PDB: 72703 件ウェブページステータス検索Chemie searchBIRD

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5MJL	Single-shot pink beam serial crystallography: Proteinase K 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ... 著者 Meents, A, Oberthuer, D, Lieske, J, Srajer, V. 登録日 2016-12-01 公開日 2017-11-15 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.21013784 Å) 主引用文献 Pink-beam serial crystallography. Nat Commun, 8, 2017
3K7V	Protein phosphatase 2A core complex bound to dinophysistoxin-1 分子名称: (2R)-3-[(2S,5R,6R,8S)-8-{(1R,2E)-3-[(2R,4a'R,5R,6'S,8'R,8a'S)-6'-{(1S,3S)-3-[(2S,3R,6R,11R)-3,11-dimethyl-1,7-dioxaspiro[5.5]undec-2-yl]-1-hydroxybutyl}-8'-hydroxy-7'-methylideneoctahydro-3H,3'H-spiro[furan-2,2'-pyrano[3,2-b]pyran]-5-yl]-1-methylprop-2-en-1-yl}-5-hydroxy-10-methyl-1,7-dioxaspiro[5.5]undec-10-en-2-yl]-2-hydroxy-2-methylpropanoic acid, MANGANESE (II) ION, SULFATE ION, ... 著者 Jeffrey, P.D, Huhn, J, Shi, Y. 登録日 2009-10-13 公開日 2009-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 A structural basis for the reduced toxicity of dinophysistoxin-2. Chem.Res.Toxicol., 22, 2009
5LDA	Structure of deubiquitinating enzyme homolog (Pyrococcus furiosus JAMM1) in complex with ubiquitin-like SAMP2. 分子名称: GLYCEROL, JAMM1, SAMP2, ... 著者 Cao, S, Engilberge, S, Girard, E, Gabel, F, Franzetti, B, Maupin-Furlow, J.A. 登録日 2016-06-24 公開日 2017-06-21 最終更新日 2022-03-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Insight into Ubiquitin-Like Protein Recognition and Oligomeric States of JAMM/MPN(+) Proteases. Structure, 25, 2017
5YWX	Crystal structure of hematopoietic prostaglandin D synthase in complex with F092 分子名称: GLUTATHIONE, GLYCEROL, Hematopoietic prostaglandin D synthase, ... 著者 Kamo, M, Furubayashi, N, Inaka, K, Aritake, K, Omura, A, Tanaka, A. 登録日 2017-11-30 公開日 2018-09-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Characterization of crystal water molecules in a high-affinity inhibitor and hematopoietic prostaglandin D synthase complex by interaction energy studies. Bioorg. Med. Chem., 26, 2018
3K7W	Protein phosphatase 2A core complex bound to dinophysistoxin-2 分子名称: (2R)-2-hydroxy-3-[(2S,5R,6R,8S)-5-hydroxy-8-{(1R,2E)-3-[(2R,4a'R,5R,6'S,8'R,8a'S)-8'-hydroxy-6'-{(1S,3S)-1-hydroxy-3-[( 2S,6R,11S)-11-methyl-1,7-dioxaspiro[5.5]undec-2-yl]butyl}-7'-methylideneoctahydro-3H,3'H-spiro[furan-2,2'-pyrano[3,2-b]p yran]-5-yl]-1-methylprop-2-en-1-yl}-10-methyl-1,7-dioxaspiro[5.5]undec-10-en-2-yl]-2-methylpropanoic acid, MANGANESE (II) ION, SULFATE ION, ... 著者 Jeffrey, P.D, Huhn, J, Shi, Y. 登録日 2009-10-13 公開日 2009-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.96 Å) 主引用文献 A structural basis for the reduced toxicity of dinophysistoxin-2. Chem.Res.Toxicol., 22, 2009
6EO1	The electron crystallography structure of the cAMP-bound potassium channel MloK1 (PCO-refined) 分子名称: Cyclic nucleotide-gated potassium channel mll3241, POTASSIUM ION 著者 Kowal, J, Biyani, N, Chami, M, Scherer, S, Rzepiela, A, Baumgartner, P, Upadhyay, V, Nimigean, C, Stahlberg, H. 登録日 2017-10-08 公開日 2017-12-27 最終更新日 2024-05-15 実験手法 ELECTRON CRYSTALLOGRAPHY (4.5 Å) 主引用文献 High-Resolution Cryoelectron Microscopy Structure of the Cyclic Nucleotide-Modulated Potassium Channel MloK1 in a Lipid Bilayer. Structure, 26, 2018
2JON	Solution structure of the C-terminal domain Ole e 9 分子名称: Beta-1,3-glucanase 著者 Trevino, M.A, Palomares, O, Castrillo, I, Villalba, M, Rodriguez, R, Rico, M, Santoro, J, Bruix, M. 登録日 2007-03-14 公開日 2008-01-29 最終更新日 2023-12-20 実験手法 SOLUTION NMR 主引用文献 Solution structure of the C-terminal domain of Ole e 9, a major allergen of olive pollen Protein Sci., 17, 2008
4CD8	The structure of GH113 beta-mannanase AaManA from Alicyclobacillus acidocaldarius in complex with ManMIm 分子名称: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, ENDO-BETA-1,4-MANNANASE, beta-D-mannopyranose 著者 Williams, R.J, Iglesias-Fernandez, J, Stepper, J, Jackson, A, Thompson, A.J, Lowe, E.C, White, J.M, Gilbert, H.J, Rovira, C, Davies, G.J, Williams, S.J. 登録日 2013-10-30 公開日 2014-04-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Combined Inhibitor Free-Energy Landscape and Structural Analysis Reports on the Mannosidase Conformational Coordinate. Angew.Chem.Int.Ed.Engl., 53, 2014
4CD7	The structure of GH113 beta-mannanase AaManA from Alicyclobacillus acidocaldarius in complex with ManIFG and beta-1,4-mannobiose 分子名称: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, ENDO-BETA-1,4-MANNANASE, beta-D-mannopyranose, ... 著者 Williams, R.J, Iglesias-Fernandez, J, Stepper, J, Jackson, A, Thompson, A.J, Lowe, E.C, White, J.M, Gilbert, H.J, Rovira, C, Davies, G.J, Williams, S.J. 登録日 2013-10-30 公開日 2014-04-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Combined Inhibitor Free-Energy Landscape and Structural Analysis Reports on the Mannosidase Conformational Coordinate. Angew.Chem.Int.Ed.Engl., 53, 2014
4CD5	The structure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManMIm 分子名称: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, ENDO-1,4-BETA MANNANASE, PUTATIVE, ... 著者 Williams, R.J, Iglesias-Fernandez, J, Stepper, J, Jackson, A, Thompson, A.J, Lowe, E.C, White, J.M, Gilbert, H.J, Rovira, C, Davies, G.J, Williams, S.J. 登録日 2013-10-30 公開日 2014-04-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Combined Inhibitor Free-Energy Landscape and Structural Analysis Reports on the Mannosidase Conformational Coordinate. Angew.Chem.Int.Ed.Engl., 53, 2014
4CD4	The structure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManIFG 分子名称: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, ENDO-1,4-BETA MANNANASE, PUTATIVE, ... 著者 Williams, R.J, Iglesias-Fernandez, J, Stepper, J, Jackson, A, Thompson, A.J, Lowe, E.C, White, J.M, Gilbert, H.J, Rovira, C, Davies, G.J, Williams, S.J. 登録日 2013-10-30 公開日 2014-04-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Combined Inhibitor Free-Energy Landscape and Structural Analysis Reports on the Mannosidase Conformational Coordinate. Angew.Chem.Int.Ed.Engl., 53, 2014
4CD6	The structure of GH113 beta-mannanase AaManA from Alicyclobacillus acidocaldarius in complex with ManIFG 分子名称: 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, ENDO-BETA-1,4-MANNANASE, beta-D-mannopyranose 著者 Williams, R.J, Iglesias-Fernandez, J, Stepper, J, Jackson, A, Thompson, A.J, Lowe, E.C, White, J.M, Gilbert, H.J, Rovira, C, Davies, G.J, Williams, S.J. 登録日 2013-10-30 公開日 2014-04-02 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Combined Inhibitor Free-Energy Landscape and Structural Analysis Reports on the Mannosidase Conformational Coordinate. Angew.Chem.Int.Ed.Engl., 53, 2014
4OJL	Crystal Structure of Putative Tailspike Protein (TSP1, orf210) from Escherichia coli O157:H7 Bacteriohage CBA120 in Complex with Glucose 分子名称: Tailspike protein, ZINC ION, beta-D-glucopyranose 著者 Chen, C, Herzberg, O. 登録日 2014-01-21 公開日 2014-03-26 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of ORF210 from E. coli O157:H1 phage CBA120 (TSP1), a putative tailspike protein. Plos One, 9, 2014
4UUN	Trichomonas vaginalis lactate dehydrogenase in complex with NADH 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, L-LACTATE DEHYDROGENASE 著者 Steindel, P.A, Chen, E.H, Theobald, D.L. 登録日 2014-07-29 公開日 2015-08-12 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Gradual Neofunctionalization in the Convergent Evolution of Trichomonad Lactate and Malate Dehydrogenases. Protein Sci., 25, 2016
3D81	Sir2-S-alkylamidate complex crystal structure 分子名称: NAD-dependent deacetylase, S-alkylamidate intermediate, ZINC ION 著者 Hawse, W.F, Hoff, K.G, Fatkins, D, Daines, A, Zubkova, O.V, Schramm, V.L, Zheng, W, Wolberger, C. 登録日 2008-05-22 公開日 2008-09-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural insights into intermediate steps in the Sir2 deacetylation reaction. Structure, 16, 2008
