Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9EYU
DownloadVisualize
BU of 9eyu by Molmil
Human PRMT5 in complex with AZ compound 1
分子名称: (1~{S})-2-[(2-carbamimidamido-1,3-thiazol-5-yl)methyl]-~{N}-[(4-fluorophenyl)methyl]-3-oxidanylidene-1~{H}-isoindole-1-carboxamide, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein WDR77, ...
著者Debreczeni, J.
登録日2024-04-09
公開日2024-08-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Discovery and In Vivo Efficacy of AZ-PRMT5i-1, a Novel PRMT5 Inhibitor with High MTA Cooperativity.
J.Med.Chem., 67, 2024
4PFW
DownloadVisualize
BU of 4pfw by Molmil
Crystal structure of mannohexaose bound oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (TM1226) from THERMOTOGA MARITIMA at 2.2 A resolution
分子名称: ABC transporter substrate-binding protein, GLYCEROL, MAGNESIUM ION, ...
著者Lu, X, Ghimire-Rijal, S, Cuneo, M.J.
登録日2014-04-30
公開日2014-09-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献Duplication of Genes in an ATP-binding Cassette Transport System Increases Dynamic Range While Maintaining Ligand Specificity.
J.Biol.Chem., 289, 2014
9EOX
DownloadVisualize
BU of 9eox by Molmil
SARS-CoV2 major protease in covalent complex with a soluble inhibitor.
分子名称: 3C-like proteinase nsp5, POTASSIUM ION, Soluble inhibitor
著者Moche, M, Lennerstrand, J, Nyman, T, Strandback, E, Akaberi, D.
登録日2024-03-15
公開日2024-09-04
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
Antimicrob.Agents Chemother., 2024
9CBE
DownloadVisualize
BU of 9cbe by Molmil
Structure of a type III antifreeze protein isoform HPLC12 re-refined using standard protocols
分子名称: Type-3 ice-structuring protein HPLC 12
著者Wlodawer, A, Dauter, Z.
登録日2024-06-19
公開日2024-07-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献In some cases more complicated approaches to refinement of macromolecular structures are not necessary.
Iucrj, 11, 2024
9FWG
DownloadVisualize
BU of 9fwg by Molmil
LSD1/CoREST bound to bomedemstat
分子名称: Bomedemstat FAD adduct, Lysine-specific histone demethylase 1A, REST corepressor 1
著者Speranzini, V, Mattevi, A.
登録日2024-06-30
公開日2024-07-10
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Characterization of structural, biochemical, pharmacokinetic, and pharmacodynamic properties of the LSD1 inhibitor bomedemstat in preclinical models.
Prostate, 84, 2024
9CUO
DownloadVisualize
BU of 9cuo by Molmil
Crystal structure of CRBN with compound 3
分子名称: (3S)-3-(3-methyl-2-oxo-2,3-dihydro-1H-1,3-benzimidazol-1-yl)piperidine-2,6-dione, 1,2-ETHANEDIOL, Protein cereblon, ...
著者Zheng, X, Ji, N, Campbell, V, Slavin, A, Zhu, X, Chen, D, Rong, H, Enerson, B, Mayo, M, Sharma, K, Browne, C.M, Klaus, C.R, Li, H, Massa, G, McDonald, A.A, Shi, Y, Sintchak, M, Skouras, S, Walther, D.M, Yuan, K, Zhang, Y, Kelleher, J, Guang, L, Luo, X, Mainolfi, N, Weiss, M.M.
登録日2024-07-26
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of KT-474─a Potent, Selective, and Orally Bioavailable IRAK4 Degrader for the Treatment of Autoimmune Diseases.
J.Med.Chem., 2024
4P4B
DownloadVisualize
BU of 4p4b by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor CTT54
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Barinka, C.
登録日2014-03-12
公開日2015-05-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities.
Febs J., 283, 2016
9G0K
DownloadVisualize
BU of 9g0k by Molmil
CysG(N-16) in complex with SAH (metal free, cocrystallization in presence of EDTA) from Kitasatospora cystarginea
分子名称: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, SAM-dependent methyltransferase
著者Kuttenlochner, W, Beller, P, Kaysser, L, Groll, M.
