Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SGD
DownloadVisualize
BU of 6sgd by Molmil
Nek2 kinase covalently bound to 2-arylamino-6-ethynylpurine inhibitor 24
分子名称: 4-[(6-ethenyl-7~{H}-purin-2-yl)amino]benzenesulfonamide, CHLORIDE ION, SODIUM ION, ...
著者Richards, M.W, Mas-Droux, C.P, Bayliss, R.
登録日2019-08-04
公開日2020-06-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献2-Arylamino-6-ethynylpurines are cysteine-targeting irreversible inhibitors of Nek2 kinase.
Rsc Med Chem, 11, 2020
5VU0
DownloadVisualize
BU of 5vu0 by Molmil
Crystal structure of the complex between afucosylated/galactosylated human IgG1 Fc and Fc gamma receptor IIIa (CD16A) with Man5 N-glycans
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Subedi, G.S, Marcella, A.M, Barb, A.W.
登録日2017-05-18
公開日2018-05-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Antibody Fucosylation Lowers the Fc gamma RIIIa/CD16a Affinity by Limiting the Conformations Sampled by the N162-Glycan.
ACS Chem. Biol., 13, 2018
6SAU
DownloadVisualize
BU of 6sau by Molmil
Structural and functional characterisation of three novel fungal amylases with enhanced stability and pH tolerance.
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, CALCIUM ION, SODIUM ION, ...
著者Roth, C, Moroz, O.V, Turkenburg, J.P, Blagova, E, Waterman, J, Ariza, A, Ming, L, Tinaqi, S, Andersen, C, Davies, G.J, Wilson, K.S.
登録日2019-07-17
公開日2019-10-23
最終更新日2023-03-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural and Functional Characterization of Three Novel Fungal Amylases with Enhanced Stability and pH Tolerance.
Int J Mol Sci, 20, 2019
6SED
DownloadVisualize
BU of 6sed by Molmil
Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB in complex with galactose
分子名称: ACETATE ION, Beta-galactosidase, FORMIC ACID, ...
著者Rutkiewicz, M, Bujacz, A, Kaminska, P, Bujacz, G.
登録日2019-07-29
公開日2019-09-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.233 Å)
主引用文献Active Site Architecture and Reaction Mechanism Determination of Cold Adapted beta-d-galactosidase fromArthrobactersp. 32cB.
Int J Mol Sci, 20, 2019
6VFR
DownloadVisualize
BU of 6vfr by Molmil
Crystal structure of human protocadherin 18 EC1-EC4
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Harrison, O.J, Brasch, J, Shapiro, L.
登録日2020-01-06
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Family-wide Structural and Biophysical Analysis of Binding Interactions among Non-clustered delta-Protocadherins.
Cell Rep, 30, 2020
5VMA
DownloadVisualize
BU of 5vma by Molmil
Structure of B. pumilus GH48 in complex with a cellobio-derived isofagomine
分子名称: (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl 4-O-beta-D-glucopyranosyl-beta-D-glucopyranoside, (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside, 1,2-ETHANEDIOL, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2017-04-27
公開日2018-10-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Bacillus pumilus family 48 glycoside hydrolase in complex with cellobio-derived isofagomine
To Be Published
7YVB
DownloadVisualize
BU of 7yvb by Molmil
Aplysia californica FaNaC in ligand bound state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FMRFamide-gated Na+ channel, ...
著者Chen, Q.F, Liu, F.L, Dang, Y, Feng, H, Zhang, Z, Ye, S.
登録日2022-08-19
公開日2023-08-09
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure and mechanism of a neuropeptide-activated channel in the ENaC/DEG superfamily.
Nat.Chem.Biol., 19, 2023
7YQS
DownloadVisualize
BU of 7yqs by Molmil
Neutron structure of a L-rhamnose-alpha-1,4-D-glucuronate lyase from Fusarium oxysporum 12S, L-Rha complex
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CALCIUM ION, ...
著者Yano, N, Kondo, T, Kusaka, K, Yamada, T, Arakawa, T, Sakamoto, T, Fushinobu, S.
登録日2022-08-08
公開日2023-08-09
最終更新日2024-03-27
実験手法NEUTRON DIFFRACTION (1.25 Å), X-RAY DIFFRACTION
主引用文献Charge neutralization and beta-elimination cleavage mechanism of family 42 L-rhamnose-alpha-1,4-D-glucuronate lyase revealed using neutron crystallography.
