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6YP3
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14-3-3 sigma with RelA/p65 binding site pS45 and covalently bound TCF521-028
分子名称: 1-(4-methylphenyl)-1,2,4-triazole, 14-3-3 protein sigma, CHLORIDE ION, ...
著者Wolter, M, Ottmann, C.
登録日2020-04-15
公開日2020-09-23
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fragment-Based Stabilizers of Protein-Protein Interactions through Imine-Based Tethering.
Angew.Chem.Int.Ed.Engl., 59, 2020
8FKQ
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Human nucleolar pre-60S ribosomal subunit (State A2)
分子名称: 28S rRNA, 5.8S rRNA, 60S ribosomal protein L13, ...
著者Vanden Broeck, A, Klinge, S.
登録日2022-12-21
公開日2023-07-12
最終更新日2023-07-19
実験手法ELECTRON MICROSCOPY (2.76 Å)
主引用文献Principles of human pre-60 S biogenesis.
Science, 381, 2023
6YPD
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Crystal structure of AmpC from E. coli with Cyclic Boronate 3 (CB3 / APC308)
分子名称: (3~{S})-2,2-bis(oxidanyl)-3-(phenylmethylsulfanyl)-3,4-dihydro-1,2-benzoxaborinin-2-ium-8-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase, ...
著者Lang, P.A, Brem, J, Schofield, C.J.
登録日2020-04-15
公開日2020-06-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Bicyclic Boronates as Potent Inhibitors of AmpC, the Class C beta-Lactamase from Escherichia coli .
Biomolecules, 10, 2020
8AHE
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PAC-FragmentDEL: Photoactivated covalent capture of DNA encoded fragments for hit discovery
分子名称: SULFATE ION, UDP-N-acetylglucosamine 2-epimerase, ~{N},5-dimethyl-1-phenyl-pyrazole-4-sulfonamide
著者Baker, L.M, Murray, J.B, Hubbard, R.E.
登録日2022-07-21
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.108 Å)
主引用文献PAC-FragmentDEL - photoactivated covalent capture of DNA-encoded fragments for hit discovery.
Rsc Med Chem, 13, 2022
8AHF
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PAC-FragmentDEL: Photoactivated covalent capture of DNA encoded fragments for hit discovery
分子名称: (2~{R},4~{S})-4-[bis(fluoranyl)methoxy]-~{N}-methyl-1-(2~{H}-pyrazolo[4,3-b]pyridin-6-ylcarbonyl)pyrrolidine-2-carboxamide, SULFATE ION, UDP-N-acetylglucosamine 2-epimerase
著者Baker, L.M, Murray, J.B, Hubbard, R.E.
登録日2022-07-21
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.271 Å)
主引用文献PAC-FragmentDEL - photoactivated covalent capture of DNA-encoded fragments for hit discovery.
Rsc Med Chem, 13, 2022
9B3G
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BU of 9b3g by Molmil
Human Notch-1 EGFs 21-23
分子名称: BARIUM ION, Neurogenic locus notch homolog protein 1
著者Johnson, S, Sheppard, D, Handford, P.A, Lea, S.M.
登録日2024-03-19
公開日2024-10-16
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural and functional studies of the EGF20-27 region reveal new features of the human Notch receptor important for optimal activation.
Structure, 32, 2024
5EP7
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BU of 5ep7 by Molmil
Crystal structure of the bromodomain of human CREBBP in complex with UN32
分子名称: 3-[(1-methyl-6-oxidanylidene-pyridin-3-yl)carbonylamino]benzoic acid, CREB-binding protein
著者Dong, J, Caflisch, A.
登録日2015-11-11
公開日2016-11-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.198 Å)
主引用文献Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules.
ACS Med Chem Lett, 9, 2018
8IP8
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Wheat 80S ribosome stalled on AUG-Stop boron dependently
分子名称: 18S ribosomal RNA, 40S ribosomal protein eL8, 40S ribosomal protein eS1, ...
著者Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T.
登録日2023-03-14
公開日2024-02-21
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Nat.Chem.Biol., 20, 2024
9RJ0
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BU of 9rj0 by Molmil
SARS-CoV-2 with a bound inhibitor
分子名称: 1-(benzimidazol-1-yl)-3-[(4~{S})-6-fluoranyl-3,4-dihydro-2~{H}-thiochromen-4-yl]urea, 3C-like proteinase nsp5, SODIUM ION
著者Mac Sweeney, A.
登録日2025-06-12
公開日2025-07-09
実験手法X-RAY DIFFRACTION (1.709 Å)
主引用文献SARS-CoV-2 with a bound inhibitor
To Be Published
8Q3D
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BU of 8q3d by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKPR(NH2) inhibitor peptide
分子名称: CHLORIDE ION, COENZYME A, GLYCEROL, ...
著者Dian, C, Giglione, C, Meinnel, T.
登録日2023-08-04
公開日2024-08-14
最終更新日2025-02-26
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Novel, tightly structurally related N-myristoyltransferase inhibitors display equally potent yet distinct inhibitory mechanisms.
Structure, 32, 2024
6X21
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BU of 6x21 by Molmil
Crystal structure of PT1673 bound to HIF2a-B*:ARNT-B* complex
分子名称: 1-(3-bromo-5-fluorophenoxy)-4-[(difluoromethyl)sulfonyl]-2-nitrobenzene, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1
著者Du, X.
登録日2020-05-19
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Crystal structure of PT1673 bound to HIF2a-B*:ARNT-B* complex
To Be Published
6QVA
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BU of 6qva by Molmil
Crystal structure of a CHAD domain from Chlorobium tepidum in complex with inorganic polyphosphate
分子名称: 1,2-ETHANEDIOL, CHAD domain, PHOSPHATE ION, ...
著者Lorenzo-Orts, L, Hothorn, M.
登録日2019-03-01
公開日2019-05-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Molecular characterization of CHAD domains as inorganic polyphosphate-binding modules.
Life Sci Alliance, 2, 2019
9RM6
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BU of 9rm6 by Molmil
Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0027808
分子名称: 6-chloranyl-~{N}-(2,3-dihydro-1~{H}-isoindol-5-yl)-1~{H}-indazole-4-carboxamide, DIMETHYL SULFOXIDE, SULFATE ION, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Fearon, D, von Delft, F.
登録日2025-06-17
公開日2025-07-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0027808
To Be Published
7V1I
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BU of 7v1i by Molmil
Crystal structure of Omsk hemorrhagic fever virus NS5 MTase (with an m7GMP-Arg28 adduct and in complex with SAH)
分子名称: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Core protein, GLYCEROL, ...
著者Jia, H, Gong, P.
登録日2021-08-04
公開日2022-06-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal Structures of Flavivirus NS5 Guanylyltransferase Reveal a GMP-Arginine Adduct.
J.Virol., 96, 2022
8OWJ
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BU of 8owj by Molmil
Lipidic amyloid-beta(1-40) fibril - polymorph L2-L2
分子名称: Amyloid-beta A4 protein
著者Frieg, B, Han, M, Giller, K, Dienemann, C, Riedel, D, Becker, S, Andreas, L.B, Griesinger, C, Schroeder, G.F.
登録日2023-04-28
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Cryo-EM structures of lipidic fibrils of amyloid-beta (1-40).
Nat Commun, 15, 2024
7RLV
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BU of 7rlv by Molmil
Antibody 2F2 in complex with P. vivax CSP peptide GDRADGQPAGDRADGQPA
分子名称: 1,2-ETHANEDIOL, 2F2 Fab heavy chain, 2F2 Fab light chain, ...
著者Kucharska, I, Julien, J.P.
登録日2021-07-26
公開日2022-01-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of Plasmodium vivax inhibition by antibodies binding to the circumsporozoite protein repeats.
Elife, 11, 2022
8Q3S
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BU of 8q3s by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKAR inhibitor peptide
分子名称: CHLORIDE ION, COENZYME A, GLY-ASN-CYS-PHE-SER-LYS-ALA-ARG, ...
著者Dian, C, Giglione, C, Meinnel, T.
登録日2023-08-04
公開日2024-08-14
最終更新日2025-02-26
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Novel, tightly structurally related N-myristoyltransferase inhibitors display equally potent yet distinct inhibitory mechanisms.
Structure, 32, 2024
8Q3T
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BU of 8q3t by Molmil
HsNMT1 in complex with both MyrCoA and GNCFSKPRVPTK inhibitor peptide
分子名称: CHLORIDE ION, COENZYME A, GLYCEROL, ...
著者Dian, C, Giglione, C, Meinnel, T.
登録日2023-08-04
公開日2024-08-14
最終更新日2025-02-26
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Novel, tightly structurally related N-myristoyltransferase inhibitors display equally potent yet distinct inhibitory mechanisms.
Structure, 32, 2024
8Q2Z
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BU of 8q2z by Molmil
HsNMT1 in complex with both MyrCoA and GNLLSKFR peptide
分子名称: CHLORIDE ION, COENZYME A, GLYCEROL, ...
著者Dian, C, Giglione, C, Meinnel, T.
登録日2023-08-03
公開日2024-08-14
最終更新日2025-02-26
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Novel, tightly structurally related N-myristoyltransferase inhibitors display equally potent yet distinct inhibitory mechanisms.
Structure, 32, 2024
7UGI
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BU of 7ugi by Molmil
Bromodomain of EP300 liganded with BMS-536924
分子名称: (3M)-4-{[(2S)-2-(3-chlorophenyl)-2-hydroxyethyl]amino}-3-[4-methyl-6-(morpholin-4-yl)-1H-benzimidazol-2-yl]pyridin-2(1H)-one, 1,2-ETHANEDIOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ...
著者Schonbrunn, E, Bikowitz, M.
登録日2022-03-24
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of CBP and EP300 interaction with kinase inhibitors
To Be Published
8E77
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BU of 8e77 by Molmil
rystal structure of Pcryo_0616, the aminotransferase required to synthesize UDP-N-acetyl-3-amino-D-glucosaminuronic acid (UDP-GlcNAc3NA), incomplete with its external aldimine reaction intermediate
分子名称: (2S,3S,4R,5R,6R)-5-(acetylamino)-6-{[(R)-{[(S)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-3-hydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}tetrahydro-2H-pyran-2-carboxylic acid (non-preferred name), 1,2-ETHANEDIOL, DegT/DnrJ/EryC1/StrS aminotransferase, ...
著者Hofmeister, D.L, Seltzner, C.A, Bockhaus, N.J, Thoden, J.B, Holden, H.M.
登録日2022-08-23
公開日2022-11-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Investigation of the enzymes required for the biosynthesis of 2,3-diacetamido-2,3-dideoxy-d-glucuronic acid in Psychrobacter cryohalolentis K5 T.
Protein Sci., 32, 2023
6R6I
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BU of 6r6i by Molmil
Crystal structure of transthyretin mutant A25T in complex with CHF5074, a flurbiprofen analogue
分子名称: 1-(3',4'-dichloro-2-fluorobiphenyl-4-yl)cyclopropanecarboxylic acid, PHOSPHATE ION, Transthyretin
著者Loconte, V, Menozzi, I, Ferrari, A, Berni, R, Zanotti, G.
登録日2019-03-27
公開日2019-09-11
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.467 Å)
主引用文献Structure-activity relationships of flurbiprofen analogues as stabilizers of the amyloidogenic protein transthyretin.
J.Struct.Biol., 208, 2019
8OVM
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BU of 8ovm by Molmil
Lipidic amyloid-beta(1-40) fibril - polymorph L2
分子名称: Amyloid-beta A4 protein
著者Frieg, B, Han, M, Giller, K, Dienemann, C, Riedel, D, Becker, S, Andreas, L.B, Griesinger, C, Schroeder, G.F.
登録日2023-04-26
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Cryo-EM structures of lipidic fibrils of amyloid-beta (1-40).
Nat Commun, 15, 2024
8OFM
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Structure of the ALDEHYDE DEHYDROGENASE 5F1 (ALDH5F1) from the moss Physcomitrium patens in complex with NAD in an extended conformation
分子名称: 1,2-ETHANEDIOL, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Morera, S, Kopecny, D, Vigouroux, A.
登録日2023-03-16
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.831 Å)
主引用文献A study on abiotic stress responses of aldehyde dehydrogenase (ALDH) superfamilies in moss and barley focused on members linked to the GABA shunt pathway
To Be Published
6IRD
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BU of 6ird by Molmil
Complex structure of INADL PDZ89 and PLCb4 C-terminal CC-PBM
分子名称: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase, GOLD ION, InaD-like protein
著者Ye, F, Li, J, Huang, Y, Liu, W, Zhang, M.
登録日2018-11-12
公開日2019-01-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.813 Å)
主引用文献An unexpected INAD PDZ tandem-mediated plc beta binding in Drosophila photo receptors.
Elife, 7, 2018

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