登録日2024-07-08
公開日2024-07-17
最終更新日2024-09-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Deciphering the SAM- and metal-dependent mechanism of O-methyltransferases in cystargolide and belactosin biosynthesis: A structure-activity relationship study.
J.Biol.Chem., 300, 2024
4P4D
DownloadVisualize
BU of 4p4d by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor MP1C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Barinka, C.
登録日2014-03-12
公開日2015-05-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Design of composite inhibitors targeting glutamate carboxypeptidase II: the importance of effector functionalities.
Febs J., 283, 2016
9F5Q
DownloadVisualize
BU of 9f5q by Molmil
Crystal structure of selenomethionine-labelled kinetoplastid kinetochore protein KKT23 acetyltransferase domain from Trypanosoma brucei
分子名称: ACETYL COENZYME *A, N-acetyltransferase domain-containing protein
著者Ludzia, P, Ishii, M, Akiyoshi, B.
登録日2024-04-30
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The kinetoplastid kinetochore protein KKT23 acetyltransferase is a structural homolog of GCN5 that acetylates the histone H2A C-terminal tail
Biorxiv, 2024
8WEW
DownloadVisualize
BU of 8wew by Molmil
Haloquadratum walsbyi middle rhodopsin
分子名称: Bacteriorhodopsin-II-like protein, MAGNESIUM ION, RETINAL
著者Ko, L.N, Lim, G.Z, Ko, T, Yang, C.S.
登録日2023-09-19
公開日2024-09-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Haloquadratum walsbyi middle rhodopsin at 2.5 Angstroms resolution.
To Be Published
9BOL
DownloadVisualize
BU of 9bol by Molmil
Crystal structure of the complex between VHL, ElonginB, ElonginC, and compound 5
分子名称: (4R)-1-[(2S)-2-(4-cyclopropyl-1H-1,2,3-triazol-1-yl)-3,3-dimethylbutanoyl]-4-hydroxy-N-{[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl}-L-prolinamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Murray, J.M, Wu, H, Fuhrmann, J, Fairbrother, W.J, DiPasquale, A.
登録日2024-05-03
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Potency-enhanced peptidomimetic VHL ligands with improved oral bioavailability
To Be Published
9BKR
DownloadVisualize
BU of 9bkr by Molmil
Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Isoform 2 of E3 ubiquitin-protein ligase TRIP12, UNKNOWN ATOM OR ION
著者Kimani, S, Dong, A, Li, Y, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2024-04-29
公開日2024-07-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of the Human TRIP12 WWE domain (isoform 2) in complex with ATP
To be published
4P1N
DownloadVisualize
BU of 4p1n by Molmil
Crystal structure of Atg1-Atg13 complex
分子名称: Atg1 tMIT, Atg13 MIM
著者Fujioka, Y, Noda, N.N.
登録日2014-02-27
公開日2014-05-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of starvation-induced assembly of the autophagy initiation complex.
Nat.Struct.Mol.Biol., 21, 2014
4P1U
DownloadVisualize
BU of 4p1u by Molmil
Influenza A (flu) virus polymerase basic protein 2 (PB2) bound to VX787, an azaindole inhibitor
分子名称: (2S,3S)-3-[[5-fluoranyl-2-(5-fluoranyl-1H-pyrrolo[2,3-b]pyridin-3-yl)pyrimidin-4-yl]amino]bicyclo[2.2.2]octane-2-carboxylic acid, Polymerase basic protein 2
著者Jacobs, M.D.
登録日2014-02-27
公開日2014-07-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Discovery of a Novel, First-in-Class, Orally Bioavailable Azaindole Inhibitor (VX-787) of Influenza PB2.
J.Med.Chem., 57, 2014
9FT1
DownloadVisualize
BU of 9ft1 by Molmil
Yeast 20S proteasome in complex with epoxyketone inhibitor 13
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
著者Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S.
登録日2024-06-23
公開日2024-07-10
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites
to be published
9EYV
DownloadVisualize
BU of 9eyv by Molmil
Human PRMT5 in complex with AZ compound 12
分子名称: (1~{S})-~{N}-[(4-fluorophenyl)methyl]-3-oxidanylidene-2-(1~{H}-pyrrolo[3,2-b]pyridin-2-ylmethyl)-1~{H}-isoindole-1-carboxamide, 5'-DEOXY-5'-METHYLTHIOADENOSINE, Methylosome protein WDR77, ...
著者Debreczeni, J.
登録日2024-04-09
公開日2024-08-14
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery and In Vivo Efficacy of AZ-PRMT5i-1, a Novel PRMT5 Inhibitor with High MTA Cooperativity.
J.Med.Chem., 67, 2024
4P19
DownloadVisualize
BU of 4p19 by Molmil
Closed, apo inward-facing state of the glutamate transporter homologue GltPh
分子名称: 425aa long hypothetical proton glutamate symport protein, MERCURY (II) ION
著者Verdon, G, Boudker, O.
登録日2014-02-25
公開日2014-06-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
9BFN
DownloadVisualize
BU of 9bfn by Molmil
Cryo-EM co-structure of AcrB with the CU232 efflux pump inhibitor
分子名称: (2R)-1-(4-aminopiperidin-1-yl)-3-[3-(trifluoromethyl)phenoxy]propan-2-ol, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Multidrug efflux pump subunit AcrB
著者Su, C.C.
登録日2024-04-18
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Bacterial efflux pump modulators prevent bacterial growth in macrophages and under broth conditions that mimic the host environment.
mBio, 14, 2023
4P0Z
DownloadVisualize
BU of 4p0z by Molmil
Structure of the double stranded DNA binding type IV secretion protein TraN from Enterococcus
分子名称: AM32
著者Goessweiner-mohr, N, Fercher, C, Keller, W.
登録日2014-02-23
公開日2014-07-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure of the double-stranded DNA-binding type IV secretion protein TraN from Enterococcus.
Acta Crystallogr.,Sect.D, 70, 2014
9BFM
DownloadVisualize
BU of 9bfm by Molmil
Cryo-EM co-structure of AcrB with the EPM35 efflux pump inhibitor
分子名称: (2S)-1-(3,4-dichlorophenoxy)-3-(4-{[4-(trifluoromethyl)pyrimidin-2-yl]amino}piperidin-1-yl)propan-2-ol, Multidrug efflux pump subunit AcrB
著者Su, C.C.
登録日2024-04-18
公開日2024-05-08
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献Bacterial efflux pump modulators prevent bacterial growth in macrophages and under broth conditions that mimic the host environment.
mBio, 14, 2023
4PUS
DownloadVisualize
BU of 4pus by Molmil
Crystal Structure of Influenza A Virus Matrix Protein M1
分子名称: Matrix protein 1
著者Safo, M.K, Musayev, F.N, Mosier, P.D, Xie, H, Desai, U.R.
登録日2014-03-13
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of influenza a virus matrix protein m1: variations on a theme.
Plos One, 9, 2014
9B7B
DownloadVisualize
BU of 9b7b by Molmil
Crystal structure of humanized 44H10 Fab Version 22 in complex with HLA-DR (HLA-DRA*01:01/HLA-DRB1*04:01)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DR alpha chain, ...
著者Kassardjian, A, Julien, J.P.
登録日2024-03-27
公開日2024-08-07
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Humanization of Pan-HLA-DR mAb 44H10 Hinges on Critical Residues in the Antibody Framework.
Antibodies, 13, 2024
9CII
DownloadVisualize
BU of 9cii by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/L36R at cryogenic temperature
分子名称: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
著者Zhang, Y, Schlessman, J.L, Robinson, A.C, Garcia-Moreno E, B.
登録日2024-07-03
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of Staphylococcal nuclease variant Delta+PHS V23D/L36R at cryogenic temperature
To Be Published
4P1A
DownloadVisualize
BU of 4p1a by Molmil
Thallium-bound inward-facing state of the glutamate transporter homologue GltPh
分子名称: GltPh, MERCURY (II) ION, THALLIUM (I) ION
著者Verdon, G, Boudker, O.
登録日2014-02-25
公開日2014-06-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon