PDB: 66724 件ウェブページステータス検索Chemie searchBIRD

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3LY3	Crystal Structure of fluorophore-labeled Class A Beta-lactamase PenP 分子名称: Beta-lactamase 著者 Zhao, Y.X, Leung, Y.C, Wong, W.T. 登録日 2010-02-26 公開日 2011-03-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of fluorophore-labeled Class A Beta-lactamase PenP To be Published
3LY4	Crystal Structure of fluorophore-labeled Class A -lactamase PenP-E166Cb in complex with penicillin G 分子名称: Beta-lactamase, OPEN FORM - PENICILLIN G 著者 Zhao, Y.X, Leung, Y.C, Wong, W.T. 登録日 2010-02-26 公開日 2011-03-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure of fluorophore-labeled Class A -lactamase PenP-E166Cb in complex with penicillin G To be Published
3M9F	HIV protease complexed with compound 10b 分子名称: CHLORIDE ION, HIV-1 protease, N-[(1S,5S)-5-{[(4-aminophenyl)sulfonyl](3-methylbutyl)amino}-1-methyl-6-oxohexyl]-Nalpha-(methoxycarbonyl)-beta-phenyl-L-phenylalaninamide 著者 Su, H.P. 登録日 2010-03-22 公開日 2010-06-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Epsilon substituted lysinol derivatives as HIV-1 protease inhibitors. Bioorg.Med.Chem.Lett., 20, 2010
7XJO	Crystal structure of human MMP-2 catalytic domain in complex with inhibitor 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Kamitani, M, Mima, M, Takeuchi, T. 登録日 2022-04-18 公開日 2022-06-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Discovery of Aryloxyphenyl-Heptapeptide Hybrids as Potent and Selective Matrix Metalloproteinase-2 Inhibitors for the Treatment of Idiopathic Pulmonary Fibrosis. J.Med.Chem., 65, 2022
3MIL	Crystal structure of isoamyl acetate-hydrolyzing esterase from Saccharomyces cerevisiae 分子名称: GLYCEROL, Isoamyl acetate-hydrolyzing esterase 著者 Ma, J, Lu, Q, Yuan, Y, Li, K, Ge, H, Go, Y, Niu, L, Teng, M. 登録日 2010-04-11 公開日 2010-11-24 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of isoamyl acetate-hydrolyzing esterase from Saccharomyces cerevisiae reveals a novel active site architecture and the basis of substrate specificity Proteins, 79, 2011
7XGJ	Crystal structure of human MMP-2 catalytic domain in complex with inhibitor 分子名称: CALCIUM ION, GZS-ASN-ASP-ALA-LEU-IML-EOE-NH2, Matrix metalloproteinase-2, ... 著者 Kamitani, M, Mima, M, Takeuchi, T. 登録日 2022-04-05 公開日 2022-06-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Discovery of Aryloxyphenyl-Heptapeptide Hybrids as Potent and Selective Matrix Metalloproteinase-2 Inhibitors for the Treatment of Idiopathic Pulmonary Fibrosis. J.Med.Chem., 65, 2022
3M2K	Crystal Structure of fluorescein-labeled Class A -beta lactamase PenP in complex with cefotaxime 分子名称: Beta-lactamase, CEFOTAXIME, C3' cleaved, ... 著者 Zhao, Y.X, Leung, Y.C, Wong, W.T. 登録日 2010-03-07 公開日 2011-03-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural studies of the mechanism for biosensing antibiotics in a fluorescein-labeled beta-lactamase. BMC Struct. Biol., 11, 2011
5MVH	Glycoside Hydrolase BACCELL_00856 分子名称: BACCELL_00856 著者 Munoz-Munoz, J, Cartmell, A, Terrapon, N, Henrissat, B, Gilbert, H.J. 登録日 2017-01-16 公開日 2017-04-26 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Unusual active site location and catalytic apparatus in a glycoside hydrolase family. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7XQC	Crystal structure of N-terminal domain of Rv2908c fused with Maltose Binding Protein (MBP) 分子名称: DI(HYDROXYETHYL)ETHER, Fusion protein of Maltose-binding periplasmic protein and RNA-binding protein KhpA 著者 Thakur, K.G, Singh, A, Kapoor, S, Deep, A. 登録日 2022-05-07 公開日 2023-05-17 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of N-terminal domain of Rv2908c fused with Maltose Binding Protein (MBP) To Be Published
5N4E	Prolyl oligopeptidase B from Galerina marginata bound to 35mer hydrolysis and macrocyclization substrate - H698A mutant 分子名称: Alpha-amanitin proprotein, GLYCEROL, Prolyl oligopeptidase 著者 Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H. 登録日 2017-02-10 公開日 2017-11-01 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates. Nat Commun, 8, 2017
5N0W	Crystal structure of OphA-DeltaC6 mutant R72A in complex with SAM 分子名称: GLYCEROL, Peptide N-methyltransferase, S-ADENOSYLMETHIONINE 著者 Song, H, Naismith, J.H. 登録日 2017-02-03 公開日 2018-02-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds. Sci Adv, 4, 2018
4DG5	Crystal structure of staphylococcal Phosphoglycerate kinase 分子名称: Phosphoglycerate kinase 著者 Roychowdhury, A, Mukherjee, S, Dutta, D, Das, A.K. 登録日 2012-01-25 公開日 2013-01-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure based functional analysis of Staphylococcal Phosphoglycerate kinase To be Published
5N27	X-ray structure of human heavy chain ferritin (apo form) 分子名称: CHLORIDE ION, Ferritin heavy chain, MAGNESIUM ION 著者 Ferraro, G, Merlino, A. 登録日 2017-02-07 公開日 2017-08-02 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Cisplatin Binding Sites in Human H-Chain Ferritin. Inorg Chem, 56, 2017
5NJ1	The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme and arsenoplatin-1 分子名称: 1,2-ETHANEDIOL, Lysozyme C, NITRATE ION, ... 著者 Ferraro, G, Merlino, A. 登録日 2017-03-27 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Arsenoplatin-1 Is a Dual Pharmacophore Anticancer Agent. J.Am.Chem.Soc., 141, 2019
5D3Z	Crystal structure of the thioesterase domain of deoxyerythronolide B synthase in complex with a small phosphonate inhibitor 分子名称: CALCIUM ION, Erythronolide synthase, modules 5 and 6, ... 著者 Bergeret, F, Argyropoulos, P, Boddy, C.N, Schmeing, T.M. 登録日 2015-08-06 公開日 2015-12-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Towards a characterization of the structural determinants of specificity in the macrocyclizing thioesterase for deoxyerythronolide B biosynthesis. Biochim.Biophys.Acta, 1860, 2015
7WPJ	Methionyl-tRNA synthetase from Staphylococcus aureus 分子名称: 1,2-ETHANEDIOL, Methionine--tRNA ligase 著者 Yi, J, Cai, Z, Qiu, H, Lu, F, Chen, B, Luo, Z, Gu, Q, Xu, J, Zhou, H. 登録日 2022-01-24 公開日 2022-04-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Fragment screening and structural analyses highlight the ATP-assisted ligand binding for inhibitor discovery against type 1 methionyl-tRNA synthetase. Nucleic Acids Res., 50, 2022
4ESI	Structure of ricin A chain bound with N-((1H-1,2,3-triazol-4-yl)methyl-2-amino-4-oxo-3,4-dihydropteridine-7-carboxamide 分子名称: 2-amino-4-oxo-N-(1H-1,2,3-triazol-5-ylmethyl)-1,4-dihydropteridine-7-carboxamide, Ricin 著者 Jasheway, K.R, Pruet, J.M, Ryoto, S, Manzano, L.A, Wiget, P.A, Kamat, I, Anslyn, E.V, Monzingo, A.F, Robertus, J.D. 登録日 2012-04-23 公開日 2012-10-31 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Optimized 5-membered heterocycle-linked pterins for the inhibition of Ricin Toxin A. ACS Med Chem Lett, 3, 2012
