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5BRH
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Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor DBT-GlcN
分子名称: 2-deoxy-2-({[(1,1-dioxido-1-benzothiophen-2-yl)methoxy]carbonyl}amino)-beta-D-glucopyranose, Glucokinase 1, putative
著者D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
登録日2015-05-30
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
3KO9
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DTD from Plasmodium falciparum in complex with D-Arginine
分子名称: D-ARGININE, D-tyrosyl-tRNA(Tyr) deacylase
著者Manickam, Y, Bhatt, T.K, Sharma, A.
登録日2009-11-13
公開日2009-12-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Ligand-bound Structures Provide Atomic Snapshots for the Catalytic Mechanism of D-Amino Acid Deacylase
J.Biol.Chem., 285, 2010
7MW7
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Crystal structure of P1G mutant of D-dopachrome tautomerase
分子名称: D-dopachrome decarboxylase, SODIUM ION, SULFATE ION
著者Manjula, R, Murphy, E.L, Murphy, J.W, Lolis, E.
登録日2021-05-15
公開日2021-08-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A structurally preserved allosteric site in the MIF superfamily affects enzymatic activity and CD74 activation in D-dopachrome tautomerase.
J.Biol.Chem., 297, 2021
3L8F
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Crystal Structure of D,D-heptose 1.7-bisphosphate phosphatase from E. Coli complexed with magnesium and phosphate
分子名称: D,D-heptose 1,7-bisphosphate phosphatase, MAGNESIUM ION, PHOSPHATE ION, ...
著者Nguyen, H, Peisach, E, Allen, K.N.
登録日2009-12-31
公開日2010-02-02
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural Determinants of Substrate Recognition in the HAD Superfamily Member d-glycero-d-manno-Heptose-1,7-bisphosphate Phosphatase (GmhB) .
Biochemistry, 49, 2010
4TM5
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BU of 4tm5 by Molmil
X-ray crystal structure of a D-amino acid aminotransferase from Burkholderia thailandensis E264 bound to the co-factor pyridoxal phosphate
分子名称: D-amino acid aminotransferase
著者Fairman, J.W, Taylor, B.M, Edwards, T.E, Lorimer, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-05-31
公開日2014-07-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献X-ray crystal structure of a D-amino acid aminotransferase from Burkholderia thailandensis E264 bound to the co-factor pyridoxal phosphate
To Be Published
2W2L
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BU of 2w2l by Molmil
Crystal structure of the holo forms of Rhodotorula graminis D- mandelate dehydrogenase at 2.5A.
分子名称: D-MANDELATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
著者Vachieri, S.G, Cole, A.R, Bagneris, C, Baker, D.P, Fewson, C.A, Basak, A.K.
登録日2008-11-02
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of the Apo and Holo Forms of Rhodotorula Graminis D(-)-Mandelate Dehydrogenase
To be Published
7MRV
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BU of 7mrv by Molmil
F100A mutant structure of MIF2 (D-DT)
分子名称: D-dopachrome decarboxylase, SULFATE ION
著者Murphy, E.L, Manjula, R, Murphy, J.W, Lolis, E.
登録日2021-05-09
公開日2021-08-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献A structurally preserved allosteric site in the MIF superfamily affects enzymatic activity and CD74 activation in D-dopachrome tautomerase.
J.Biol.Chem., 297, 2021
3WQE
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D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23 complexed with D-allothreonine
分子名称: D-allothreonine, D-threo-3-hydroxyaspartate dehydratase, MAGNESIUM ION, ...
著者Yasutake, Y, Matsumoto, Y, Wada, M.
