PDB: 66724 件ウェブページステータス検索Chemie searchBIRD

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6W43	APE1 AP-endonuclease product complex R237C 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Freudenthal, B.D, Whitaker, A.M. 登録日 2020-03-10 公開日 2020-06-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.), 91-92, 2020
2V79	Crystal Structure of the N-terminal domain of DnaD from Bacillus Subtilis 分子名称: CHLORIDE ION, DNA REPLICATION PROTEIN DNAD, SODIUM ION 著者 Schneider, S, Zhang, W, Soultanas, P, Paoli, M. 登録日 2007-07-27 公開日 2008-01-15 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the N-Terminal Oligomerization Domain of Dnad Reveals a Unique Tetramerization Motif and Provides Insights Into Scaffold Formation. J.Mol.Biol., 376, 2008
8TFL	Ricin in complex with Fab SylH3 分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, NONAETHYLENE GLYCOL, ... 著者 Rudolph, M.J, Mantis, N. 登録日 2023-07-11 公開日 2024-04-17 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Structural Basis of Antibody-Mediated Inhibition of Ricin Toxin Attachment to Host Cells. Biochemistry, 62, 2023
3LL9	X-ray structures of isopentenyl phosphate kinase 分子名称: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Isopentenyl phosphate kinase 著者 Hill, C.P, Schubert, H.L. 登録日 2010-01-28 公開日 2010-06-02 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.148 Å) 主引用文献 X-ray structures of isopentenyl phosphate kinase. Acs Chem.Biol., 5, 2010
8TFH	Ricin in complex with Fab JB4 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, JB4 monoclonal antibody heavy chain, ... 著者 Rudolph, M.J, Mantis, N. 登録日 2023-07-11 公開日 2024-04-17 実験手法 X-RAY DIFFRACTION (3.29 Å) 主引用文献 Structural Basis of Antibody-Mediated Inhibition of Ricin Toxin Attachment to Host Cells. Biochemistry, 62, 2023
4G1P	Structural and Mechanistic Basis of Substrate Recognition by Novel Di-peptidase Dug1p From Saccharomyces cerevisiae 分子名称: CYSTEINE, Cys-Gly metallodipeptidase DUG1, GLYCINE, ... 著者 Singh, A.K, Singh, M, Pandya, V.K, Singh, V, Mittal, M, Kumaran, S. 登録日 2012-07-11 公開日 2013-07-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.547 Å) 主引用文献 Structural and Mechanistic Basis of Substrate Recognition by Novel Di-peptidase Dug1p From Saccromyces cerevesiae To be published
3L5W	Crystal structure of the complex between IL-13 and C836 FAB 分子名称: C836 HEAVY CHAIN, C836 LIGHT CHAIN, GLYCEROL, ... 著者 Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L. 登録日 2009-12-22 公開日 2010-04-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Human framework adaptation of a mouse anti-human IL-13 antibody. J.Mol.Biol., 398, 2010
6W4I	APE1 Y269A product complex with abasic DNA 分子名称: DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3'), DNA (5'-D(P*(3DR)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3'), DNA (5'-D(P*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... 著者 Freudenthal, B.D, Hoitsma, N.M. 登録日 2020-03-10 公開日 2020-06-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop. Nucleic Acids Res., 48, 2020
4E2F	Crystal Structure of E. coli Aspartate Transcarbamoylase K164E/E239K Mutant in an intermediate state 分子名称: Aspartate carbamoyltransferase catalytic chain, Aspartate carbamoyltransferase regulatory chain, ZINC ION 著者 Guo, W, Kantrowitz, E.R. 登録日 2012-03-08 公開日 2012-05-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Trapping and structure determination of an intermediate in the allosteric transition of aspartate transcarbamoylase. Proc.Natl.Acad.Sci.USA, 109, 2012
