PDB: 95574 件ウェブページステータス検索Chemie searchBIRD

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8I65	Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with isoorotic acid (2,4-Dihydroxypyrimidine-5-carboxylic Acid), Form I 分子名称: 1,2-ETHANEDIOL, 2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylic acid, Uracil-DNA glycosylase 著者 Raj, P, Paul, A, Gopal, B. 登録日 2023-01-27 公開日 2023-07-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment. Eur.J.Med.Chem., 258, 2023
8I6D	Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 5-Hydroxy-2,4(1H,3H)-pyrimidinedione, Form VI 分子名称: 1,2-ETHANEDIOL, 5-oxidanyl-1~{H}-pyrimidine-2,4-dione, DI(HYDROXYETHYL)ETHER, ... 著者 Raj, P, Paul, A, Gopal, B. 登録日 2023-01-27 公開日 2023-07-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment. Eur.J.Med.Chem., 258, 2023
8I6A	Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with Orotic acid, Form III 分子名称: 1,2-ETHANEDIOL, OROTIC ACID, Uracil-DNA glycosylase 著者 Raj, P, Paul, A, Gopal, B. 登録日 2023-01-27 公開日 2023-07-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment. Eur.J.Med.Chem., 258, 2023
8I6C	Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 6-Formyl-uracil, Form III 分子名称: 6-[bis(oxidanyl)methyl]-5~{H}-pyrimidine-2,4-dione, Uracil-DNA glycosylase 著者 Raj, P, Paul, A, Gopal, B. 登録日 2023-01-27 公開日 2023-07-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment. Eur.J.Med.Chem., 258, 2023
8I64	Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with Barbituric acid, Form II 分子名称: 1,2-ETHANEDIOL, BARBITURIC ACID, Uracil-DNA glycosylase 著者 Raj, P, Paul, A, Gopal, B. 登録日 2023-01-27 公開日 2023-07-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment. Eur.J.Med.Chem., 258, 2023
8I68	Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with Uric acid, Form III 分子名称: 1,2-ETHANEDIOL, URIC ACID, Uracil-DNA glycosylase 著者 Raj, P, Paul, A, Gopal, B. 登録日 2023-01-27 公開日 2023-07-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment. Eur.J.Med.Chem., 258, 2023
5XQN	Crystal structure of Notched-fin eelpout type III antifreeze protein (NFE6, AFP), C2221 form. 分子名称: Ice-structuring protein, SULFATE ION 著者 Adachi, M, Kondo, H, Tsuda, S. 登録日 2017-06-07 公開日 2018-05-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5XQR	Crystal structure of Notched-fin eelpout type III antifreeze protein A20V mutant (NFE6, AFP), C2221 form 分子名称: ACETATE ION, Ice-structuring protein 著者 Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S. 登録日 2017-06-07 公開日 2018-05-16 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7OOK	Bacteriophage PRD1 Major Capsid Protein P3 in complex with CPZ 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, CHLORIDE ION, ... 著者 Duyvesteyn, H.M.E, Peccati, F, Martinez-Castillo, A, Jimenez-Oses, G, Oksanen, H.M, Stuart, D.I, Abrescia, N.G.A. 登録日 2021-05-27 公開日 2022-06-08 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Bacteriophage PRD1 as a nanoscaffold for drug loading Nanoscale, 13, 2021
5XQV	Crystal structure of Notched-fin eelpout type III antifreeze protein A20L mutant (NFE6, AFP), P21 form 分子名称: Ice-structuring protein 著者 Adachi, M, Shimizu, R, Shibazaki, C, Kondo, H, Tsuda, S. 登録日 2017-06-07 公開日 2018-05-16 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (0.97 Å) 主引用文献 Polypentagonal ice-like water networks emerge solely in an activity-improved variant of ice-binding protein Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7PZM	HBc-P5T in complex with X-100 分子名称: Capsid protein, FRAGMENT OF TRITON X-100 著者 Makbul, C, Boettcher, B. 登録日 2021-10-12 公開日 2021-12-08 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Binding of a Pocket Factor to Hepatitis B Virus Capsids Changes the Rotamer Conformation of Phenylalanine 97. Viruses, 13, 2021
7PDE	Structure of Adenylyl cyclase 9 in complex with Gs protein alpha subunit and MANT-GTP 分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Adenylate cyclase 9, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ... 著者 Qi, C, Korkhov, V.M. 登録日 2021-08-05 公開日 2022-01-19 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Structural basis of adenylyl cyclase 9 activation. Nat Commun, 13, 2022
7PDF	focus refinement of soluble domain of adenylyl cyclase 9 in complex with Gs protein alpha subunit and MANT-GTP 分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, Adenylate cyclase 9, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ... 著者 Qi, C, Korkhov, V.M. 登録日 2021-08-05 公開日 2022-01-26 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of adenylyl cyclase 9 activation. Nat Commun, 13, 2022
