PDB: 2824 件ウェブページステータス検索Chemie searchBIRD

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5UDK	IFIT1 monomeric mutant (L457E/L464E) with PPP-AAAA 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Abbas, Y.M, Martinez-Montero, S, Damha, M.J, Nagar, B. 登録日 2016-12-27 公開日 2017-03-01 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structure of human IFIT1 with capped RNA reveals adaptable mRNA binding and mechanisms for sensing N1 and N2 ribose 2'-O methylations. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3TGQ	Crystal structure of unliganded HIV-1 clade B strain YU2 gp120 core 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 YU2 gp120 著者 Kwon, Y.D, Kwong, P.D. 登録日 2011-08-17 公開日 2012-04-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Unliganded HIV-1 gp120 core structures assume the CD4-bound conformation with regulation by quaternary interactions and variable loops. Proc.Natl.Acad.Sci.USA, 109, 2012
7OQR	Crystal structure of Trypanosoma cruzi peroxidase 分子名称: ACETATE ION, Ascorbate peroxidase, GLYCEROL, ... 著者 Freeman, S.L, Kwon, H, Skafar, V, Fielding, A.J, Martinez, A, Piacenza, L, Radi, R, Raven, E.L. 登録日 2021-06-04 公開日 2022-06-22 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate. J.Biol.Chem., 298, 2022
3TGS	Crystal structure of HIV-1 clade C strain C1086 gp120 core in complex with NBD-556 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 clade C1086 gp120 core, N-(4-chlorophenyl)-N'-(2,2,6,6-tetramethylpiperidin-4-yl)ethanediamide 著者 Kwon, Y.D, Kwong, P.D. 登録日 2011-08-17 公開日 2012-04-04 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Unliganded HIV-1 gp120 core structures assume the CD4-bound conformation with regulation by quaternary interactions and variable loops. Proc.Natl.Acad.Sci.USA, 109, 2012
7PBL	RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s1 [t2 dataset] 分子名称: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ... 著者 Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C. 登録日 2021-08-02 公開日 2022-09-14 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration. Nature, 609, 2022
7PBO	RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s4 [t2 dataset] 分子名称: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ... 著者 Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C. 登録日 2021-08-02 公開日 2022-09-14 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration. Nature, 609, 2022
7PBM	RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s2 [t2 dataset] 分子名称: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ... 著者 Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C. 登録日 2021-08-02 公開日 2022-09-14 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration. Nature, 609, 2022
7PBP	RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s5 [t2 dataset] 分子名称: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ... 著者 Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C. 登録日 2021-08-02 公開日 2022-09-14 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration. Nature, 609, 2022
4QOM	Bacillus pumilus catalase with pyrogallol bound 分子名称: BENZENE-1,2,3-TRIOL, CHLORIDE ION, Catalase, ... 著者 Loewen, P.C. 登録日 2014-06-20 公開日 2015-02-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy. Proteins, 83, 2015
7PBN	RuvAB branch migration motor complexed to the Holliday junction - RuvB AAA+ state s3 [t2 dataset] 分子名称: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB, ... 著者 Fahrenkamp, D, Goessweiner-Mohr, N, Wald, J, Marlovits, T.C. 登録日 2021-08-02 公開日 2022-09-14 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Mechanism of AAA+ ATPase-mediated RuvAB-Holliday junction branch migration. Nature, 609, 2022
4QOL	Structure of Bacillus pumilus catalase 分子名称: ACETATE ION, CHLORIDE ION, Catalase, ... 著者 Loewen, P.C. 登録日 2014-06-20 公開日 2015-02-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy. Proteins, 83, 2015
5SW6	Crystal structure of an oxoferryl species of catalase-peroxidase KatG at pH5.6 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Catalase-peroxidase, OXYGEN ATOM, ... 著者 Loewen, P.C. 登録日 2016-08-08 公開日 2016-08-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A molecular switch and electronic circuit modulate catalase activity in catalase-peroxidases. EMBO Rep., 6, 2005
4QOP	Structure of Bacillus pumilus catalase with hydroquinone bound. 分子名称: CHLORIDE ION, Catalase, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Loewen, P.C. 登録日 2014-06-20 公開日 2015-02-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy. Proteins, 83, 2015
5SX0	Crystal structure of an oxoferryl species of catalase-peroxidase KatG at pH7.5 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Catalase-peroxidase, ... 著者 Loewen, P.C. 登録日 2016-08-09 公開日 2016-08-24 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A molecular switch and electronic circuit modulate catalase activity in catalase-peroxidases. EMBO Rep., 6, 2005
4QOQ	Structure of Bacillus pumilus catalase with guaiacol bound 分子名称: CHLORIDE ION, Catalase, Guaiacol, ... 著者 Loewen, P.C. 登録日 2014-06-20 公開日 2015-02-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy. Proteins, 83, 2015
4QOO	Structure of Bacillus pumilus catalase with resorcinol bound. 分子名称: CHLORIDE ION, Catalase, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Loewen, P.C. 登録日 2014-06-20 公開日 2015-02-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy. Proteins, 83, 2015
4QON	Structure of Bacillus pumilus catalase with catechol bound. 分子名称: CATECHOL, CHLORIDE ION, Catalase, ... 著者 Loewen, P.C. 登録日 2014-06-20 公開日 2015-02-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy. Proteins, 83, 2015
4QOR	Structure of Bacillus pumilus catalase with chlorophenol bound. 分子名称: 2-CHLOROPHENOL, CHLORIDE ION, Catalase, ... 著者 Loewen, P.C. 登録日 2014-06-20 公開日 2015-02-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy. Proteins, 83, 2015
7LRK	Crystal structure of BPTF bromodomain in complex with inhibitor Pdy-3-093 分子名称: 1,2-ETHANEDIOL, 4-chloranyl-2-methyl-5-[[(3~{S})-pyrrolidin-3-yl]amino]pyridazin-3-one, Nucleosome-remodeling factor subunit BPTF 著者 Chan, A, Schonbrunn, E. 登録日 2021-02-16 公開日 2022-08-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem., 64, 2021
7LRO	Crystal structure of BPTF bromodomain in complex with inhibitor HZ-01-105 分子名称: 1,2-ETHANEDIOL, 5-(azetidin-3-ylamino)-4-chloranyl-2-methyl-pyridazin-3-one, DIMETHYL SULFOXIDE, ... 著者 Chan, A, Schonbrunn, E. 登録日 2021-02-17 公開日 2022-08-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem., 64, 2021
7LP0	Crystal structure of BPTF bromodomain in complex with inhibitor Pdy-3-077 分子名称: 1,2-ETHANEDIOL, 4-chlorol-2-methyl-5-[[(3~{R})-1-methylpiperidin-3-yl]amino]pyridazin-3-one, DIMETHYL SULFOXIDE, ... 著者 Chan, A, Schonbrunn, E. 登録日 2021-02-11 公開日 2022-08-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem., 64, 2021
7LPK	Crystal structure of BPTF bromodomain in complex with inhibitor HZ-03-112 分子名称: 1,2-ETHANEDIOL, 4-chloranyl-2-methyl-5-[[(3~{R})-pyrrolidin-3-yl]amino]pyridazin-3-one, Nucleosome-remodeling factor subunit BPTF 著者 Chan, A, Schonbrunn, E. 登録日 2021-02-12 公開日 2022-08-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem., 64, 2021
1O65	Crystal structure of an hypothetical protein 分子名称: Hypothetical protein yiiM 著者 Structural GenomiX 登録日 2003-10-23 公開日 2003-11-11 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Structural analysis of a set of proteins resulting from a bacterial genomics project Proteins, 60, 2005
4DZW	Crystal Structure of Trypanosome cruzi farnesyl diphosphate synthase in complex with [2-(cyclohexylamino)ethane-1,1-diyl]bisphosphonic acid and Mg2+ 分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Farnesyl pyrophosphate synthase, MAGNESIUM ION, ... 著者 Aripirala, S, Amzel, L.M, Gabelli, S.B. 登録日 2012-03-01 公開日 2013-01-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Design, synthesis, calorimetry, and crystallographic analysis of 2-alkylaminoethyl-1,1-bisphosphonates as inhibitors of Trypanosoma cruzi farnesyl diphosphate synthase. J.Med.Chem., 55, 2012
3SKF	Crystal structure of beta-site app-cleaving enzyme 1 (BACE-WT) complex with (2S)-2-((3S)-3-(acetylamino)-3-(butan-2-yl)-2-oxopyrrolidin-1-yl)-N-((2S,3R)-3-hydroxy-4-((3-methoxybenzyl)amino)-1-phenylbutan-2-yl)-4-phenylbutanamide 分子名称: (2S)-2-{(3S)-3-(acetylamino)-3-[(2S)-butan-2-yl]-2-oxopyrrolidin-1-yl}-N-{(2S,3R)-3-hydroxy-4-[(3-methoxybenzyl)amino]-1-phenylbutan-2-yl}-4-phenylbutanamide, Beta-secretase 1, IODIDE ION 著者 Muckelbauer, J.K. 登録日 2011-06-22 公開日 2011-08-31 最終更新日 2011-11-02 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Synthesis and in vivo evaluation of cyclic diaminopropane BACE-1 inhibitors. Bioorg.Med.Chem.Lett., 21, 2011

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