4G0Z	Crystal structure of Arabidopsis thaliana AGO1 MID domain in complex with GMP 分子名称: GUANOSINE-5'-MONOPHOSPHATE, Protein argonaute 1 著者 Frank, F, Hauver, J, Sonenberg, N, Nagar, B. 登録日 2012-07-10 公開日 2012-07-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs. Embo J., 31, 2012
4UF7	Ghanaian henipavirus (Gh-M74a) attachment glycoprotein in complex with human ephrinB2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CHLORIDE ION, ... 著者 Lee, B, Pernet, O, Ahmed, A.A, Zeltina, A, Beaty, S.M, Bowden, T.A. 登録日 2015-03-13 公開日 2015-04-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular Recognition of Human Ephrinb2 Cell Surface Receptor by an Emergent African Henipavirus. Proc.Natl.Acad.Sci.USA, 112, 2015
5NZ7	Clostridium thermocellum cellodextrin phosphorylase ligand free form 分子名称: CHLORIDE ION, Cellodextrin phosphorylase 著者 O'Neill, E.C, Pergolizzi, G, Stevenson, C.E.M, Lawson, D.M, Nepogodiev, S.A, Field, R.A. 登録日 2017-05-12 公開日 2017-08-09 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Cellodextrin phosphorylase from Ruminiclostridium thermocellum: X-ray crystal structure and substrate specificity analysis. Carbohydr. Res., 451, 2017
4G0M	Crystal structure of Arabidopsis thaliana AGO2 MID domain 分子名称: Protein argonaute 2, SULFATE ION 著者 Frank, F, Hauver, J, Sonenberg, N, Nagar, B. 登録日 2012-07-09 公開日 2012-07-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.306 Å) 主引用文献 Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs. Embo J., 31, 2012
4G0Q	Crystal structure of Arabidopsis thaliana AGO1 MID domain in complex with CMP 分子名称: CYTIDINE-5'-MONOPHOSPHATE, Protein argonaute 1 著者 Frank, F, Hauver, J, Sonenberg, N, Nagar, B. 登録日 2012-07-09 公開日 2012-07-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Arabidopsis Argonaute MID domains use their nucleotide specificity loop to sort small RNAs. Embo J., 31, 2012
4U35	Crystal Structures of RNA Duplexes Containing 2-thio-Uridine 分子名称: RNA (5'-R(*GP*GP*UP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3') 著者 Sheng, J, Larsen, A, Heuberger, B, Blain, J.C, Szostak, J.W. 登録日 2014-07-18 公開日 2014-08-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure Studies of RNA Duplexes Containing s(2)U:A and s(2)U:U Base Pairs. J.Am.Chem.Soc., 136, 2014
4U37	Native 7mer-RNA duplex 分子名称: RNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3'), RNA (5'-R(*UP*AP*GP*CP*UP*CP*C)-3') 著者 Sheng, J, Larsen, A, Heuberger, B, Blain, J.C, Szostak, J.W. 登録日 2014-07-18 公開日 2014-08-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Crystal Structure Studies of RNA Duplexes Containing s(2)U:A and s(2)U:U Base Pairs. J.Am.Chem.Soc., 136, 2014
3LIO	X-ray structure of the iron superoxide dismutase from pseudoalteromonas haloplanktis (crystal form I) 分子名称: FE (III) ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, iron superoxide dismutase 著者 Merlino, A, Russo Krauss, I, Rossi, B, Conte, M, Vergara, A, Sica, F. 登録日 2010-01-25 公開日 2010-09-08 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure and flexibility in cold-adapted iron superoxide dismutases: the case of the enzyme isolated from Pseudoalteromonas haloplanktis. J.Struct.Biol., 172, 2010
4GGN	Malaria invasion machinery protein complex 分子名称: Myosin A tail domain interacting protein MTIP, Myosin-A 著者 Khamrui, S, Turley, S, Bergman, L.W, Hol, W.G.J. 登録日 2012-08-06 公開日 2013-07-03 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 The structure of the D3 domain of Plasmodium falciparum myosin tail interacting protein MTIP in complex with a nanobody. Mol.Biochem.Parasitol., 190, 2013
5O77	Klebsiella pneumoniae OmpK35 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, OmpK35 著者 van den berg, B, Pathania, M, Zahn, M. 登録日 2017-06-08 公開日 2018-06-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins. Acs Infect Dis., 4, 2018

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