PDB: 7386 件ウェブページステータス検索Chemie searchBIRD

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5NO3	RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate without uS3) 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Lopez-Alonso, J.P, Kaminishi, T, Kikuchi, T, Hirata, Y, Iturrioz, I, Dhimole, N, Schedlbauer, A, Hase, Y, Goto, S, Kurita, D, Muto, A, Zhou, S, Naoe, C, Mills, D.J, Gil-Carton, D, Takemoto, C, Himeno, H, Fucini, P, Connell, S.R. 登録日 2017-04-10 公開日 2017-05-31 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (5.16 Å) 主引用文献 RsgA couples the maturation state of the 30S ribosomal decoding center to activation of its GTPase pocket. Nucleic Acids Res., 45, 2017
5NO4	RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate with uS3) 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Lopez-Alonso, J.P, Kaminishi, T, Kikuchi, T, Hirata, Y, Iturrioz, I, Dhimole, N, Schedlbauer, A, Hase, Y, Goto, S, Kurita, D, Muto, A, Zhou, S, Naoe, C, Mills, D.J, Gil-Carton, D, Takemoto, C, Himeno, H, Fucini, P, Connell, S.R. 登録日 2017-04-10 公開日 2017-05-31 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (5.16 Å) 主引用文献 RsgA couples the maturation state of the 30S ribosomal decoding center to activation of its GTPase pocket. Nucleic Acids Res., 45, 2017
5NO2	RsgA-GDPNP bound to the 30S ribosomal subunit (RsgA assembly intermediate) 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Lopez-Alonso, J.P, Kaminishi, T, Kikuchi, T, Hirata, Y, Iturrioz, I, Dhimole, N, Schedlbauer, A, Hase, Y, Goto, S, Kurita, D, Muto, A, Zhou, S, Naoe, C, Mills, D.J, Gil-Carton, D, Takemoto, C, Himeno, H, Fucini, P, Connell, S.R. 登録日 2017-04-10 公開日 2017-05-24 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (5.16 Å) 主引用文献 RsgA couples the maturation state of the 30S ribosomal decoding center to activation of its GTPase pocket. Nucleic Acids Res., 45, 2017
1FEU	CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN TL5, ONE OF THE CTC FAMILY PROTEINS, COMPLEXED WITH A FRAGMENT OF 5S RRNA. 分子名称: 19 NT FRAGMENT OF 5S RRNA, 21 NT FRAGMENT OF 5S RRNA, 50S RIBOSOMAL PROTEIN L25, ... 著者 Fedorov, R.V, Meshcheryakov, V.A, Gongadze, G.M, Fomenkova, N.P, Nevskaya, N.A, Selmer, M, Laurberg, M, Kristensen, O, Al-Karadaghi, S, Liljas, A, Garber, M.B, Nikonov, S.V. 登録日 2000-07-23 公開日 2001-06-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of ribosomal protein TL5 complexed with RNA provides new insights into the CTC family of stress proteins. Acta Crystallogr.,Sect.D, 57, 2001
1NE3	Solution structure of ribosomal protein S28E from Methanobacterium Thermoautotrophicum. Ontario Centre for Structural Proteomics target MTH0256_1_68; Northeast Structural Genomics Target TT744 分子名称: 30S ribosomal protein S28E 著者 Wu, B, Pineda-Lucena, A, Yee, A, Cort, J.R, Ramelot, T.A, Kennedy, M, Edwards, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG) 登録日 2002-12-10 公開日 2003-12-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of ribosomal protein S28E from Methanobacterium thermoautotrophicum. Protein Sci., 12, 2003
3BNL	Crystal structure of the bacterial ribosomal decoding A site in the presence of [Co(NH3)6]Cl3 分子名称: A site of bacterial ribosome, COBALT HEXAMMINE(III) 著者 Kondo, J, Westhof, E. 登録日 2007-12-14 公開日 2008-06-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.602 Å) 主引用文献 The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res., 36, 2008
3BNT	Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the Presence of [Co(NH3)6]Cl3 (A1555G mutant, Br-derivative) 分子名称: A site of human mitochondrial ribosome, COBALT HEXAMMINE(III), SODIUM ION 著者 Kondo, J, Westhof, E. 登録日 2007-12-14 公開日 2008-06-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res., 36, 2008
