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5LZ9
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Fragment-based inhibitors of Lipoprotein associated Phospholipase A2
分子名称: 2-fluoranyl-5-[2-[(4~{S})-4-[4-methyl-1,1-bis(oxidanylidene)thian-4-yl]-2-oxidanylidene-pyrrolidin-1-yl]ethoxy]benzenecarbonitrile, CHLORIDE ION, Platelet-activating factor acetylhydrolase, ...
著者Woolford, A, Day, P.
登録日2016-09-29
公開日2016-12-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Fragment-Based Approach to the Development of an Orally Bioavailable Lactam Inhibitor of Lipoprotein-Associated Phospholipase A2 (Lp-PLA2).
J. Med. Chem., 59, 2016
4RPC
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BU of 4rpc by Molmil
Crystal structure of the putative alpha/beta hydrolase family protein from Desulfitobacterium hafniense
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TETRAETHYLENE GLYCOL, putative alpha/beta hydrolase
著者Filippova, E.V, Wawrzak, Z, Minasov, G, Kiryukhina, O, Endres, M, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2014-10-30
公開日2014-11-12
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the putative alpha/beta hydrolase family protein from Desulfitobacterium hafniense
To be Published
7A2Q
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Crystal structure of the Fyn SH3 domain L112V-S114N-S115T-E121L-R123H mutant at pH 3.0 with PEG
分子名称: SULFATE ION, TETRAETHYLENE GLYCOL, Tyrosine-protein kinase Fyn
著者Camara-Artigas, A, Plaza-Garrido, M, Salinas-Garcia, M.C.
登録日2020-08-18
公開日2021-08-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.94 Å)
主引用文献Crystal structure of the Fyn SH3 domain L112V-S114N-S115T-E121L-R123H mutant at pH 3.0 with PEG
To be published
6DNA
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BU of 6dna by Molmil
Crystal structure of T110A mutant human Glutamate oxaloacetate transaminase 1 (GOT1)
分子名称: Aspartate aminotransferase, cytoplasmic, PYRIDOXAL-5'-PHOSPHATE, ...
著者Assar, Z, Holt, M.C, Stein, A.J, Lairson, L, Lyssiotis, C.A.
登録日2018-06-06
公開日2018-11-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Biochemical Characterization and Structure-Based Mutational Analysis Provide Insight into the Binding and Mechanism of Action of Novel Aspartate Aminotransferase Inhibitors.
Biochemistry, 57, 2018
7WJK
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BU of 7wjk by Molmil
Complex structure of AtHPPD-ZWJ
分子名称: 3-[2-[4-[[4-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1,3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-4,6,9,11-tetraen-8-yl]phenoxy]methyl]-1,2,3-triazol-1-yl]ethyl]-1,5-dimethyl-6-[(1S)-2-oxidanyl-6-oxidanylidene-cyclohex-2-en-1-yl]carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Yang, G.-F, Lin, H.-Y, Dong, J.
登録日2022-01-06
公開日2023-01-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.704 Å)
主引用文献Complex structure of AtHPPD-PyQ1
To Be Published
5LZ4
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BU of 5lz4 by Molmil
Fragment-based inhibitors of Lipoprotein associated Phospholipase A2
分子名称: 5-[2-(4,4-dimethyl-2-oxidanylidene-pyrrolidin-1-yl)ethoxy]-2-fluoranyl-benzenecarbonitrile, CHLORIDE ION, Platelet-activating factor acetylhydrolase
著者Woolford, A, Day, P.
登録日2016-09-29
公開日2016-12-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Fragment-Based Approach to the Development of an Orally Bioavailable Lactam Inhibitor of Lipoprotein-Associated Phospholipase A2 (Lp-PLA2).
J. Med. Chem., 59, 2016
3K6O
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BU of 3k6o by Molmil
Crystal structure of protein of unknown function DUF1344 (YP_001299214.1) from Bacteroides vulgatus ATCC 8482 at 2.00 A resolution
分子名称: SULFATE ION, TETRAETHYLENE GLYCOL, uncharacterized protein DUF1344
著者Joint Center for Structural Genomics (JCSG)
登録日2009-10-09
公開日2009-11-03
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of protein of unknown function DUF1344 (YP_001299214.1) from Bacteroides vulgatus ATCC 8482 at 2.00 A resolution
To be published
4TQX
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BU of 4tqx by Molmil
Molecular Basis of Streptococcus mutans Sortase A Inhibition by Chalcone.
分子名称: ACETIC ACID, SULFATE ION, Sortase, ...
著者Wallock-Richards, D.J, Marles-Wright, J, Clarke, D.J, Maitra, A, Dodds, M, Hanley, B, Campopiano, D.J.
登録日2014-06-12
公開日2015-05-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Molecular basis of Streptococcus mutans sortase A inhibition by the flavonoid natural product trans-chalcone.
Chem.Commun.(Camb.), 51, 2015
8OVD
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BU of 8ovd by Molmil
Respiratory supercomplex (III2-IV2) from Mycobacterium smegmatis
分子名称: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
著者Kovalova, T, Krol, S, Sjostrand, D, Riepl, D, Gamiz-Hernandez, A, Brzezinski, P, Kaila, V, Hogbom, M.
登録日2023-04-25
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Long-range charge transfer mechanism of the III 2 IV 2 mycobacterial supercomplex.
Nat Commun, 15, 2024
8OVC
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BU of 8ovc by Molmil
Respiratory supercomplex (III2-IV2) from Mycobacterium smegmatis
分子名称: (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate, (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ...
著者Kovalova, T, Krol, S, Sjostrand, D, Riepl, D, Gamiz-Hernandez, A, Brzezinski, P, Kaila, V, Hogbom, M.
登録日2023-04-25
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Long-range charge transfer mechanism of the III 2 IV 2 mycobacterial supercomplex.
Nat Commun, 15, 2024
6BM7
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BU of 6bm7 by Molmil
Crystal structure of Trypanosoma brucei AdoMetDC/prozyme heterodimer in complex with pyrimidineamine inhibitor UTSAM568
分子名称: 1,4-DIAMINOBUTANE, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-4-[(3,5-dibromophenyl)amino]-6-methylpyrimidin-1-ium, ...
著者Volkov, O.A, Chen, Z, Phillips, M.A.
登録日2017-11-13
公開日2018-01-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Species-Selective Pyrimidineamine Inhibitors of Trypanosoma brucei S-Adenosylmethionine Decarboxylase.
J. Med. Chem., 61, 2018
8OXS
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BU of 8oxs by Molmil
Cholera holotoxin variant (chimera with E. coli heat-labile enterotoxin, 4 C-terminal substitutions)
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Cholera enterotoxin subunit A, Cholera enterotoxin subunit B, ...
著者Kersten, F, Heim, J.B, Cordara, G, Krengel, U.
登録日2023-05-02
公開日2024-08-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Cholera toxin variants
To Be Published
8OX6
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BU of 8ox6 by Molmil
Cryo-EM structure of ATP8B1-CDC50A in E1P conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Cell cycle control protein 50A, MAGNESIUM ION, ...
著者Dieudonne, T, Kummerer, F, Juknaviciute Laursen, M, Stock, C, Kock Flygaard, R, Khalid, S, Lenoir, G, Lyons, J.A, Lindorff-Larsen, K, Nissen, P.
登録日2023-05-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Activation and substrate specificity of the human P4-ATPase ATP8B1.
Nat Commun, 14, 2023
5LXM
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BU of 5lxm by Molmil
Crystal structure of Aurora-A bound to a hydrocarbon-stapled proteomimetic of TPX2
分子名称: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
著者McIntyre, P.J, Bayliss, R.
登録日2016-09-22
公開日2016-11-02
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献A TPX2 Proteomimetic Has Enhanced Affinity for Aurora-A Due to Hydrocarbon Stapling of a Helix.
ACS Chem. Biol., 11, 2016
6DTL
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BU of 6dtl by Molmil
Mitogen-activated protein kinase 6
分子名称: Mitogen-activated protein kinase 6
著者Ruble, J.
登録日2018-06-17
公開日2019-05-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.753 Å)
主引用文献Bipartite anchoring of SCREAM enforces stomatal initiation by coupling MAP kinases to SPEECHLESS.
Nat.Plants, 5, 2019
8WA5
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BU of 8wa5 by Molmil
Cryo-EM structure of the gastric proton pump Y799W/E936Q mutant in K+-occluded (K+)E2-AlF state
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Abe, K.
登録日2023-09-07
公開日2023-11-29
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Specific protonation of acidic residues confers K + selectivity to the gastric proton pump.
J.Biol.Chem., 300, 2023
8OX5
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BU of 8ox5 by Molmil
Cryo-EM structure of ATP8B1-CDC50A in E1P-ADP conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Cell cycle control protein 50A, ...
著者Dieudonne, T, Kummerer, F, Juknaviciute Laursen, M, Stock, C, Kock Flygaard, R, Khalid, S, Lenoir, G, Lyons, J.A, Lindorff-Larsen, K, Nissen, P.
登録日2023-05-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Activation and substrate specificity of the human P4-ATPase ATP8B1.
Nat Commun, 14, 2023
2O44
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BU of 2o44 by Molmil
Structure of 23S rRNA of the large ribosomal subunit from Deinococcus radiodurans in complex with the macrolide josamycin
分子名称: (2S,3S,4R,6S)-6-{[(2R,3S,4R,5R,6S)-6-{[(4R,5S,6S,7R,9R,10S,12E,14Z,16R)-4-(ACETYLOXY)-10-HYDROXY-5-METHOXY-9,16-DIMETHYL-2-OXO-7-(2-OXOETHYL)OXACYCLOHEXADECA-12,14-DIEN-6-YL]OXY}-4-(DIMETHYLAMINO)-5-HYDROXY-2-METHYLTETRAHYDRO-2H-PYRAN-3-YL]OXY}-4-HYDROXY-2,4-DIMETHYLTETRAHYDRO-2H-PYRAN-3-YL 3-METHYLBUTANOATE, 23S rRNA
著者Pyetan, E, Daram, D, Auerbach-Nevo, T, Yonath, A.
登録日2006-12-03
公開日2007-12-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Chemical parameters influencing fine tuning in the binding of Macrolide antibiotics to the ribosomal tunnel
TO BE PUBLISHED
8X2P
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BU of 8x2p by Molmil
The Crystal Structure of LCK from Biortus.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, TETRAETHYLENE GLYCOL, ...
著者Wang, F, Cheng, W, Lv, Z, Meng, Q, Lu, Y.
登録日2023-11-10
公開日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Crystal Structure of LCK from Biortus.
To Be Published
7A0W
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BU of 7a0w by Molmil
Structure of dimeric sodium proton antiporter NhaA, at pH 8.5, crystallized with chimeric Fab antibodies
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, CARDIOLIPIN, CHLORIDE ION, ...
著者Fippel, A, Gross, N.M, Mir, S.H, Wirth, C, Hunte, C.
登録日2020-08-11
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Molecular determinants for substrate uptake in electrogenic sodium/proton antiporters
To Be Published
7A0X
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Structure of dimeric sodium proton antiporter NhaA, at pH 6.0, crystallized with chimeric Fab antibodies
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CALCIUM ION, ...
著者Fippel, A, Lentes, C.J, Mir, S.H, Wirth, C, Hunte, C.
登録日2020-08-11
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献Molecular determinants for substrate uptake in electrogenic sodium/proton antiporters
To Be Published
5NIR
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BU of 5nir by Molmil
Crystal structure of collagen 2A vWC domain
分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Collagen alpha-1(II) chain, ...
著者Fischer, G, Blythe, E, Hyvonen, M.
登録日2017-03-27
公開日2017-06-14
最終更新日2017-08-09
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural analyses of von Willebrand factor C domains of collagen 2A and CCN3 reveal an alternative mode of binding to bone morphogenetic protein-2.
J. Biol. Chem., 292, 2017
8P1X
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TarM(Se)_G117R-UDP-glucose
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
著者Guo, Y, Stehle, T.
登録日2023-05-13
公開日2023-12-06
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Invasive Staphylococcus epidermidis uses a unique processive wall teichoic acid glycosyltransferase to evade immune recognition.
Sci Adv, 9, 2023
7A0Y
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Structure of dimeric sodium proton antiporter NhaA K300R variant, at pH 8.2, crystallized with chimeric Fab antibodies
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Fippel, A, Mir, S.H, Lentes, C.J, Wirth, C, Hunte, C.
登録日2020-08-11
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Molecular determinants for substrate uptake in electrogenic sodium/proton antiporters
To Be Published
6D66
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Crystal structure of the human dual specificity 1 catalytic domain (C258S) as a maltose binding protein fusion in complex with the designed AR protein mbp3_16
分子名称: 1,2-ETHANEDIOL, D-ALANINE, DI(HYDROXYETHYL)ETHER, ...
著者Gumpena, R, Waugh, D.S, Lountos, G.T.
登録日2018-04-20
公開日2018-09-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.226 Å)
主引用文献MBP-binding DARPins facilitate the crystallization of an MBP fusion protein.
Acta Crystallogr F Struct Biol Commun, 74, 2018

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件を2024-09-25に公開中

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