PDB: 95574 件ウェブページステータス検索Chemie searchBIRD

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8UAO	DpHF18 filament 分子名称: DpHF18 著者 Lynch, E.M, Shen, H, Kollman, J.M, Baker, D. 登録日 2023-09-21 公開日 2024-04-10 最終更新日 2024-08-07 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 De novo design of pH-responsive self-assembling helical protein filaments. Nat Nanotechnol, 19, 2024
8UBG	DpHF19 filament 分子名称: DpHF19,Green fluorescent protein (Fragment) 著者 Lynch, E.M, Shen, H, Kollman, J.M, Baker, D. 登録日 2023-09-22 公開日 2024-04-10 最終更新日 2024-08-07 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 De novo design of pH-responsive self-assembling helical protein filaments. Nat Nanotechnol, 19, 2024
8UHW	The structure of the Clostridium thermocellum AdhE spirosome 分子名称: Aldehyde-alcohol dehydrogenase, FE (III) ION 著者 Ziegler, S.J, Gruber, J.N. 登録日 2023-10-09 公開日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Structural characterization and dynamics of AdhE ultrastructures from Clostridium thermocellum: A containment strategy for toxic intermediates Elife, 2024
8VCT	CyoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 6:2:1 stoichiometry from E. coli Tn7 bound to ATPgS and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (50-MER), MAGNESIUM ION, ... 著者 Shen, Y, Guarne, A. 登録日 2023-12-14 公開日 2024-07-31 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Assembly of the Tn7 targeting complex by a regulated stepwise process. Mol.Cell, 84, 2024
8VCJ	CryoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 7:2:1 stoichiometry from E. coli Tn7 bound to ATPgS and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA, MAGNESIUM ION, ... 著者 Shen, Y, Guarne, A. 登録日 2023-12-14 公開日 2024-07-31 実験手法 ELECTRON MICROSCOPY (3.32 Å) 主引用文献 Assembly of the Tn7 targeting complex by a regulated stepwise process. Mol.Cell, 84, 2024
1MGV	Crystal Structure of the R391A Mutant of 7,8-Diaminopelargonic Acid Synthase 分子名称: 7,8-diamino-pelargonic acid aminotransferase, ISOPROPYL ALCOHOL, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Eliot, A.C, Sandmark, J, Schneider, G, Kirsch, J.F. 登録日 2002-08-16 公開日 2002-11-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The Dual-Specific Active Site of 7,8-Diaminopelargonic Acid Synthase and the Effect of the R391A Mutation Biochemistry, 41, 2002
1PEZ	Bacillus circulans strain 251 mutant A230V 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETIC ACID, ... 著者 Rozeboom, H.J, Dijkstra, B.W. 登録日 2003-05-23 公開日 2003-10-28 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Conversion of Cyclodextrin Glycosyltransferase into a Starch Hydrolase by Directed Evolution: The Role of Alanine 230 in Acceptor Subsite +1 Biochemistry, 42, 2003
2W5B	Human Nek2 kinase ATPgammaS-bound 分子名称: CHLORIDE ION, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Bayliss, R. 登録日 2008-12-08 公開日 2008-12-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Insights Into the Conformational Variability and Regulation of Human Nek2 Kinase. J.Mol.Biol., 386, 2009
1XYA	X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE ISOMERASE-SUBSTRATE COMPLEXES POSITION THE SUBSTRATE AND PROVIDE EVIDENCE FOR METAL MOVEMENT DURING CATALYSIS 分子名称: HYDROXIDE ION, MAGNESIUM ION, XYLOSE ISOMERASE 著者 Lavie, A, Allen, K.N, Petsko, G.A, Ringe, D. 登録日 1994-01-03 公開日 1994-05-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the substrate and provide evidence for metal movement during catalysis. Biochemistry, 33, 1994
1XYC	X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE ISOMERASE-SUBSTRATE COMPLEXES POSITION THE SUBSTRATE AND PROVIDE EVIDENCE FOR METAL MOVEMENT DURING CATALYSIS 分子名称: 3-O-METHYLFRUCTOSE IN LINEAR FORM, MAGNESIUM ION, XYLOSE ISOMERASE 著者 Lavie, A, Allen, K.N, Petsko, G.A, Ringe, D. 登録日 1994-01-03 公開日 1994-05-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the substrate and provide evidence for metal movement during catalysis. Biochemistry, 33, 1994
1XYB	X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE ISOMERASE-SUBSTRATE COMPLEXES POSITION THE SUBSTRATE AND PROVIDE EVIDENCE FOR METAL MOVEMENT DURING CATALYSIS 分子名称: D-glucose, MAGNESIUM ION, XYLOSE ISOMERASE 著者 Lavie, A, Allen, K.N, Petsko, G.A, Ringe, D. 登録日 1994-01-03 公開日 1994-05-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the substrate and provide evidence for metal movement during catalysis. Biochemistry, 33, 1994
2G2F	A Src-like Inactive Conformation in the Abl Tyrosine Kinase Domain 分子名称: ATP-Peptide Conjugate, Abl Kinase, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ... 著者 Levinson, N.M, Kuchment, O. 登録日 2006-02-15 公開日 2006-05-23 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 A SRC-like inactive conformation in the abl tyrosine kinase domain. Plos Biol., 4, 2006
152L	CONSERVATION OF SOLVENT-BINDING SITES IN 10 CRYSTAL FORMS OF T4 LYSOZYME 分子名称: SULFATE ION, T4 LYSOZYME 著者 Matsumura, M, Weaver, L.H, Matthews, B.W. 登録日 1994-01-26 公開日 1994-05-31 最終更新日 2020-07-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Conservation of solvent-binding sites in 10 crystal forms of T4 lysozyme. Protein Sci., 3, 1994
