PDB: 1147 件ウェブページステータス検索Chemie searchBIRD

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1TGH	TATA BINDING PROTEIN (TBP)/DNA COMPLEX 分子名称: DNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*TP*AP*CP*G)-3'), PROTEIN (TATA BINDING PROTEIN (TBP)) 著者 Juo, Z.S, Dickerson, R.E. 登録日 1996-02-13 公開日 1996-08-01 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 How proteins recognize the TATA box. J.Mol.Biol., 261, 1996
1NVP	HUMAN TFIIA/TBP/DNA COMPLEX 分子名称: 5'-D(*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*CP*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*GP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*G)-3', TATA box binding protein, ... 著者 Bleichenbacher, M, Tan, S, Richmond, T.J. 登録日 2003-02-04 公開日 2003-10-21 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes. J.Mol.Biol., 332, 2003
8HKA	TPA bound-form of Periplasmic terephthalate binding protein (TBP) from Ideonella sakaiensis 分子名称: Periplasmic terephthalate binding protein (TBP), terephthalic acid 著者 Lee, S.H, Seo, H, Kim, K.-J. 登録日 2022-11-25 公開日 2023-06-21 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.02 Å) 主引用文献 Molecular mechanism underlying high-affinity terephthalate binding and conformational change of TBP from Ideonella sakaiensis. Int.J.Biol.Macromol., 243, 2023
8HKB	TPA bound-form of Periplasmic terephthalate binding protein (TBP) from Ideonella sakaiensis mutant K184D 分子名称: Periplasmic terephthalate binding protein (TBP), terephthalic acid 著者 Lee, S.H, Seo, H, Kim, K.-J. 登録日 2022-11-25 公開日 2023-06-21 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Molecular mechanism underlying high-affinity terephthalate binding and conformational change of TBP from Ideonella sakaiensis. Int.J.Biol.Macromol., 243, 2023
8HK9	Apo-form of Periplasmic terephthalate binding protein (TBP) from Ideonella sakaiensis 分子名称: GLYCEROL, Periplasmic terephthalate binding protein (TBP) 著者 Lee, S.H, Seo, H, Kim, K.-J. 登録日 2022-11-25 公開日 2023-06-21 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular mechanism underlying high-affinity terephthalate binding and conformational change of TBP from Ideonella sakaiensis. Int.J.Biol.Macromol., 243, 2023
6E16	Ternary structure of c-Myc-TBP-TAF1 分子名称: Transcription initiation factor TFIID subunit 1,Myc proto-oncogene protein,TATA-box-binding protein 著者 Wei, Y, Dong, A, Sunnerhagen, M, Penn, L, Tong, Y, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC) 登録日 2018-07-09 公開日 2019-10-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Multiple direct interactions of TBP with the MYC oncoprotein. Nat.Struct.Mol.Biol., 26, 2019
6E24	Ternary structure of c-Myc-TBP-TAF1 分子名称: Transcription initiation factor TFIID subunit 1,Myc proto-oncogene protein,TATA-box-binding protein 著者 Wei, Y, Dong, A, Sunnerhagen, M, Penn, L, Tong, Y, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC) 登録日 2018-07-10 公開日 2019-10-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.001 Å) 主引用文献 Multiple direct interactions of TBP with the MYC oncoprotein. Nat.Struct.Mol.Biol., 26, 2019
1VOK	ARABIDOPSIS THALIANA TBP (DIMER) 分子名称: SULFATE ION, TATA-BOX-BINDING PROTEIN 著者 Nikolov, D.B, Burley, S.K. 登録日 1996-04-29 公開日 1996-11-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 2.1 A resolution refined structure of a TATA box-binding protein (TBP). Nat.Struct.Biol., 1, 1994
1VTL	CO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT 分子名称: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA BINDING PROTEIN (TBP) 著者 Kim, J.L, Nikolov, D.B, Burley, S.K. 登録日 1993-12-17 公開日 2011-07-13 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Co-Crystal Structure of TBP Recognizing the Minor Groove of a TATA Element Nature, 365, 1993
7OHB	TBP-nucleosome complex 分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ... 著者 Wang, H, Cramer, P. 登録日 2021-05-10 公開日 2021-07-28 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures and implications of TBP-nucleosome complexes. Proc.Natl.Acad.Sci.USA, 118, 2021
2ROH	The DNA binding domain of RTBP1 分子名称: Telomere binding protein-1 著者 Lee, W, Ko, S. 登録日 2008-03-22 公開日 2009-03-24 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution structure of the DNA binding domain of rice telomere binding protein RTBP1 Biochemistry, 48, 2009
8ARI	Cryo-EM structure of human CtBP1/RAI2(303-362) delta(331-341) filament 分子名称: C-terminal-binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Retinoic acid-induced protein 2 著者 Mullapudi, E, Goradia, N, Wilmanns, M. 登録日 2022-08-16 公開日 2023-08-23 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM structure of human CtBP1/RAI2(303-362) delta(331-341) filament To Be Published
8ATI	Human CtBP2(31-364) in complex with RAI2 peptide(315-322) 分子名称: DI(HYDROXYETHYL)ETHER, Isoform 2 of C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Mullapudi, E, Goradia, N, Wilmanns, M. 登録日 2022-08-23 公開日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Human CtBP2(31-364) in complex with RAI2 peptide(315-322) To Be Published
2OME	Crystal structure of human CTBP2 dehydrogenase complexed with NAD(H) 分子名称: C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Pilka, E.S, Guo, K, Rojkova, A, Debreczeni, J.E, Kavanagh, K.L, von Delft, F, Arrowsmith, C.H, Weigelt, J, Edwards, A, Sundstrom, M, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2007-01-22 公開日 2007-02-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of human CTBP2 dehydrogenase complexed with NAD(H) To be Published
7OH9	Nucleosome with TBP and TFIIA bound at SHL -6 分子名称: DNA (145-MER), Histone H2A, Histone H2B 1.1, ... 著者 Wang, H, Cramer, P. 登録日 2021-05-09 公開日 2021-07-28 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structures and implications of TBP-nucleosome complexes. Proc.Natl.Acad.Sci.USA, 118, 2021
7OHA	nucleosome with TBP and TFIIA bound at SHL +2 分子名称: DNA (122-MER), Histone H2A, Histone H2B 1.1, ... 著者 Wang, H, Cramer, P. 登録日 2021-05-09 公開日 2021-07-28 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures and implications of TBP-nucleosome complexes. Proc.Natl.Acad.Sci.USA, 118, 2021
6MZL	Human TFIID canonical state 分子名称: TATA-box-binding protein, Transcription initiation factor TFIID subunit 1, Transcription initiation factor TFIID subunit 10, ... 著者 Patel, A.B, Louder, R.K, Greber, B.J, Grunberg, S, Luo, J, Fang, J, Liu, Y, Ranish, J, Hahn, S, Nogales, E. 登録日 2018-11-05 公開日 2018-11-28 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (23 Å) 主引用文献 Structure of human TFIID and mechanism of TBP loading onto promoter DNA. Science, 362, 2018
7ZKE	Mot1:TBP:DNA - pre-hydrolysis state 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (36-MER), ... 著者 Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P. 登録日 2022-04-12 公開日 2023-04-26 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1. Nat.Struct.Mol.Biol., 30, 2023
6MZM	Human TFIID bound to promoter DNA and TFIIA 分子名称: SCP DNA (80-MER), TATA-box-binding protein, Transcription initiation factor IIA subunit 1, ... 著者 Patel, A.B, Louder, R.K, Greber, B.J, Grunberg, S, Luo, J, Fang, J, Liu, Y, Ranish, J, Hahn, S, Nogales, E. 登録日 2018-11-05 公開日 2018-11-28 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (7.5 Å) 主引用文献 Structure of human TFIID and mechanism of TBP loading onto promoter DNA. Science, 362, 2018
6MZD	Human TFIID Lobe A canonical 分子名称: TATA-box-binding protein, Transcription initiation factor TFIID subunit 1, Transcription initiation factor TFIID subunit 10, ... 著者 Patel, A.B, Louder, R.K, Greber, B.J, Grunberg, S, Luo, J, Fang, J, Liu, Y, Ranish, J, Hahn, S, Nogales, E. 登録日 2018-11-05 公開日 2018-11-28 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (9.8 Å) 主引用文献 Structure of human TFIID and mechanism of TBP loading onto promoter DNA. Science, 362, 2018
3OC3	Crystal structure of the Mot1 N-terminal domain in complex with TBP 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HELICASE MOT1, TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1) 著者 Wollmann, P, Cui, S, Viswanathan, R, Berninghausen, O, Wells, M.N, Moldt, M, Witte, G, Butryn, A, Wendler, P, Beckmann, R, Auble, D.T, Hopfner, K.-P. 登録日 2010-08-09 公開日 2011-07-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP. Nature, 475, 2011
1C9B	CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP) 分子名称: ADMLP TATA-BOX DNA CONTAINING IIB RECOGNITION ELEMENT, GENERAL TRANSCRIPTION FACTOR IIB, TATA BOX BINDING PROTEIN 著者 Tsai, F.T.F, Sigler, P.B. 登録日 1999-08-01 公開日 2000-01-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structural basis of preinitiation complex assembly on human pol II promoters. EMBO J., 19, 2000
4WZS	Crystal structure of the Mot1 N-terminal domain in complex with TBP and NC2 bound to a promoter DNA fragment 分子名称: DNA (5'-D(P*CP*CP*AP*CP*CP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*CP*CP*T)-3'), DNA (5'-D(P*GP*GP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*GP*GP*TP*GP*G)-3'), ECU04_1440 protein, ... 著者 Butryn, A, Hopfner, K.-P. 登録日 2014-11-20 公開日 2015-08-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.78 Å) 主引用文献 Structural basis for recognition and remodeling of the TBP:DNA:NC2 complex by Mot1. Elife, 4, 2015
3OCI	Crystal structure of TBP (TATA box binding protein) 分子名称: 1,2-ETHANEDIOL, TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1) 著者 Cui, S, Wollmann, P, Moldt, M, Hopfner, K.-P. 登録日 2010-08-10 公開日 2011-07-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP. Nature, 475, 2011
1D3U	TATA-BINDING PROTEIN/TRANSCRIPTION FACTOR (II)B/BRE+TATA-BOX COMPLEX FROM PYROCOCCUS WOESEI 分子名称: DNA 23-MER: BRE+TATA-BOX, DNA 24-MER: BRE+TATA-BOX, TATA-BINDING PROTEIN, ... 著者 Littlefield, O, Korkhin, Y, Sigler, P.B. 登録日 1999-10-01 公開日 1999-11-15 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The structural basis for the oriented assembly of a TBP/TFB/promoter complex. Proc.Natl.Acad.Sci.USA, 96, 1999

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