6Y8F	An inactive (D136N and D137N) variant of alpha-1,6-mannanase, GH76A of Salegentibacter sp. HEL1_6 in complex with alpha-1,6-mannotriose 分子名称: Alpha-1,6-endo-mannanase GH76A mutant, CALCIUM ION, alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose 著者 Hehemann, J.H, Solanki, V.A. 登録日 2020-03-04 公開日 2021-03-31 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.472 Å) 主引用文献 Glycoside hydrolase from the GH76 family indicates that marine Salegentibacter sp. Hel_I_6 consumes alpha-mannan from fungi. Isme J, 2022
6ZHK	Crystal structure of adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Methanocaldococcus jannaschii DSM 2661 分子名称: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, MAGNESIUM ION 著者 Boyko, K.M, Nikolaeva, T.N, Stekhanova, T.N, Rakitina, T.V, Bezsudnova, E.Y, Popov, V.O. 登録日 2020-06-23 公開日 2020-07-01 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Three-Dimensional Structure of Thermostable D-Amino Acid Transaminase from the Archaeon Methanocaldococcus jannaschii DSM 2661 Crystallography Reports, 2021
8SKR	human liver mitochondrial Aspartate aminotransferase 分子名称: Aspartate aminotransferase, mitochondrial, PYRIDOXAL-5'-PHOSPHATE 著者 Zhang, Z, Tringides, M. 登録日 2023-04-20 公開日 2024-02-21 実験手法 ELECTRON MICROSCOPY (2.99 Å) 主引用文献 High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology. Mol.Cell Proteomics, 22, 2023
7SJC	Crystal structure of dehaloperoxidase B in complex with gamma-terpinene 分子名称: 1-methyl-4-(propan-2-yl)cyclohexa-1,4-diene, Dehaloperoxidase B, GLYCEROL, ... 著者 Malewschik, T, Yun, D, de Serrano, V.S, Ghiladi, R.A. 登録日 2021-10-17 公開日 2022-11-23 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes To Be Published
7S3V	Structure of HsKYNase_66, an evolved variant of human kynureninase with greatly increased activity towards kynurenine 分子名称: Kynureninase 著者 Burkholder, N.T, Zhang, Y.J. 登録日 2021-09-08 公開日 2022-12-21 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.249 Å) 主引用文献 Bypassing evolutionary dead ends and switching the rate-limiting step of a human immunotherapeutic enzyme. Nat Catal, 5, 2022
6PC3	Crystal structure of Helicobacter pylori PPX/GppA in complex with GSP 分子名称: 1,2-ETHANEDIOL, 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, CHLORIDE ION, ... 著者 Song, H, Wang, C, Shaw, G.X, Ji, X. 登録日 2019-06-15 公開日 2019-11-20 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure and activity of PPX/GppA homologs from Escherichia coli and Helicobacter pylori. Febs J., 287, 2020
3LYF	Crystal Structure of the Rift Valley Fever Virus Nucleocapsid Protein 分子名称: GLYCEROL, Nucleocapsid protein 著者 Raymond, D.D, Smith, J.L. 登録日 2010-02-26 公開日 2010-06-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Structure of the Rift Valley fever virus nucleocapsid protein reveals another architecture for RNA encapsidation. Proc.Natl.Acad.Sci.USA, 107, 2010
3M8D	Crystal structure of spin-labeled BtuB V10R1 with bound calcium and cyanocobalamin 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, CYANOCOBALAMIN, ... 著者 Freed, D.M, Horanyi, P.S, Wiener, M.C, Cafiso, D.S. 登録日 2010-03-17 公開日 2010-09-15 最終更新日 2021-08-18 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Conformational exchange in a membrane transport protein is altered in protein crystals. Biophys.J., 99, 2010
7SMP	CryoEM structure of NKCC1 Bu-I 分子名称: 3-(butylamino)-4-phenoxy-5-sulfamoylbenzoic acid, POTASSIUM ION, Solute carrier family 12 member 2 著者 Moseng, M.A. 登録日 2021-10-26 公開日 2022-09-28 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Inhibition mechanism of NKCC1 involves the carboxyl terminus and long-range conformational coupling. Sci Adv, 8, 2022
7T13	Hexameric HIV-1 (M-group) CA Q50Y mutant 分子名称: Capsid protein p24 著者 Jacques, D.A, James, L.C. 登録日 2021-12-01 公開日 2022-10-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Evasion of cGAS and TRIM5 defines pandemic HIV. Nat Microbiol, 7, 2022
7T12	Hexameric HIV-1 (O-group) CA 分子名称: Capsid protein p24 著者 Jacques, D.A, James, L.C. 登録日 2021-12-01 公開日 2022-10-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Evasion of cGAS and TRIM5 defines pandemic HIV. Nat Microbiol, 7, 2022
7T15	Hexameric SIVcpz CA 分子名称: Capsid protein p24 著者 Jacques, D.A, Dickson, C.F, James, L.C. 登録日 2021-12-01 公開日 2022-10-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Evasion of cGAS and TRIM5 defines pandemic HIV. Nat Microbiol, 7, 2022

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