3LHP	Crystal structure of HIV epitope-scaffold 4E10_D0_1ISEA_004_N 4E10 Fv complex 分子名称: 1,2-ETHANEDIOL, 4E10_D0_1ISEA_004_N (T93), Fv 4E10 heavy chain, ... 著者 Holmes, M.A. 登録日 2010-01-22 公開日 2010-09-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010
4DY9	Leishmania major Peroxidase is a Cytochrome c Peroxidase 分子名称: Cytochrome c, PROTOPORPHYRIN IX CONTAINING FE 著者 Jasion, V.S, Poulos, T.L. 登録日 2012-02-28 公開日 2012-03-14 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.082 Å) 主引用文献 Leishmania major Peroxidase Is a Cytochrome c Peroxidase. Biochemistry, 51, 2012
4GIG	crystal structure of T69A mutant of trapped Dnae intein precursor 分子名称: DNA polymerase III subunit alpha, SULFATE ION 著者 Van Roey, P. 登録日 2012-08-08 公開日 2013-03-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A conserved threonine spring-loads precursor for intein splicing. Protein Sci., 22, 2013
3L7E	Crystal structure of ANTI-IL-13 antibody C836 分子名称: ACETATE ION, C836 HEAVY CHAIN, C836 LIGHT CHAIN, ... 著者 Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L. 登録日 2009-12-28 公開日 2010-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Antigen recognition by antibody C836 through adjustment of VL/VH packing Acta Crystallogr.,Sect.F, 67, 2011
2J2I	Crystal Structure of the humab PIM1 in complex with LY333531 分子名称: (9R)-9-[(DIMETHYLAMINO)METHYL]-6,7,10,11-TETRAHYDRO-9H,18H-5,21:12,17-DIMETHENODIBENZO[E,K]PYRROLO[3,4-H][1,4,13]OXADIA ZACYCLOHEXADECINE-18,20-DIONE, PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE PIM-1, SULFATE ION 著者 Debreczeni, J.E, Bullock, A.N, von Delft, F, Sundstrom, M, Arrowsmith, C, Edwards, A, Weigelt, J, Knapp, S. 登録日 2006-08-16 公開日 2007-02-13 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A systematic interaction map of validated kinase inhibitors with Ser/Thr kinases. Proc. Natl. Acad. Sci. U.S.A., 104, 2007
3LQU	Crystal structure of 3,4-Dihydroxy-2-butanone 4-phosphate synthase complexed with Ribulose-5 phosphate 分子名称: 3,4-dihydroxy-2-butanone 4-phosphate synthase, 5-O-phosphono-D-xylulose 著者 Kumar, P, Karthikeyan, S. 登録日 2010-02-10 公開日 2010-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.522 Å) 主引用文献 Potential anti-bacterial drug target: structural characterization of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Salmonella typhimurium LT2. Proteins, 78, 2010
2VOE	Crystal structure of Rv2780 from M. tuberculosis H37Rv 分子名称: ALANINE DEHYDROGENASE 著者 Tripathi, S.M, Ramachandran, R. 登録日 2008-02-17 公開日 2008-03-04 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structures of the Mycobacterium Tuberculosis Secretory Antigen Alanine Dehydrogenase (Rv2780) in Apo and Ternary Complex Forms Captures "Open" and "Closed" Enzyme Conformations. Proteins, 72, 2008
3L7F	Structure of IL-13 antibody H2L6, A humanized variant OF C836 分子名称: CALCIUM ION, H2L6 HEAVY CHAIN, H2L6 LIGHT CHAIN, ... 著者 Teplyakov, A, Obmolova, G, Malia, T, Gilliland, G.L. 登録日 2009-12-28 公開日 2010-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Human framework adaptation of a mouse anti-human IL-13 antibody. J.Mol.Biol., 398, 2010
3LH2	Crystal structure of HIV epitope-scaffold 4E10_1VI7A_S0_002_N 4E10 Fv complex 分子名称: 4E10_1VI7A_S0_002_N (T88), Fv 4E10 heavy chain, Fv 4E10 light chain 著者 Holmes, M.A. 登録日 2010-01-21 公開日 2010-09-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope. Structure, 18, 2010
6VX2	HIV Integrase core domain in complex with inhibitor (5-methyl-1-benzofuran-3-yl)acetic acid 分子名称: (5-methyl-1-benzofuran-3-yl)acetic acid, IODIDE ION, Integrase, ... 著者 Gorman, M.A, Parker, M.W. 登録日 2020-02-21 公開日 2021-02-24 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 HIV Integrase core domain in complex with inhibitor (5-methyl-1-benzofuran-3-yl)acetic acid To Be Published
3LUG	Crystal structure of MID domain from hAGO2 in complex with CMP 分子名称: CYTIDINE-5'-MONOPHOSPHATE, PHOSPHATE ION, Protein argonaute-2 著者 Frank, F, Sonenberg, N, Nagar, B. 登録日 2010-02-17 公開日 2010-05-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.849 Å) 主引用文献 Structural basis for 5'-nucleotide base-specific recognition of guide RNA by human AGO2. Nature, 465, 2010
6W0U	HIV Integrase core domain in complex with inhibitor 2-(2-ethynyl-5-methyl-1-benzofuran-3-yl)acetic acid 分子名称: 2-(2-ethynyl-5-methyl-1-benzofuran-3-yl)ethanoic acid, IODIDE ION, Integrase, ... 著者 Gorman, M.A, Parker, M.W. 登録日 2020-03-02 公開日 2021-03-03 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 HIV Integrase core domain in complex with inhibitor To Be Published
8T52	HIV-1 Integrase Catalytic Core Domain (CCD) F185H/Y99H/A128T Mutant Complexed with EKC-110 分子名称: (2S)-tert-butoxy{4-(4-chlorophenyl)-2,6-dimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid, Integrase 著者 Dinh, T, Kvaratskhelia, M. 登録日 2023-06-12 公開日 2024-06-19 最終更新日 2024-07-31 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 The structural and mechanistic bases for the viral resistance to allosteric HIV-1 integrase inhibitor pirmitegravir. Biorxiv, 2024
6W42	HIV Integrase core domain in complex with inhibitor 2-(5-methyl-2-(2-(thiophen-2-yl)ethynyl)-1-benzofuran-3-yl)acetic acid 分子名称: 2-[5-methyl-2-(2-thiophen-2-ylethynyl)-1-benzofuran-3-yl]ethanoic acid, HIV Integrase catalytic domain, IODIDE ION, ... 著者 Gorman, M.A, Parker, M.W. 登録日 2020-03-09 公開日 2021-03-10 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 HIV Integrase core domain in complex with inhibitor (5-methyl-1-benzofuran-3-yl)acetic acid To Be Published
6W11	The structure of Sulfolobus solfataricus Csa3 in complex with cyclic tetraadenylate (cA4) 分子名称: CRISPR locus-related putative DNA-binding protein Csa3, cA4 著者 Charbonneau, A.A, Gauvin, C.C, Lawrence, C.M. 登録日 2020-03-03 公開日 2021-03-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.46 Å) 主引用文献 Cyclic Tetra-Adenylate (cA 4 ) Recognition by Csa3; Implications for an Integrated Class 1 CRISPR-Cas Immune Response in Saccharolobus solfataricus. Biomolecules, 11, 2021
6W6T	WT HIV-1 Protease in Complex with Phosphonated UMass6 (PU6) 分子名称: Protease, SULFATE ION, diethyl [(4-{(2S,3R)-4-{[(4-aminophenyl)sulfonyl](2-ethylbutyl)amino}-2-[({[(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl]oxy}carbonyl)amino]-3-hydroxybutyl}phenoxy)methyl]phosphonate 著者 Lockbaum, G.J, Henes, M, Kosovrasti, K, Nalivaika, E.A, Ali, A, KurtYilmaz, N, Schiffer, C.A. 登録日 2020-03-17 公開日 2021-03-17 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 To Be Determined To Be Published

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