1JMF	CONTRIBUTIONS OF ORIENTATION AND HYDROGEN BONDING TO CATALYSIS IN ASN-229 MUTANTS OF THYMIDYLATE SYNTHASE 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE 著者 Finer-Moore, J, Stroud, R.M. 登録日 1997-09-13 公開日 1998-01-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Contributions of orientation and hydrogen bonding to catalysis in Asn229 mutants of thymidylate synthase. J.Mol.Biol., 276, 1998
1JMH	CONTRIBUTIONS OF ORIENTATION AND HYDROGEN BONDING TO CATALYSIS IN ASN-229 MUTANTS OF THYMIDYLATE SYNTHASE 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE 著者 Finer-Moore, J, Stroud, R.M. 登録日 1997-09-13 公開日 1998-01-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Contributions of orientation and hydrogen bonding to catalysis in Asn229 mutants of thymidylate synthase. J.Mol.Biol., 276, 1998
1JMI	CONTRIBUTIONS OF ORIENTATION AND HYDROGEN BONDING TO CATALYSIS IN ASN-229 MUTANTS OF THYMIDYLATE SYNTHASE 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE 著者 Finer-Moore, J, Stroud, R.M. 登録日 1997-09-13 公開日 1998-01-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Contributions of orientation and hydrogen bonding to catalysis in Asn229 mutants of thymidylate synthase. J.Mol.Biol., 276, 1998
1JMG	CONTRIBUTIONS OF ORIENTATION AND HYDROGEN BONDING TO CATALYSIS IN ASN-229 MUTANTS OF THYMIDYLATE SYNTHASE 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE 著者 Finer-Moore, J, Stroud, R.M. 登録日 1997-09-13 公開日 1998-01-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Contributions of orientation and hydrogen bonding to catalysis in Asn229 mutants of thymidylate synthase. J.Mol.Biol., 276, 1998
8UQE	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 26-residue linker (RING not modeled in density) 分子名称: E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E 著者 Hu, Q, Botuyan, M.V, Mer, G. 登録日 2023-10-23 公開日 2024-01-17 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.562 Å) 主引用文献 Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
8UQD	Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 20-residue linker (condition 2. RING not modeled in density) 分子名称: E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E 著者 Hu, Q, Botuyan, M.V, Mer, G. 登録日 2023-10-23 公開日 2024-01-17 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.893 Å) 主引用文献 Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell, 84, 2024
2CEP	ROLE OF MET-230 IN INTRAMOLECULAR ELECTRON TRANSFER BETWEEN THE OXYFERRYL HEME AND TRP 191 IN CYTOCHROME C PEROXIDASE COMPOUND II 分子名称: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE 著者 Han, G.W, Miller, M.A, Kraut, J. 登録日 1994-05-31 公開日 1994-08-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Role of methionine 230 in intramolecular electron transfer between the oxyferryl heme and tryptophan 191 in cytochrome c peroxidase compound II. Biochemistry, 33, 1994
1E0D	UDP-N-Acetylmuramoyl-L-Alanine:D-Glutamate Ligase 分子名称: SULFATE ION, UDP-N-ACETYLMURAMOYLALANINE--D-GLUTAMATE LIGASE 著者 Fanchon, E, Bertrand, J, Chantalat, L, Dideberg, O. 登録日 2000-03-24 公開日 2000-06-09 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 "Open" Structures of Murd: Domain Movements and Structural Similarities with Folylpolyglutamate Synthetase. J.Mol.Biol., 301, 2000
2LT9	The solution structure of Ca2+ binding domain 2B of the third isoform of the Na+/Ca2+ exchanger 分子名称: Protein Slc8a3 著者 Breukels, V, Touw, W.G, Vuister, G.W. 登録日 2012-05-15 公開日 2012-08-01 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 NMR structure note: solution structure of Ca(2+) binding domain 2B of the third isoform of the Na(+)/Ca (2+) exchanger. J.Biomol.Nmr, 54, 2012
7ASQ	Orotidine 5'-monophosphate decarboxylase-domain of human UMPS in complex with the reaction product UMP at 0.95 Angstrom resolution 分子名称: GLYCEROL, SODIUM ION, SULFATE ION, ... 著者 Rindfleisch, S, Rabe von Pappenheim, F. 登録日 2020-10-28 公開日 2021-11-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis Nat Catal, 5, 2022
7AM9	OMPD-domain of human UMPS in complex with the substrate OMP at 0.99 Angstroms resolution 分子名称: GLYCEROL, OROTIDINE-5'-MONOPHOSPHATE, SULFATE ION, ... 著者 Tittmann, K, Rindfleisch, S, Krull, M. 登録日 2020-10-08 公開日 2021-11-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (0.99 Å) 主引用文献 Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis Nat Catal, 5, 2022
7EDD	Crystal structure of a serine protease from Streptococcus pyogenes 分子名称: C5a peptidase, CALCIUM ION, CHLORIDE ION, ... 著者 Jobichen, C, Sivaraman, J. 登録日 2021-03-15 公開日 2021-05-12 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.897 Å) 主引用文献 The Autocatalytic Cleavage Domain Is Not Required for the Activity of ScpC, a Virulence Protease from Streptococcus pyogenes : A Structural Insight. Biochemistry, 60, 2021

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