3BNN	Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site 分子名称: A site of human ribosome 著者 Kondo, J, Westhof, E. 登録日 2007-12-14 公開日 2008-06-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res., 36, 2008
3BNO	Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (Br-derivative) 分子名称: A site of human mitochondrial ribosome 著者 Kondo, J, Westhof, E. 登録日 2007-12-14 公開日 2008-06-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res., 36, 2008
1QXF	SOLUTION STRUCTURE OF 30S RIBOSOMAL PROTEIN S27E FROM ARCHAEOGLOBUS FULGIDUS: GR2, A NESG TARGET PROTEIN 分子名称: 30S RIBOSOMAL PROTEIN S27E 著者 Herve Du Penhoat, C, Atreya, H.S, Shen, Y, Liu, G, Acton, T.B, Xiao, R, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG) 登録日 2003-09-05 公開日 2003-09-16 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 The NMR solution structure of the 30S ribosomal protein S27e encoded in gene RS27_ARCFU of Archaeoglobus fulgidis reveals a novel protein fold Protein Sci., 13, 2004
4ZOZ	Crystal structure of the Chaetomium thermophilum Sqt1 bound to the N-terminus of the ribosomal protein L10 分子名称: 60S ribosomal protein L10-like protein, Sqt1 著者 Pausch, P, Altegoer, F, Bange, G. 登録日 2015-05-07 公開日 2015-07-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Co-translational capturing of nascent ribosomal proteins by their dedicated chaperones. Nat Commun, 6, 2015
2NXN	T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11 分子名称: 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase 著者 Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G. 登録日 2006-11-17 公開日 2006-12-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA. Embo J., 26, 2007
1Y39	Co-evolution of protein and RNA structures within a highly conserved ribosomal domain 分子名称: 50S ribosomal protein L11, 58 Nucleotide Ribosomal 23S RNA Domain, COBALT (III) ION, ... 著者 Dunstan, M.S, GuhaThakurta, D, Draper, D.E, Conn, G.L. 登録日 2004-11-24 公開日 2005-03-22 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Coevolution of Protein and RNA Structures within a Highly Conserved Ribosomal Domain Chem.Biol., 12, 2005
2PWT	Crystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA group 分子名称: 22-mer of the ribosomal decoding site, DOUBLY FUNCTIONALIZED PAROMOMYCIN PM-II-162 著者 Kondo, J, Pachamuthu, K, Francois, B, Szychowski, J, Hanessian, S, Westhof, E. 登録日 2007-05-13 公開日 2007-09-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of the Bacterial Ribosomal Decoding Site Complexed with a Synthetic Doubly Functionalized Paromomycin Derivative: a New Specific Binding Mode to an A-Minor Motif Enhances in vitro Antibacterial Activity Chemmedchem, 2, 2007
2AYJ	Solution structure of 50S ribosomal protein L40e from Sulfolobus solfataricus 分子名称: 50S ribosomal protein L40e, ZINC ION 著者 Wu, B, Yee, A, Lukin, J, Lemak, A, Semesi, A, Ramelot, T, Kennedy, M, Edward, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG) 登録日 2005-09-07 公開日 2006-08-22 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of ribosomal protein L40E, a unique C4 zinc finger protein encoded by archaeon Sulfolobus solfataricus Protein Sci., 17, 2008
1NY4	Solution structure of the 30S ribosomal protein S28E from Pyrococcus horikoshii. Northeast Structural Genomics Consortium target JR19. 分子名称: 30S ribosomal protein S28E 著者 Aramini, J.M, Cort, J.R, Huang, Y.J, Xiao, R, Acton, T.B, Ho, C.K, Shih, L.-Y, Kennedy, M.A, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2003-02-11 公開日 2003-09-02 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution NMR structure of the 30S ribosomal protein S28E from Pyrococcus horikoshii. Protein Sci., 12, 2003
1S03	The Structure of a Ribosomal Protein S8/spc Operon mRNA Complex 分子名称: 30S ribosomal protein S8, 47-MER, ZINC ION 著者 Merianos, H.J, Wang, J, Moore, P.B. 登録日 2003-12-29 公開日 2004-05-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The structure of a ribosomal protein S8/spc operon mRNA complex. RNA, 10, 2004
1PBR	STRUCTURE OF 16S RIBOSOMAL RNA, NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: 16S RIBOSOMAL RNA, 2,6-diamino-2,6-dideoxy-beta-L-idopyranose-(1-3)-beta-D-ribofuranose, 2-DEOXYSTREPTAMINE, ... 著者 Fourmy, D, Recht, M.I, Blanchard, S, Puglisi, J.D. 登録日 1996-09-12 公開日 1997-09-17 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structure of the A site of Escherichia coli 16S ribosomal RNA complexed with an aminoglycoside antibiotic. Science, 274, 1996
2HW8	Structure of ribosomal protein L1-mRNA complex at 2.1 resolution. 分子名称: 1,4-BUTANEDIOL, 36-MER, 50S ribosomal protein L1, ... 著者 Tishchenko, S, Nikonova, E, Nikulin, A, Nevskaya, N, Volchkov, S, Piendl, W, Garber, M, Nikonov, S. 登録日 2006-08-01 公開日 2006-12-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of the ribosomal protein L1-mRNA complex at 2.1 A resolution: common features of crystal packing of L1-RNA complexes. ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2KJV	Solution structure and backbone dynamics of the ribosomal protein S6wt 分子名称: 30S ribosomal protein S6 著者 Ohman, A, Oliveberg, M, Oman, T. 登録日 2009-06-10 公開日 2009-12-22 最終更新日 2024-05-08 実験手法 SOLUTION NMR 主引用文献 Solution structures and backbone dynamics of the ribosomal protein S6 and its permutant P(54-55) Protein Sci., 19, 2010
7A05	NMR structure of D3-D4 domains of Vibrio vulnificus ribosomal protein S1 分子名称: 30S ribosomal protein S1 著者 Qureshi, N.S, Matzel, T, Cetiner, E.C, Schnieders, S, Jonker, H.R.A, Schwalbe, H, Fuertig, B. 登録日 2020-08-06 公開日 2021-06-23 最終更新日 2024-01-17 実験手法 SOLUTION NMR 主引用文献 NMR structure of the Vibrio vulnificus ribosomal protein S1 domains D3 and D4 provides insights into molecular recognition of single-stranded RNAs. Nucleic Acids Res., 49, 2021
7U6V	Cryo-EM structure of Shiga toxin 2 in complex with the native ribosomal P-stalk 分子名称: C-terminal domain (CTD) from the Ribosomal P-stalk, Shiga toxin 2a subunit A (Stx2A), Shiga toxin 2a subunit B (Stx2B) 著者 Kulczyk, A.W. 登録日 2022-03-06 公開日 2023-01-11 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Cryo-EM structure of Shiga toxin 2 in complex with the native ribosomal P-stalk reveals residues involved in the binding interaction. J.Biol.Chem., 299, 2022
5TQC	Crystal structure of transport factor karyopherin-beta 2 in complex with the PY-NLS of ribosomal protein L4 (RpL4) 分子名称: 60S ribosomal protein L4-like protein, Transportin-1,Transportin-1 著者 Huber, F.M, Hoelz, A. 登録日 2016-10-23 公開日 2017-02-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Molecular basis for protection of ribosomal protein L4 from cellular degradation. Nat Commun, 8, 2017
7T0Y	The Ribosomal RNA Processing 1B Protein Phosphatase-1 Holoenzyme 分子名称: 1,2-ETHANEDIOL, BROMIDE ION, FLUORIDE ION, ... 著者 Srivastava, G, Page, R, Peti, W. 登録日 2021-11-30 公開日 2022-12-07 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The ribosomal RNA processing 1B:protein phosphatase 1 holoenzyme reveals non-canonical PP1 interaction motifs. Cell Rep, 41, 2022
6J3L	Solution structure of the N-terminal extended protuberant domain of eukaryotic ribosomal stalk protein P0 分子名称: 60S acidic ribosomal protein P0 著者 Choi, K.H.A, Lee, K.M, Yang, L, Wing-Heng Yu, C, Banfield, D.K, Ito, K, Uchiumi, T, Wong, K.B. 登録日 2019-01-04 公開日 2019-09-04 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural and Mutagenesis Studies Evince the Role of the Extended Protuberant Domain of Ribosomal Protein uL10 in Protein Translation. Biochemistry, 58, 2019

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