J.Biol.Chem., 300, 2024
7YVC
DownloadVisualize
BU of 7yvc by Molmil
Aplysia californica FaNaC in apo state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Chen, Q.F, Liu, F.L, Dang, Y, Feng, H, Zhang, Z, Ye, S.
登録日2022-08-19
公開日2023-08-09
最終更新日2023-10-11
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure and mechanism of a neuropeptide-activated channel in the ENaC/DEG superfamily.
Nat.Chem.Biol., 19, 2023
7YPZ
DownloadVisualize
BU of 7ypz by Molmil
Zafirlukast in complex with CRM1-Ran-RanBP1
分子名称: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CHLORIDE ION, ...
著者Sun, Q, Lei, Y.
登録日2022-08-05
公開日2023-08-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Searching for Novel Noncovalent Nuclear Export Inhibitors through a Drug Repurposing Approach.
J.Med.Chem., 66, 2023
6V7Z
DownloadVisualize
BU of 6v7z by Molmil
Human CD1d presenting alpha-Galactosylceramide in complex with VHH nanobody 1D22
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d, ...
著者Shahine, A, Rossjohn, J.
登録日2019-12-10
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A single-domain bispecific antibody targeting CD1d and the NKT T-cell receptor induces a potent antitumor response.
Nat Cancer, 2020
7Z3F
DownloadVisualize
BU of 7z3f by Molmil
Crystal structure of the cupredoxin AcoP from Acidithiobacillus ferrooxidans, oxidized form
分子名称: ACETATE ION, AcoP, CHLORIDE ION, ...
著者Leone, P, Sciara, G, Ilbert, M.
登録日2022-03-02
公開日2023-09-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Beyond the coupled distortion model: structural analysis of the single domain cupredoxin AcoP, a green mononuclear copper centre with original features.
Dalton Trans, 53, 2024
6V04
DownloadVisualize
BU of 6v04 by Molmil
DynU16 crystal structure, a putative protein in the dynemicin biosynthetic locus
分子名称: CHLORIDE ION, MAGNESIUM ION, SODIUM ION, ...
著者Alvarado, S.K, Miller, M.D, Bhardwaj, M, Thorson, J.S, Van Lanen, S.G, Phillips Jr, G.N.
登録日2019-11-18
公開日2020-11-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural characterization of DynU16, a START/Bet v1-like protein involved in dynemicin biosynthesis.
Acta Crystallogr.,Sect.F, 77, 2021
3SAN
DownloadVisualize
BU of 3san by Molmil
Crystal structure of influenza A virus neuraminidase N5 complexed with Zanamivir
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Wang, M.Y, Qi, J.X, Liu, Y, Vavricka, C.J, Wu, Y, Li, Q, Gao, G.F.
登録日2011-06-03
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Influenza a virus n5 neuraminidase has an extended 150-cavity
J.Virol., 85, 2011
7Z94
DownloadVisualize
BU of 7z94 by Molmil
Crystal structure of Variovorax paradoxus indole monooxygenase (VpIndA1) in complex with indole
分子名称: DIMETHYL SULFOXIDE, FLAVIN-ADENINE DINUCLEOTIDE, INDOLE, ...
著者Kratky, J, Weisse, R, Strater, N.
登録日2022-03-19
公開日2023-02-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural and Mechanistic Studies on Substrate and Stereoselectivity of the Indole Monooxygenase VpIndA1: New Avenues for Biocatalytic Epoxidations and Sulfoxidations.
Angew.Chem.Int.Ed.Engl., 62, 2023
4TVT
DownloadVisualize
BU of 4tvt by Molmil
New ligand for thaumatin discovered using acoustic high throughput screening
分子名称: ASCORBIC ACID, L(+)-TARTARIC ACID, SODIUM ION, ...
著者Teplitsky, E, Joshi, K, Ericson, D.L, Scalia, A, Mullen, J.D, Sweet, R.M, Soares, A.S.
登録日2014-06-28
公開日2014-07-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献High throughput screening using acoustic droplet ejection to combine protein crystals and chemical libraries on crystallization plates at high density.
J.Struct.Biol., 191, 2015
7YYG
DownloadVisualize
BU of 7yyg by Molmil
Crystal structure of gatekeeper of type III secretion system in Bordetella BopN
分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Prudnikova, T, Kuta Smatanova, I, Kamanova, J, Bumba, L.
登録日2022-02-17
公開日2023-03-01
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献BopN is a Gatekeeper of the Bordetella Type III Secretion System.
Microbiol Spectr, 11, 2023
7YU1
DownloadVisualize
BU of 7yu1 by Molmil
Structure of 6-aminohexanoate-oligomer hydrolase NylC precursor, D122G/H130Y/T267C mutant
分子名称: 6-aminohexanoate-oligomer endohydrolase, GLYCEROL, SODIUM ION, ...
著者Negoro, S, Higuchi, Y.
登録日2022-08-16
公開日2023-03-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献X-ray crystallographic and mutational analysis of the NylC precursor: catalytic mechanism of autocleavage and substrate hydrolysis of nylon hydrolase.
Febs J., 290, 2023
7YU0
DownloadVisualize
BU of 7yu0 by Molmil
Structure of 6-aminohexanoate-oligomer hydrolase NylC precursor, H130Y/N266A/T267A mutant
分子名称: 6-aminohexanoate-oligomer endohydrolase, GLYCEROL, SODIUM ION, ...
著者Negoro, S, Higuchi, Y.
登録日2022-08-16
公開日2023-03-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献X-ray crystallographic and mutational analysis of the NylC precursor: catalytic mechanism of autocleavage and substrate hydrolysis of nylon hydrolase.
Febs J., 290, 2023
6VEA
DownloadVisualize
BU of 6vea by Molmil
Structure of the Glutamate-Like Receptor GLR3.2 ligand-binding domain in complex with Glycine
分子名称: BETA-MERCAPTOETHANOL, GLYCINE, Glutamate receptor 3.2, ...
著者Gangwar, S.P, Green, M.N, Yoder, J.B, Sobolevsky, A.I.
登録日2019-12-30
公開日2020-09-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure of the Arabidopsis Glutamate Receptor-like Channel GLR3.2 Ligand-Binding Domain.
Structure, 29, 2021
7Z6J
DownloadVisualize
BU of 7z6j by Molmil
X-ray structure of the adduct obtained upon reaction of [Rh2(OCOCH3)(OCOCF3)3] with HEWL
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme, Rhodium, ...
著者Loreto, D, Merlino, A.
登録日2022-03-11
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins
Dalton Trans, 51, 2022
7Z6T
DownloadVisualize
BU of 7z6t by Molmil
Aspergillus clavatus M36 protease without the propeptide
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Extracellular metalloproteinase mep, ...
著者Wilkens, C, Qiu, J, Meyer, A.S, Morth, J.P.
登録日2022-03-14
公開日2023-03-22
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Aspergillus clavatus M36 protease without the propeptide
To Be Published
7YRQ
DownloadVisualize
BU of 7yrq by Molmil
Cryo-EM structure of human Peroxisomal ABC Transporter ABCD1
分子名称: ATP-binding cassette sub-family D member 1, [(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate
著者Chao, X, Li-Na, J, Lin, T.
登録日2022-08-10
公開日2023-03-22
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural insights into substrate recognition and translocation of human peroxisomal ABC transporter ALDP.
Signal Transduct Target Ther, 8, 2023
7Z3U
DownloadVisualize
BU of 7z3u by Molmil
Crystal structure of SARS-CoV-2 Main Protease after incubation with Sulfo-Calpeptin
分子名称: 3C-like proteinase nsp5, CHLORIDE ION, Calpetin, ...
著者Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A.
登録日2022-03-02
公開日2023-03-22
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Calpeptin is a potent cathepsin inhibitor and drug candidate for SARS-CoV-2 infections.
Commun Biol, 6, 2023
5VPE
DownloadVisualize
BU of 5vpe by Molmil
Transcription factor FosB/JunD bZIP domain in complex with cognate DNA, type-I crystal
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*GP*TP*CP*GP*GP*TP*GP*AP*CP*TP*CP*AP*CP*CP*GP*AP*CP*G)-3'), ...
著者Yin, Z, Machius, M, Rudenko, G.
登録日2017-05-04
公開日2017-09-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.053 Å)
主引用文献Activator Protein-1: redox switch controlling structure and DNA-binding.
Nucleic Acids Res., 45, 2017

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon