PDB: 66724 件ウェブページステータス検索Chemie searchBIRD

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2RKN	X-ray structure of the self-defense and signaling protein DIR1 from Arabidopsis taliana 分子名称: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, DIR1 protein, ZINC ION 著者 Lascombe, M.B, Prange, T, Buhot, N, Marion, D, Bakan, B, Lamb, C. 登録日 2007-10-17 公開日 2008-09-02 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The structure of "defective in induced resistance" protein of Arabidopsis thaliana, DIR1, reveals a new type of lipid transfer protein. Protein Sci., 17, 2008
2RKU	Structure of PLK1 in complex with BI2536 分子名称: 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide, D(-)-TARTARIC ACID, L(+)-TARTARIC ACID, ... 著者 Ding, Y.-H, Kothe, M, Kohls, D, Low, S. 登録日 2007-10-17 公開日 2008-02-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Selectivity-determining residues in Plk1. Chem.Biol.Drug Des., 70, 2007
2STB	ANIONIC SALMON TRYPSIN IN COMPLEX WITH SQUASH SEED INHIBITOR (CUCURBITA PEPO TRYPSIN INHIBITOR II) 分子名称: CALCIUM ION, PROTEIN (TRYPSIN INHIBITOR), PROTEIN (TRYPSIN) 著者 Helland, R, Berglund, G.I, Otlewski, J, Apostoluk, W, Andersen, O.A, Willassen, N.P, Smalas, A.O. 登録日 1998-12-11 公開日 2000-01-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 High-resolution structures of three new trypsin-squash-inhibitor complexes: a detailed comparison with other trypsins and their complexes. Acta Crystallogr.,Sect.D, 55, 1999
2TSB	AZURIN MUTANT M121A-AZIDE 分子名称: AZIDE ION, AZURIN AZIDE, COPPER (II) ION 著者 Tsai, L.-C, Bonander, N, Harata, K, Karlsson, B.G, Vanngard, T, Langer, V, Sjolin, L. 登録日 1996-05-10 公開日 1996-11-08 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Mutant Met121Ala of Pseudomonas aeruginosa azurin and its azide derivative: crystal structures and spectral properties. Acta Crystallogr.,Sect.D, 52, 1996
2RPN	A crucial role for high intrinsic specificity in the function of yeast SH3 domains 分子名称: Actin-binding protein, Actin-regulating kinase 1 著者 Stollar, E.J, Garcia, B, Chong, A, Forman-Kay, J, Davidson, A. 登録日 2008-06-12 公開日 2009-06-16 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural, functional, and bioinformatic studies demonstrate the crucial role of an extended peptide binding site for the SH3 domain of yeast Abp1p J.Biol.Chem., 284, 2009
5BPC	DNA polymerase beta ternary complex with a templating 5ClC and incoming dATP analog 分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CDO)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), ... 著者 Freudenthal, B.D, Wilson, S.H. 登録日 2015-05-28 公開日 2015-08-19 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer. Proc.Natl.Acad.Sci.USA, 112, 2015
2RCX	AmpC Beta-lactamase in complex with (1R)-1-(2-Thiophen-2-yl-acetylamino)-1-(3-(2-carboxyvinyl)-phenyl) methylboronic acid 分子名称: (1R)-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-1-(3-(2-CARBOXYVINYL)-PHENYL) METHYLBORONIC ACID, Beta-lactamase, PHOSPHATE ION 著者 Morandi, F, Morandi, S, Prati, F, Shoichet, B.K. 登録日 2007-09-20 公開日 2007-11-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-based optimization of cephalothin-analogue boronic acids as beta-lactamase inhibitors Bioorg.Med.Chem., 16, 2008
2RDA	Human Thymidylate Synthase Stabilized in Active Conformation by R163K Mutation: Asymmetry and Reactivity of Cys195 分子名称: BETA-MERCAPTOETHANOL, PHOSPHATE ION, Thymidylate synthase 著者 Gibson, L.M, Lovelace, L.L, Lebioda, L. 登録日 2007-09-21 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 The R163K mutant of human thymidylate synthase is stabilized in an active conformation: structural asymmetry and reactivity of cysteine 195. Biochemistry, 47, 2008
2RED	Crystal structures of C2ALPHA-PI3 kinase PX-domain domain indicate conformational change associated with ligand binding. 分子名称: GLYCEROL, Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide 著者 Parkinson, G.N, Vines, D, Driscoll, P.C, Djordjevic, S. 登録日 2007-09-26 公開日 2007-11-27 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of PI3K-C2alpha PX domain indicate conformational change associated with ligand binding Bmc Struct.Biol., 8, 2008
7AI5	MutS in Scanning state 分子名称: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*CP*GP*GP*TP*AP*CP*CP*CP*AP*AP*TP*TP*CP*GP*CP*CP*CP*TP*AP*TP*AP*G)-3'), DNA (5'-D(P*CP*TP*AP*TP*AP*GP*GP*GP*CP*GP*AP*AP*TP*TP*GP*GP*GP*TP*AP*CP*CP*G)-3'), ... 著者 Fernandez-Leiro, R, Bhairosing-Kok, D, Sixma, T.K, Lamers, M.H. 登録日 2020-09-26 公開日 2021-03-31 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 The selection process of licensing a DNA mismatch for repair. Nat.Struct.Mol.Biol., 28, 2021
2D4A	Structure of the malate dehydrogenase from Aeropyrum pernix 分子名称: Malate dehydrogenase 著者 Kawakami, R, Sakuraba, H, Tsuge, H, Ohshima, T. 登録日 2005-10-12 公開日 2006-11-14 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Refolding, characterization and crystal structure of (S)-malate dehydrogenase from the hyperthermophilic archaeon Aeropyrum pernix. Biochim.Biophys.Acta, 1794, 2009
2RER	Crystal structure of the aromatase/cyclase domain of TcmN from Streptomyces glaucescens 分子名称: Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN 著者 Ames, B.D, Korman, T.P, Vu, T.N, Tsai, S.C. 登録日 2007-09-26 公開日 2008-04-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure and functional analysis of tetracenomycin ARO/CYC: implications for cyclization specificity of aromatic polyketides. Proc.Natl.Acad.Sci.Usa, 105, 2008
2RFO	Crystral Structure of the nucleoporin Nic96 分子名称: Nucleoporin NIC96 著者 Schrader, N, Stelter, P, Flemming, D, Kunze, K, Hurt, E, Vetter, I.R. 登録日 2007-10-01 公開日 2008-01-29 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis of the nic96 subcomplex organization in the nuclear pore channel. Mol.Cell, 29, 2008
5BTS	Structural and biophysical characterization of a covalent insulin dimer formed during storage of neutral formulation of human insulin 分子名称: Insulin A chain, Insulin B chain 著者 Norrman, M, Hjorth, C.F. 登録日 2015-06-03 公開日 2016-03-09 最終更新日 2019-02-20 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structure, Aggregation, and Activity of a Covalent Insulin Dimer Formed During Storage of Neutral Formulation of Human Insulin. J.Pharm.Sci., 105, 2016
7ANT	Structure of CYP153A from Polaromonas sp. 分子名称: 1,2-ETHANEDIOL, Cytochrome P450, HEME C 著者 Zukic, E, Rowlinson, B, Sharma, M, Hoffman, S, Hauer, B, Grogan, G. 登録日 2020-10-12 公開日 2021-04-07 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Substrate Anchoring and Flexibility Reduction in CYP153AM.aq Leads to Highly Improved Efficiency toward Octanoic Acid Acs Catalysis, 11, 2021
2RDJ	Snapshots of a Y-family DNA polymerase in replication: Dpo4 in apo and binary/ternary complex forms 分子名称: CALCIUM ION, DNA (5'-D(*DGP*DGP*DGP*DAP*DCP*DCP*DCP*DTP*DTP*DCP*DGP*DAP*DAP*DT)-3'), DNA (5'-D(P*DTP*DAP*DTP*DTP*DCP*DGP*DAP*DAP*DGP*DGP*DGP*DTP*DCP*DCP*DC)-3'), ... 著者 Wong, J.H.Y, Ling, H. 登録日 2007-09-24 公開日 2008-06-24 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4. J.Mol.Biol., 379, 2008
2RH5	Structure of Apo Adenylate Kinase from Aquifex Aeolicus 分子名称: Adenylate kinase 著者 Thai, V, Wolf-Watz, M, Fenn, T, Pozharski, E, Wilson, M.A, Petsko, G.A, Kern, D. 登録日 2007-10-05 公開日 2007-12-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Intrinsic motions along an enzymatic reaction trajectory. Nature, 450, 2007
7B73	Insight into the molecular determinants of thermal stability in halohydrin dehalogenase HheD2. 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Short-chain dehydrogenase/reductase SDR 著者 Wessel, J, Petrillo, G, Estevez, M, Bosh, S, Seeger, M, Dijkman, W.P, Hidalgo, A, Uson, I, Osuna, S, Schallmey, A. 登録日 2020-12-09 公開日 2021-04-07 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Insights into the molecular determinants of thermal stability in halohydrin dehalogenase HheD2. Febs J., 288, 2021
7AGH	Crystal structure of SF kinase YihV from E. coli in complex with AMPPNP-Mg 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Sulfofructose kinase 著者 Sharma, M, Davies, G.J, Jin, Y. 登録日 2020-09-22 公開日 2021-04-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis. Acs Cent.Sci., 7, 2021
7AG7	Crystal structure of SFP aldolase YihT from Salmonella enterica in complex with sulfate bound at the active site 分子名称: SULFATE ION, Sulfofructosephosphate aldolase 著者 Sharma, M, Davies, G.J. 登録日 2020-09-21 公開日 2021-04-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis. Acs Cent.Sci., 7, 2021
7AO7	Structure of CYP153A from Polaromonas sp. in complex with octan-1-ol 分子名称: Cytochrome P450, OCTAN-1-OL, PROTOPORPHYRIN IX CONTAINING FE 著者 Zukic, E, Rowlinson, B, Sharma, M, Hoffmann, S, Hauer, B, Grogan, G. 登録日 2020-10-13 公開日 2021-04-07 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Substrate Anchoring and Flexibility Reduction in CYP153AM.aq Leads to Highly Improved Efficiency toward Octanoic Acid Acs Catalysis, 11, 2021
7AG4	Crystal structure of active site mutant of SQ Isomerase (YihS-H248A) from Salmonella enterica in complex with sulfofructose (SF) 分子名称: 6-deoxy-6-sulfo-D-fructose, Sulfoquinovose isomerase 著者 Sharma, M, Davies, G.J. 登録日 2020-09-21 公開日 2021-04-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.13 Å) 主引用文献 Molecular Basis of Sulfosugar Selectivity in Sulfoglycolysis. Acs Cent.Sci., 7, 2021
2RFF	Crystal structure of a putative nucleotidyltransferase (NP_343093.1) from Sulfolobus solfataricus at 1.40 A resolution 分子名称: 1,2-ETHANEDIOL, Putative nucleotidyltransferase 著者 Joint Center for Structural Genomics (JCSG) 登録日 2007-09-28 公開日 2007-10-16 最終更新日 2023-01-25 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Crystal structure of a putative nucleotidyltransferase (NP_343093.1) from Sulfolobus solfataricus at 1.40 A resolution To be published
7AGB	Protease Sapp1p from Candida parapsilosis in complex with KB70 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Candidapepsin, ... 著者 Dostal, J, Heidingsfeld, O, Brynda, J. 登録日 2020-09-22 公開日 2021-04-21 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural determinants for subnanomolar inhibition of the secreted aspartic protease Sapp1p from Candida parapsilosis . J Enzyme Inhib Med Chem, 36, 2021
2RFK	Substrate RNA Positioning in the Archaeal H/ACA Ribonucleoprotein Complex 分子名称: Probable tRNA pseudouridine synthase B, Ribosome biogenesis protein Nop10, Small nucleolar rnp similar to gar1, ... 著者 Liang, B, Xue, S, Terns, R.M, Terns, M.P, Li, H, Southeast Collaboratory for Structural Genomics (SECSG) 登録日 2007-09-30 公開日 2008-02-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Substrate RNA positioning in the archaeal H/ACA ribonucleoprotein complex. Nat.Struct.Mol.Biol., 14, 2007

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