5N0S	Crystal structure of OphA-DeltaC6 mutant Y98A in complex with SAM 分子名称: MALONATE ION, Peptide N-methyltransferase, S-ADENOSYLMETHIONINE 著者 Song, H, Naismith, J.H. 登録日 2017-02-03 公開日 2018-02-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds. Sci Adv, 4, 2018
5DOG	Crystal structure of human carbonic anhydrase isozyme II with 2-(Benzylamino)-3,5,6-trifluoro-4-[(2-phenylethyl)thio]benzene- sulfonamide 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-(benzylamino)-3,5,6-trifluoro-4-[(2-phenylethyl)sulfanyl]benzenesulfonamide, BICINE, ... 著者 Smirnov, A, Manakova, E, Grazulis, S. 登録日 2015-09-11 公開日 2016-09-28 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Intrinsic Thermodynamics and Structures of 2,4- and 3,4-Substituted Fluorinated Benzenesulfonamides Binding to Carbonic Anhydrases. ChemMedChem, 12, 2017
5LKW	Crystal structure of the peptidoglycan-associated lipoprotein (Pal) from Burkholderia cepacia in complex with DAP 分子名称: 2,6-DIAMINOPIMELIC ACID, Putative OmpA family lipoprotein 著者 Romano, M, Ruggiero, A, Berisio, R. 登録日 2016-07-25 公開日 2017-08-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Burkholderia cenocepacia peptidoglycan-associated lipoprotein is involved in epithelial cell attachment and elicitation of inflammation. Cell. Microbiol., 19, 2017
5NJ7	The X-ray structure of the adduct formed in the reaction between bovine pancreatic ribonuclease and arsenoplatin-1 分子名称: Ribonuclease pancreatic, arsenoplatin-1 著者 Ferraro, G, Merlino, A. 登録日 2017-03-28 公開日 2018-05-16 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Arsenoplatin-1 Is a Dual Pharmacophore Anticancer Agent. J.Am.Chem.Soc., 141, 2019
5DMU	Structure of the NHEJ polymerase from Methanocella paludicola 分子名称: 1,2-ETHANEDIOL, GLYCEROL, NHEJ Polymerase, ... 著者 Brissett, N.C, Bartlett, E.J, Doherty, A.J. 登録日 2015-09-09 公開日 2015-10-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.949 Å) 主引用文献 Molecular basis for DNA strand displacement by NHEJ repair polymerases. Nucleic Acids Res., 44, 2016
7X2Y	Crystal Structure of cis-4,5-dihydrodiol phthalate dehydrogenase in complex with NAD+ and 3-Hydroxybenzoate 分子名称: 3-HYDROXYBENZOIC ACID, 4,5-dihydroxyphthalate dehydrogenase, DI(HYDROXYETHYL)ETHER, ... 著者 Sharma, M, Mahto, J.K, Kumar, P. 登録日 2022-02-26 公開日 2022-09-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Conformational flexibility enables catalysis of phthalate cis-4,5-dihydrodiol dehydrogenase. Arch.Biochem.Biophys., 727, 2022
5O7K	Crystal structure of a single chain monellin mutant (Y65R) pH 2.0 分子名称: Monellin chain B,Monellin chain A, SULFATE ION 著者 Pica, A, Merlino, A. 登録日 2017-06-09 公開日 2018-01-10 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 pH driven fibrillar aggregation of the super-sweet protein Y65R-MNEI: A step-by-step structural analysis. Biochim. Biophys. Acta, 1862, 2017
7YF6	Crystal structure of HIV-1 protease in complex with macrocyclic peptide 分子名称: MAGNESIUM ION, Macrocyclic Peptide, Protease 著者 Kusumoto, Y, Sato, S, Yamada, T, Kozono, I, Nakata, Z, Asada, N, Mitsuki, S, Wakasa-Morimoto, C, Tohru, M, Watanabe, A, Hayashi, K, Mikamiyama, H. 登録日 2022-07-07 公開日 2022-11-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Highly Potent and Oral Macrocyclic Peptides as a HIV-1 Protease Inhibitor: mRNA Display-Derived Hit-to-Lead Optimization. Acs Med.Chem.Lett., 13, 2022

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