
Bioorg.Med.Chem.Lett., 110, 2024
9EYW
DownloadVisualize
BU of 9eyw by Molmil
Human PRMT5 in complex with AZ compound 21
分子名称: (3~{S})-2-[(5-azanyl-1~{H}-pyrrolo[3,2-b]pyridin-2-yl)methyl]-6-fluoranyl-1'-[(4-fluorophenyl)methyl]spiro[isoindole-3,3'-pyrrolidine]-1,2'-dione, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein WDR77, ...
著者Debreczeni, J.
登録日2024-04-09
公開日2024-08-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery and In Vivo Efficacy of AZ-PRMT5i-1, a Novel PRMT5 Inhibitor with High MTA Cooperativity.
J.Med.Chem., 67, 2024
9CBS
DownloadVisualize
BU of 9cbs by Molmil
Crystal structure of Chaetomium thermophilum Gcn2 HisRS-like domain, catalytic domain
分子名称: non-specific serine/threonine protein kinase
著者Zhang, J.
登録日2024-06-20
公開日2024-08-21
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Gcn2 structurally mimics and functionally repurposes the HisRS enzyme for the integrated stress response.
Proc.Natl.Acad.Sci.USA, 121, 2024
9FST
DownloadVisualize
BU of 9fst by Molmil
Yeast 20S proteasome with human beta1i (1-51) in complex with epoxyketone inhibitor LU-001i
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S.
登録日2024-06-21
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites
To Be Published
9ATN
DownloadVisualize
BU of 9atn by Molmil
NMR structure of the MLL4 PHD2/3 fingers in complex with ASXL2
分子名称: Histone-lysine N-methyltransferase 2D, Polycomb group protein ASXL2, ZINC ION
著者Zhang, Y, Zandian, M, Kutateladze, T.
登録日2024-02-27
公開日2024-06-19
実験手法SOLUTION NMR
主引用文献ASXLs binding to the PHD2/3 fingers of MLL4 provides a mechanism for the recruitment of BAP1 to active enhancers.
Nat Commun, 15, 2024
9BB6
DownloadVisualize
BU of 9bb6 by Molmil
Backbone Modification in the GA Module of Protein PAB: ACPC residues at positions 5 and 13, beta3 residue at position 9
分子名称: Peptostreptococcal albumin-binding protein
著者Lin, Y, Horne, W.S.
登録日2024-04-05
公開日2024-06-05
最終更新日2024-08-21
実験手法SOLUTION NMR
主引用文献Backbone Modification in a Protein Hydrophobic Core.
Chemistry, 30, 2024
9HVP
DownloadVisualize
BU of 9hvp by Molmil
Design, activity and 2.8 Angstroms crystal structure of a C2 symmetric inhibitor complexed to HIV-1 protease
分子名称: HIV-1 Protease, benzyl [(1R,4S,6S,9R)-4,6-dibenzyl-5-hydroxy-1,9-bis(1-methylethyl)-2,8,11-trioxo-13-phenyl-12-oxa-3,7,10-triazatridec-1-yl]carbamate
著者Neidhart, D.J, Erickson, J.
登録日1990-11-06
公開日1992-04-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Design, activity, and 2.8 A crystal structure of a C2 symmetric inhibitor complexed to HIV-1 protease.
Science, 249, 1990
9EVQ
DownloadVisualize
BU of 9evq by Molmil
Crystal structure of the kinetoplastid kinetochore protein KKT23 acetyltransferase domain from Trypanosoma brucei
分子名称: ACETYL COENZYME *A, N-acetyltransferase domain-containing protein
著者Ludzia, P, Ishii, M, Akiyoshi, B.
登録日2024-04-01
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The kinetoplastid kinetochore protein KKT23 acetyltransferase is a structural homolog of GCN5 that acetylates the histone H2A C-terminal tail
Biorxiv, 2024
9FBF
DownloadVisualize
BU of 9fbf by Molmil
VDR complex with UG-481
分子名称: (1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-7~{a}-methyl-1-[(1~{S})-5-methyl-1-[(1~{R},2~{R})-2-(3-methyl-3-oxidanyl-butyl)cyclopropyl]-5-oxidanyl-hexyl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol, Nuclear receptor coactivator 1, Vitamin D3 receptor A
著者Rochel, N.
登録日2024-05-13
公開日2024-06-19
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Design, Synthesis, and Biological Evaluation of New Type of Gemini Analogues with a Cyclopropane Moiety in Their Side Chain.
J.Med.Chem., 67, 2024
9FCE
DownloadVisualize
BU of 9fce by Molmil
BelI in complex with SAM from Streptomyces sp. UCK14
分子名称: (R,R)-2,3-BUTANEDIOL, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
登録日2024-05-15
公開日2024-08-21
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
9CL9
DownloadVisualize
BU of 9cl9 by Molmil
WT 12C IM fraction, B-b3 with RluB bound
分子名称: 23S rRNA, Large ribosomal subunit protein bL20, Large ribosomal subunit protein bL21, ...
著者Lee, J, Sheng, K, Williamson, J.R.
登録日2024-07-10
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (5.04 Å)
主引用文献50S ribosome assembly intermediates at low temperature reveal bound RluB
To Be Published
9BJ0
DownloadVisualize
BU of 9bj0 by Molmil
Crystal structure of the periplasmic domain of IgaA from Escherichia coli
分子名称: Intracellular growth attenuator protein igaA
著者Watanabe, N, Savchenko, A, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2024-04-24
公開日2024-07-17
最終更新日2024-09-25
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Molecular insights into the initiation step of the Rcs signaling pathway.
Structure, 32, 2024
9BB5
DownloadVisualize
BU of 9bb5 by Molmil
Backbone Modification in the GA Module of Protein PAB: ACPC residues at positions 22 and 26
分子名称: Peptostreptococcal albumin-binding protein
著者Lin, Y, Horne, W.S.
登録日2024-04-05
公開日2024-06-05
最終更新日2024-08-21
実験手法SOLUTION NMR
主引用文献Backbone Modification in a Protein Hydrophobic Core.
Chemistry, 30, 2024
9FCS
DownloadVisualize
BU of 9fcs by Molmil
CysG(N-16)-H122N mutant in complex with SAH from Kitasatospora cystarginea
分子名称: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
著者Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
登録日2024-05-15
公開日2024-08-21
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
9B6E
DownloadVisualize
BU of 9b6e by Molmil
Cryo-EM structure of the mouse TRPM8 channel in complex with the antagonist TC-I 2014
分子名称: 3-{7-(trifluoromethyl)-5-[2-(trifluoromethyl)phenyl]-1H-benzimidazol-2-yl}-1-oxa-2-azaspiro[4.5]dec-2-ene, CHOLESTEROL HEMISUCCINATE, Transient receptor potential cation channel subfamily M member 8
著者Yin, Y, Park, C.-G, Zhang, F, Fedor, J, Feng, S, Suo, Y, Im, W, Lee, S.-Y.
登録日2024-03-25
公開日2024-08-21
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Mechanisms of sensory adaptation and inhibition of the cold and menthol receptor TRPM8.
Sci Adv, 10, 2024
9CV0
DownloadVisualize
BU of 9cv0 by Molmil
Bufavirus 1 at pH 7.4
分子名称: VP1
著者Gulkis, M.C, McKenna, R, Bennett, A.D.
登録日2024-07-27
公開日2024-08-28
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (2.84 Å)
主引用文献Structural Characterization of Human Bufavirus 1: Receptor Binding and Endosomal pH-Induced Changes.
Viruses, 16, 2024
9AZJ
DownloadVisualize
BU of 9azj by Molmil
Structure of ubiquitinated NEMO UBAN K285C-Ub G76C bound to HOIP NZF1
分子名称: E3 ubiquitin-protein ligase RNF31, NF-kappa-B essential modulator, Ubiquitin, ...
著者Michel, M.A, Scutts, S, Komander, D.
登録日2024-03-11
公開日2024-07-31
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献Structure of TAB2 NZF domain bound to K6 / Lys6-linked diubiquitin
To be published
7AR5
DownloadVisualize
BU of 7ar5 by Molmil
Structure of apo SARS-CoV-2 Main Protease with small beta angle, space group C2.
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE
著者Guenther, S, Reinke, P, Oberthuer, D, Yefanov, O, Gelisio, L, Ginn, H, Lieske, J, Domaracky, M, Brehm, W, Rahmani Mashour, A, White, T.A, Knoska, J, Pena Esperanza, G, Koua, F, Tolstikova, A, Groessler, M, Fischer, P, Hennicke, V, Fleckenstein, H, Trost, F, Galchenkova, M, Gevorkov, Y, Li, C, Awel, S, Paulraj, L.X, Ullah, N, Andaleeb, H, Werner, N, Falke, S, Hinrichs, W, Alves Franca, B, Schwinzer, M, Brognaro, H, Perbandt, M, Tidow, H, Seychell, B, Beck, T, Meier, S, Doyle, J.J, Giseler, H, Melo, D, Dunkel, I, Lane, T.J, Peck, A, Saouane, S, Hakanpaeae, J, Meyer, J, Noei, H, Boger, J, Gribbon, P, Ellinger, B, Kuzikov, M, Wolf, M, Zhang, L, Ehrt, C, Pletzer-Zelgert, J, Wollenhaupt, J, Feiler, C, Weiss, M, Schulz, E.C, Mehrabi, P, Norton-Baker, B, Schmidt, C, Lorenzen, K, Schubert, R, Han, H, Chari, A, Fernandez Garcia, Y, Turk, D, Hilgenfeld, R, Rarey, M, Zaliani, A, Chapman, H.N, Pearson, A, Betzel, C, Meents, A.
登録日2020-10-23
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献X-ray screening identifies active site and allosteric inhibitors of SARS-CoV-2 main protease.
Science, 372, 2021
9AZB
DownloadVisualize
BU of 9azb by Molmil
Crystal structure of LolTv5
分子名称: Aminotransferase, class V/Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE
著者Gao, J, Hai, Y.
登録日2024-03-11
公開日2024-07-17
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Enzymatic Synthesis of Unprotected alpha , beta-Diamino Acids via Direct Asymmetric Mannich Reactions.
J.Am.Chem.Soc., 146, 2024
9EU6
DownloadVisualize
BU of 9eu6 by Molmil
The FK1 domain of FKBP51 in complex with SAFit-analog 23j
分子名称: (1,5-dimethylpyrazol-4-yl)methyl (2~{S})-1-[(2~{S})-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5
著者Meyners, C, Buffa, V, Hausch, F.
登録日2024-03-27
公開日2024-06-12
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献1,4-Pyrazolyl-Containing SAFit-Analogues are Selective FKBP51 Inhibitors With Improved Ligand Efficiency and Drug-Like Profile.
Chemmedchem, 19, 2024
9AUM
DownloadVisualize
BU of 9aum by Molmil
Structure of SARS-CoV-2 Mpro mutant (T21I,S144A,T304I) in complex with Nirmatrelvir (PF-07321332)
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Gajiwala, K.S, Greasley, S.E, Ferre, R.A, Liu, W, Stewart, A.E.
登録日2024-02-29
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.539 Å)
主引用文献In vitro selection and analysis of SARS-CoV-2 nirmatrelvir resistance mutations contributing to clinical virus resistance surveillance.
Sci Adv, 10, 2024
9BRT
DownloadVisualize
BU of 9brt by Molmil
Intact V-ATPase State 1 and synaptophysin complex in mouse brain isolated synaptic vesicles
分子名称: Renin receptor cytoplasmic fragment, Ribonuclease kappa, Synaptophysin, ...
著者Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T.
登録日2024-05-11
公開日2024-06-19
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structure and topography of the synaptic V-ATPase-synaptophysin complex.
Nature, 631, 2024
7ASS
DownloadVisualize
BU of 7ass by Molmil
OXA-48_L67F_CAZ. What Doesnt Kill You Makes You Stronger: Sub-MIC Selection Drives Cryptic Evolution of OXA-48
分子名称: Beta-lactamase, CHLORIDE ION, hydrolyzed ceftazidime
著者Frohlich, C, Leiros, H.-K.S.
登録日2020-10-28
公開日2020-12-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Cryptic beta-Lactamase Evolution Is Driven by Low beta-Lactam Concentrations.
Msphere, 6, 2021

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon