PDB: 7386 件ウェブページステータス検索Chemie searchBIRD

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4BTS	THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A 分子名称: 18S ribosomal RNA, 40S RIBOSOMAL PROTEIN RACK1, 40S RIBOSOMAL PROTEIN RPS10E, ... 著者 Weisser, M, Voigts-Hoffmann, F, Rabl, J, Leibundgut, M, Ban, N. 登録日 2013-06-19 公開日 2013-07-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.703 Å) 主引用文献 The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A. Nat. Struct. Mol. Biol., 20, 2013
6GC4	50S ribosomal subunit assembly intermediate state 3 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Nikolay, R, Hilal, T, Qin, B, Loerke, J, Buerger, J, Mielke, T, Spahn, C.M.T. 登録日 2018-04-17 公開日 2018-07-04 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural Visualization of the Formation and Activation of the 50S Ribosomal Subunit during In Vitro Reconstitution. Mol. Cell, 70, 2018
6PVK	Bacterial 45SRbgA ribosomal particle class A 分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Ortega, J, Seffouh, A, Jain, N, Jahagirdar, D, Basu, K, Razi, A, Ni, X, Guarne, A, Britton, R.A. 登録日 2019-07-20 公開日 2019-09-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate. Nucleic Acids Res., 47, 2019
6GC0	50S ribosomal subunit assembly intermediate state 4 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Nikolay, R, Hilal, T, Qin, B, Loerke, J, Buerger, J, Mielke, T, Spahn, C.M.T. 登録日 2018-04-16 公開日 2018-06-20 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural Visualization of the Formation and Activation of the 50S Ribosomal Subunit during In Vitro Reconstitution. Mol. Cell, 70, 2018
7S0S	M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit 分子名称: 16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA, 23S rRNA, 50S ribosomal protein L10, ... 著者 Laughlin, Z.T, Dunham, C.M, Conn, G.L. 登録日 2021-08-31 公開日 2022-03-30 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.05 Å) 主引用文献 50S subunit recognition and modification by the Mycobacterium tuberculosis ribosomal RNA methyltransferase TlyA. Proc.Natl.Acad.Sci.USA, 119, 2022
7PWF	Cryo-EM structure of small subunit of Giardia lamblia ribosome at 2.9 A resolution 分子名称: 40S ribosomal protein S21, 40S ribosomal protein S25, 40S ribosomal protein S26, ... 著者 Hiregange, D.G, Rivalta, A, Bose, T, Breiner-Goldstein, E, Samiya, S, Cimicata, G, Kulakova, L, Zimmerman, E, Bashan, A, Herzberg, O, Yonath, A. 登録日 2021-10-06 公開日 2022-05-25 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.85 Å) 主引用文献 Cryo-EM structure of the ancient eukaryotic ribosome from the human parasite Giardia lamblia. Nucleic Acids Res., 50, 2022
4CCK	60S ribosomal protein L8 histidine hydroxylase (NO66) in complex with Mn(II) and N-oxalylglycine (NOG) 分子名称: 1,2-ETHANEDIOL, BIFUNCTIONAL LYSINE-SPECIFIC DEMETHYLASE AND HISTIDYL-HYDROXYLASE NO66, MANGANESE (II) ION, ... 著者 Chowdhury, R, Ge, W, Clifton, I.J, Schofield, C.J. 登録日 2013-10-23 公開日 2014-05-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Ribosomal oxygenases are structurally conserved from prokaryotes to humans. Nature, 510, 2014
4CCJ	60S ribosomal protein L8 histidine hydroxylase (NO66) in apo form 分子名称: 1,2-ETHANEDIOL, BIFUNCTIONAL LYSINE-SPECIFIC DEMETHYLASE AND HISTIDYL-HYDROXYLASE NO66 著者 Chowdhury, R, Ge, W, Clifton, I.J, Schofield, C.J. 登録日 2013-10-23 公開日 2014-05-14 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Ribosomal oxygenases are structurally conserved from prokaryotes to humans. Nature, 510, 2014
4V5O	CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1. 分子名称: 18S RRNA, 40S RIBOSOMAL PROTEIN S12, 40S RIBOSOMAL PROTEIN S3A, ... 著者 Rabl, J, Leibundgut, M, Ataide, S.F, Haag, A, Ban, N. 登録日 2010-11-26 公開日 2014-07-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.93 Å) 主引用文献 Crystal Structure of the Eukaryotic 40S Ribosomal Subunit in Complex with Initiation Factor 1. Science, 331, 2011
3J6B	Structure of the yeast mitochondrial large ribosomal subunit 分子名称: 21S ribosomal RNA, 54S ribosomal protein IMG1, mitochondrial, ... 著者 Amunts, A, Brown, A, Bai, X.C, Llacer, J.L, Hussain, T, Emsley, P, Long, F, Murshudov, G, Scheres, S.H.W, Ramakrishnan, V. 登録日 2014-01-22 公開日 2014-04-09 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure of the yeast mitochondrial large ribosomal subunit. Science, 343, 2014
3VI6	Crystal Structure of human ribosomal protein L30e 分子名称: 60S ribosomal protein L30, FORMIC ACID 著者 Kawaguchi, A, Ose, T, Yao, M, Tanaka, I. 登録日 2011-09-21 公開日 2011-12-21 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Crystallization and preliminary X-ray structure analysis of human ribosomal protein L30e Acta Crystallogr.,Sect.F, 67, 2011
1OND	THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC 分子名称: 23S RIBOSOMAL RNA, 50S ribosomal protein L22, 50S ribosomal protein L32, ... 著者 Berisio, R, Schluenzen, F, Harms, J, Bashan, A, Auerbach, T, Baram, D, Yonath, A. 登録日 2003-02-27 公開日 2003-04-15 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural insight into the role of the ribosomal tunnel in cellular regulation Nat.Struct.Biol., 10, 2003
2PA2	Crystal structure of human Ribosomal protein L10 core domain 分子名称: 60S ribosomal protein L10, POTASSIUM ION 著者 Nishimura, M, Kaminishi, T, Takemoto, C, Kawazoe, M, Yoshida, T, Tanaka, A, Sugano, S, Shirouzu, M, Ohkubo, T, Yokoyama, S, Kobayashi, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-03-27 公開日 2008-03-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of Human Ribosomal Protein L10 Core Domain Reveals Eukaryote-Specific Motifs in Addition to the Conserved Fold J.Mol.Biol., 377, 2008
2GHJ	Crystal structure of folded and partially unfolded forms of Aquifex aeolicus ribosomal protein L20 分子名称: 50S ribosomal protein L20, SULFATE ION 著者 Timsit, Y, Allemand, F, Chiaruttini, C, Springer, M. 登録日 2006-03-27 公開日 2006-04-18 最終更新日 2018-02-07 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Coexistence of two protein folding states in the crystal structure of ribosomal protein L20 Embo Rep., 7, 2006
1B75	SOLUTION STRUCTURE OF RIBOSOMAL PROTEIN L25 FROM ESCHERICHIA COLI 分子名称: PROTEIN (50S RIBOSOMAL PROTEIN L25) 著者 Stoldt, M, Woehnert, J, Goerlach, M, Brown, L.R. 登録日 1999-01-27 公開日 2000-01-26 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 The NMR structure of Escherichia coli ribosomal protein L25 shows homology to general stress proteins and glutaminyl-tRNA synthetases. EMBO J., 17, 1998
1AB3	RIBOSOMAL PROTEIN S15 FROM THERMUS THERMOPHILUS, NMR, 26 STRUCTURES 分子名称: RIBOSOMAL RNA BINDING PROTEIN S15 著者 Berglund, H, Rak, A, Serganov, A, Garber, M, Hard, T. 登録日 1997-02-03 公開日 1997-04-01 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of the ribosomal RNA binding protein S15 from Thermus thermophilus. Nat.Struct.Biol., 4, 1997
1QA6	CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX 分子名称: 58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN, MAGNESIUM ION, OSMIUM ION, ... 著者 Conn, G.L, Draper, D.E, Lattman, E.E, Gittis, A.G. 登録日 1999-04-15 公開日 1999-05-25 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of a conserved ribosomal protein-RNA complex. Science, 284, 1999
9BKD	The structure of human Pdcd4 bound to the 40S small ribosomal subunit 分子名称: 18S rRNA, 40S ribosomal protein S12, 40S ribosomal protein S13, ... 著者 Brito Querido, J, Sokabe, M, Diaz-Lopez, I, Gordiyenko, Y, Zuber, P, Albacete-Albacete, L, Ramakrishnan, V, S.Fraser, C. 登録日 2024-04-27 公開日 2024-09-04 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Human tumor suppressor protein Pdcd4 binds at the mRNA entry channel in the 40S small ribosomal subunit. Nat Commun, 15, 2024
4V9N	Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2. 分子名称: 16S rRNA (1504-MER), 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Santos, N, Zhu, J, Donohue, J.P, Korostelev, A.A, Noller, H.F. 登録日 2013-04-26 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Crystal Structure of the 70S Ribosome Bound with the Q253P Mutant Form of Release Factor RF2. Structure, 21, 2013
3WY9	Crystal structure of a complex of the archaeal ribosomal stalk protein aP1 and the GDP-bound archaeal elongation factor aEF1alpha 分子名称: 50S ribosomal protein L12, Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE 著者 Ito, K, Honda, T, Suzuki, T, Miyoshi, T, Murakami, R, Yao, M, Uchiumi, T. 登録日 2014-08-22 公開日 2014-12-24 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Molecular insights into the interaction of the ribosomal stalk protein with elongation factor 1 alpha. Nucleic Acids Res., 42, 2014
486D	X-RAY CRYSTAL STRUCTURES OF 70S RIBOSOME FUNCTIONAL COMPLEXES 分子名称: 900 STEM-LOOP OF 16S RRNA IN THE 70S RIBOSOME, A-SITE CODON OF 70S RIBOSOME, A-SITE TRNA OF 70S RIBOSOME, ... 著者 Cate, J.H, Yusupov, M.M, Yusupova, G.Zh, Earnest, T.N, Noller, H.F. 登録日 1999-09-09 公開日 1999-10-04 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (7.5 Å) 主引用文献 X-ray crystal structures of 70S ribosome functional complexes. Science, 285, 1999
4WFA	The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolid 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S rRNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Eyal, Z, Matzov, D, Krupkin, M, Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A.E. 登録日 2014-09-14 公開日 2015-10-21 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.392 Å) 主引用文献 Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus. Proc.Natl.Acad.Sci.USA, 112, 2015
8QCQ	B. subtilis ApdA-stalled ribosomal complex 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Morici, M, Wilson, D.N. 登録日 2023-08-28 公開日 2024-03-20 最終更新日 2024-04-03 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity. Nat Commun, 15, 2024
5VYC	Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1. 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Lomakin, I.B, Stolboushkina, E.A, Vaidya, A.T, Garber, M.B, Dmitriev, S.E, Steitz, T.A. 登録日 2017-05-24 公開日 2017-07-19 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (6 Å) 主引用文献 Crystal Structure of the Human Ribosome in Complex with DENR-MCT-1. Cell Rep, 20, 2017
5T9P	Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate 分子名称: CHLORIDE ION, Ribosome biogenesis protein 15, SULFATE ION 著者 Zhang, J, Gonzalez, E.L, Hall, M.T.T. 登録日 2016-09-09 公開日 2016-11-16 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural analysis reveals the flexible C-terminus of Nop15 undergoes rearrangement to recognize a pre-ribosomal RNA folding intermediate. Nucleic Acids Res., 45, 2017

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