登録日2014-01-25
公開日2015-01-28
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural insights into the substrate stereospecificity of D-threo-3-hydroxyaspartate dehydratase from Delftia sp. HT23: a useful enzyme for the synthesis of optically pure L-threo- and D-erythro-3-hydroxyaspartate
Appl.Microbiol.Biotechnol., 99, 2015
3VNJ
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Crystal structures of D-Psicose 3-epimerase with D-psicose from Clostridium cellulolyticum H10
分子名称: D-psicose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
著者Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
登録日2012-01-16
公開日2012-08-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
3VNL
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Crystal structures of D-Psicose 3-epimerase with D-tagatose from Clostridium cellulolyticum H10
分子名称: D-tagatose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
著者Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
登録日2012-01-16
公開日2012-08-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
3VNK
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Crystal structures of D-Psicose 3-epimerase with D-fructose from Clostridium cellulolyticum H10
分子名称: D-fructose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
著者Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
登録日2012-01-16
公開日2012-08-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
3VNM
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Crystal structures of D-Psicose 3-epimerase with D-sorbose from Clostridium cellulolyticum H10
分子名称: D-sorbose, MANGANESE (II) ION, Xylose isomerase domain protein TIM barrel
著者Chan, H.C, Zhu, Y, Hu, Y, Ko, T.P, Huang, C.H, Ren, F, Chen, C.C, Guo, R.T, Sun, Y.
登録日2012-01-17
公開日2012-08-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars.
Protein Cell, 3, 2012
1HDQ
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Crystal structure of bovine pancreatic carboxypeptidase A complexed with D-N-hydroxyaminocarbonyl phenylalanine at 2.3 A
分子名称: CARBOXYPEPTIDASE A, D-[(N-HYDROXYAMINO)CARBONYL]PHENYLALANINE, ZINC ION
著者Cho, J.H, Ha, N.-C, Chung, S.J, Kim, D.H, Choi, K.Y, Oh, B.-H.
登録日2000-11-17
公開日2001-11-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Insight Into the Stereochemistry in the Inhibition of Carboxypeptidase a with N-(Hydroxyaminocarbonyl)Phenylalanine: Binding Modes of an Enantiomeric Pair of the Inhibitor to Carboxypeptidase A
Bioorg.Med.Chem., 10, 2002
2W2K
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BU of 2w2k by Molmil
Crystal structure of the apo forms of Rhodotorula graminis D- mandelate dehydrogenase at 1.8A.
分子名称: D-MANDELATE DEHYDROGENASE
著者Vachieri, S.G, Cole, A.R, Bagneris, C, Baker, D.P, Fewson, C.A, Basak, A.K.
登録日2008-11-02
公開日2009-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal Structure of the Apo and Holo Forms of Rhodotorula Graminis D(-)-Mandelate Dehydrogenase
To be Published
4BC5
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Crystal structure of human D-xylulokinase in complex with inhibitor 5- deoxy-5-fluoro-D-xylulose
分子名称: 1,2-ETHANEDIOL, 5-deoxy-5-fluoro-D-xylulose, XYLULOSE KINASE
著者Bunker, R.D, Loomes, K.M, Baker, E.N.
登録日2012-10-01
公開日2012-11-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism
J.Biol.Chem., 288, 2013
4BC4
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Crystal structure of human D-xylulokinase in complex with D-xylulose
分子名称: 1,2-ETHANEDIOL, D-XYLULOSE, XYLULOSE KINASE
著者Bunker, R.D, Loomes, K.M, Baker, E.N.
登録日2012-10-01
公開日2012-11-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism
J.Biol.Chem., 288, 2013
4BC2
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Crystal structure of human D-xylulokinase in complex with D-xylulose and adenosine diphosphate
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, D-XYLULOSE, ...
著者Bunker, R.D, Loomes, K.M, Baker, E.N.
登録日2012-10-01
公開日2012-11-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism
J.Biol.Chem., 288, 2013
6JQ8
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BU of 6jq8 by Molmil
Crystal structure of HddC from Yersinia pseudotuberculosis complexed with GMP-PN
分子名称: AMINOPHOSPHONIC ACID-GUANYLATE ESTER, CITRIC ACID, MAGNESIUM ION, ...
著者Shin, D.H, Kim, M.S.
登録日2019-03-29
公開日2020-04-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.546 Å)
主引用文献GTP Preference of d-Glycero-alpha-d- manno -Heptose-1-Phosphate Guanylyltransferase from Yersinia pseudotuberculosis .
Int J Mol Sci, 21, 2019
3MBO
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BU of 3mbo by Molmil
Crystal Structure of the Glycosyltransferase BaBshA bound with UDP and L-malate
分子名称: D-MALATE, GLYCEROL, Glycosyltransferase, ...
著者Wallace, B.D, Claiborne, A, Redinbo, M.R.
登録日2010-03-25
公開日2010-09-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.307 Å)
主引用文献Characterization of the N-Acetyl-alpha-d-glucosaminyl l-Malate Synthase and Deacetylase Functions for Bacillithiol Biosynthesis in Bacillus anthracis
Biochemistry, 49, 2010
3H41
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CRYSTAL STRUCTURE OF A NLPC/P60 FAMILY PROTEIN (BCE_2878) FROM BACILLUS CEREUS ATCC 10987 AT 1.79 A RESOLUTION
分子名称: ALANINE, D-GLUTAMIC ACID, NLP/P60 family protein, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-04-17
公開日2009-05-05
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structure of the gamma-D-glutamyl-L-diamino acid endopeptidase YkfC from Bacillus cereus in complex with L-Ala-[gamma]-D-Glu: insights into substrate recognition by NlpC/P60 cysteine peptidases
Acta Crystallogr.,Sect.F, 66, 2010
3VDQ
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Crystal structure of alcaligenes faecalis D-3-hydroxybutyrate dehydrogenase in complex with NAD(+) and acetate
分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Hoque, M.M, Shimizu, S, Hossain, M.T, Yamamoto, T, Suzuki, K, Takenaka, A.
登録日2012-01-06
公開日2012-02-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The structures of Alcaligenes faecalis D-3-hydroxybutyrate dehydrogenase before and after NAD+ and acetate binding suggest a dynamical reaction mechanism as a member of the SDR family.
Acta Crystallogr.,Sect.D, 64, 2008
4LFM
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BU of 4lfm by Molmil
Crystal Structure of D-galactose-6-phosphate isomerase in complex with D-psicose
分子名称: D-psicose, Galactose-6-phosphate isomerase subunit A, Galactose-6-phosphate isomerase subunit B
著者Jung, W.S, Pan, C.H.
登録日2013-06-27
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure and substrate specificity of D-galactose-6-phosphate isomerase complexed with substrates.
Plos One, 8, 2013
4LFN
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Crystal Structure of D-galactose-6-phosphate isomerase in complex with D-ribulose
分子名称: D-ribulose, Galactose-6-phosphate isomerase subunit A, Galactose-6-phosphate isomerase subunit B
著者Jung, W.S, Pan, C.H.
登録日2013-06-27
公開日2013-11-27
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure and substrate specificity of D-galactose-6-phosphate isomerase complexed with substrates.
Plos One, 8, 2013
3AWO
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Crystal structure of D-serine dehydratase in complex with D-serine from chicken kidney (EDTA-treated)
分子名称: D-SERINE, D-serine dehydratase, PYRIDOXAL-5'-PHOSPHATE
著者Tanaka, H, Senda, M, Venugopalan, N, Yamamoto, A, Senda, T, Ishida, T, Horiike, K.
登録日2011-03-25
公開日2011-06-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of a zinc-dependent D-serine dehydratase from chicken kidney.
J.Biol.Chem., 286, 2011
1GKP
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D-Hydantoinase (Dihydropyrimidinase) from Thermus sp. in space group C2221
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HYDANTOINASE, SULFATE ION, ...
著者Abendroth, J, Niefind, K, Schomburg, D.
登録日2001-08-20
公開日2002-06-27
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.295 Å)
主引用文献X-Ray Structure of a Dihydropyrimidinase from Thermus Sp. At 1.3 A Resolution
J.Mol.Biol., 320, 2002

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