PDB: 72703 件ウェブページステータス検索Chemie searchBIRD

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2C3A	Structure of unliganded HSV gD reveals a mechanism for receptor- mediated activation of virus entry 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCOPROTEIN D, ... 著者 Krummenacher, C, Supekar, V.M, Whitbeck, J.C, Lazear, E, Connolly, S.A, Eisenberg, R.J, Cohen, G.H, Wiley, D.C, Carfi, A. 登録日 2005-10-05 公開日 2005-12-21 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of Unliganded Hsv Gd Reveals a Mechanism for Receptor-Mediated Activation of Virus Entry. Embo J., 24, 2005
5LD9	Structure of deubiquitinating enzyme homolog, Pyrococcus furiosus JAMM1. 分子名称: CHLORIDE ION, JAMM1, ZINC ION 著者 Maupin-Furlow, J.A, Franzetti, B, Cao, S, Girard, E, Gabel, F, Engilberge, S. 登録日 2016-06-24 公開日 2017-05-17 最終更新日 2022-03-30 実験手法 X-RAY DIFFRACTION (1.733 Å) 主引用文献 Structural Insight into Ubiquitin-Like Protein Recognition and Oligomeric States of JAMM/MPN(+) Proteases. Structure, 25, 2017
2BSR	Crystal structures and KIR3DL1 recognition of three immunodominant viral peptides complexed to HLA-B2705 分子名称: BETA-2-MICROGLOBULIN, EPSTEIN-BARR NUCLEAR ANTIGEN-6, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ... 著者 Stewart-Jones, G.B.E, Di Gleria, K, Kollnberger, S, Mcmichael, A.J, Jones, E.Y, Bowness, P. 登録日 2005-05-23 公開日 2005-05-24 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structures and Kir3Dl1 Recognition of Three Immunodominant Viral Peptides Complexed to Hla-B2705 Eur.J.Immunol., 35, 2005
2BTC	BOVINE TRYPSIN IN COMPLEX WITH SQUASH SEED INHIBITOR (CUCURBITA PEPO TRYPSIN INHIBITOR II) 分子名称: CALCIUM ION, PROTEIN (TRYPSIN INHIBITOR), PROTEIN (TRYPSIN) 著者 Helland, R, Berglund, G.I, Otlewski, J, Apostoluk, W, Andersen, O.A, Willassen, N.P, Smalas, A.O. 登録日 1998-12-11 公開日 2000-01-19 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 High-resolution structures of three new trypsin-squash-inhibitor complexes: a detailed comparison with other trypsins and their complexes. Acta Crystallogr.,Sect.D, 55, 1999
7QI6	Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution 分子名称: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ... 著者 Singh, V, Itoh, Y, Amunts, A. 登録日 2021-12-14 公開日 2023-05-17 最終更新日 2024-07-31 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 Mitoribosome structure with cofactors and modifications reveals mechanism of ligand binding and interactions with L1 stalk. Nat Commun, 15, 2024
7QI5	Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution 分子名称: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ... 著者 Singh, V, Itoh, Y, Amunts, A. 登録日 2021-12-14 公開日 2023-07-05 最終更新日 2024-07-31 実験手法 ELECTRON MICROSCOPY (2.63 Å) 主引用文献 Mitoribosome structure with cofactors and modifications reveals mechanism of ligand binding and interactions with L1 stalk. Nat Commun, 15, 2024
1ERJ	CRYSTAL STRUCTURE OF THE C-TERMINAL WD40 DOMAIN OF TUP1 分子名称: TRANSCRIPTIONAL REPRESSOR TUP1 著者 Sprague, E.R, Redd, M.J, Johnson, A.D, Wolberger, C. 登録日 2000-04-06 公開日 2000-07-26 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the C-terminal domain of Tup1, a corepressor of transcription in yeast. EMBO J., 19, 2000
2BOG	Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside 分子名称: ENDOGLUCANASE E-2, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-methyl beta-D-glucopyranoside 著者 Larsson, A.M, Bergfors, T, Dultz, E, Irwin, D.C, Roos, A, Driguez, H, Wilson, D.B, Jones, T.A. 登録日 2005-04-10 公開日 2005-10-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.04 Å) 主引用文献 Crystal Structure of Thermobifida Fusca Endoglucanase Cel6A in Complex with Substrate and Inhibitor: The Role of Tyrosine Y73 in Substrate Ring Distortion. Biochemistry, 44, 2005
2BXT	Design and Discovery of Novel, Potent Thrombin Inhibitors with a Solubilizing Cationic P1-P2-Linker 分子名称: 6-CHLORO-1-(2-{[(5-CHLORO-1-BENZOTHIEN-3-YL)METHYL]AMINO}ETHYL)-3-[(2-PYRIDIN-2-YLETHYL)AMINO]-1,4-DIHYDROPYRAZIN-2-OL, ALPHA THROMBIN, HIRUDIN VARIANT-2 著者 Bulat, S, Bosio, S, Grabowski, E, Papadopoulos, M.A, Cerezo-Galvez, S, Rosenbaum, C, Matassa, V.G, Ott, I, Metz, G, Schamberger, J, Sekul, R, Feurer, A. 登録日 2005-07-27 公開日 2006-10-26 最終更新日 2016-12-21 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Design and Discovery of Novel, Potent Pyrazinone-Based Thrombin Inhibitors with a Solubilizing P1-P2-Linker Lett.Drug Des.Discovery, 3, 2006
2BSS	Crystal structures and KIR3DL1 recognition of three immunodominant viral peptides complexed to HLA-B2705 分子名称: BETA-2-MICROGLOBULIN, HIV PEPTIDE, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN B-27 ALPHA CHAIN 著者 Stewart-Jones, G.B.E, Di Gleria, K, Kollnberger, S, Mcmichael, A.J, Jones, E.Y, Bowness, P. 登録日 2005-05-23 公開日 2005-05-24 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structures and Kir3Dl1 Recognition of Three Immunodominant Viral Peptides Complexed to Hla-B2705 Eur.J.Immunol., 35, 2005
6D1V	Crystal structure of E. coli RppH-DapF complex, monomer bound to RNA 分子名称: CHLORIDE ION, Diaminopimelate epimerase, GLYCEROL, ... 著者 Gao, A, Serganov, A. 登録日 2018-04-12 公開日 2018-05-23 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structural and kinetic insights into stimulation of RppH-dependent RNA degradation by the metabolic enzyme DapF. Nucleic Acids Res., 46, 2018
1EOG	CRYSTAL STRUCTURE OF PI CLASS GLUTATHIONE TRANSFERASE 分子名称: GLUTATHIONE S-TRANSFERASE 著者 Rossjohn, J, McKinstry, W.J, Oakley, A.J, Parker, M.W, Stenberg, G, Mannervik, B, Dragani, B, Cocco, R, Aceto, A. 登録日 2000-03-22 公開日 2000-10-18 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of thermolabile mutants of human glutathione transferase P1-1. J.Mol.Biol., 302, 2000
2IYP	product rup 分子名称: 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING, ADENOSINE-2'-5'-DIPHOSPHATE, ... 著者 Sundaramoorthy, R, Iulek, J, Hunter, W.N. 登録日 2006-07-21 公開日 2007-01-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Crystal Structures of a Bacterial 6-Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates. FEBS J., 274, 2007
1EV8	CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI 分子名称: THYMIDYLATE SYNTHASE 著者 Phan, J, Mahdavian, E, Nivens, M.C, Minor, W, Berger, S, Spencer, H.T, Dunlap, R.B, Lebioda, L. 登録日 2000-04-19 公開日 2000-05-03 最終更新日 2022-04-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Catalytic cysteine of thymidylate synthase is activated upon substrate binding. Biochemistry, 39, 2000
2IZ1	6PDH complexed with PEX inhibitor synchrotron data 分子名称: 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID, ... 著者 Sundaramoorthy, R, Iulek, J, Hunter, W.N. 登録日 2006-07-23 公開日 2007-01-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structures of a Bacterial 6- Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates. FEBS J., 274, 2007
2IZ0	PEX inhibitor-home data 分子名称: 1,2-ETHANEDIOL, 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ... 著者 Sundaramoorthy, R, Iulek, J, Hunter, W.N. 登録日 2006-07-23 公開日 2007-01-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structures of a Bacterial 6- Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates. FEBS J., 274, 2007
1EOH	GLUTATHIONE TRANSFERASE P1-1 分子名称: GLUTATHIONE S-TRANSFERASE 著者 Rossjohn, J, McKinstry, W.J, Oakley, A.J, Parker, M.W, Stenberg, G, Mannervik, B, Dragani, B, Cocco, R, Aceto, A. 登録日 2000-03-22 公開日 2000-10-18 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structures of thermolabile mutants of human glutathione transferase P1-1. J.Mol.Biol., 302, 2000
1EH4	BINARY COMPLEX OF CASEIN KINASE-1 FROM S. POMBE WITH AN ATP COMPETITIVE INHIBITOR, IC261 分子名称: 3-[(2,4,6-TRIMETHOXY-PHENYL)-METHYLENE]-INDOLIN-2-ONE, CASEIN KINASE-1, SULFATE ION 著者 Mashhoon, N, Demaggio, A.J, Tereshko, V, Bergmeier, S.C, Egli, M, Hoekstra, M.F, Kuret, J. 登録日 2000-02-18 公開日 2001-09-19 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal Structure of a Conformation-Selective Casein Kinase-1 Inhibitor J.Biol.Chem., 275, 2000
1EVF	CRYSTAL STRUCTURE ANALYSIS OF CYS167 MUTANT OF ESCHERICHIA COLI 分子名称: SULFATE ION, THYMIDYLATE SYNTHASE 著者 Phan, J, Mahdavian, E, Nivens, M.C, Minor, W, Berger, S, Spencer, H.T, Dunlap, R.B, Lebioda, L. 登録日 2000-04-19 公開日 2000-05-03 最終更新日 2022-04-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Catalytic cysteine of thymidylate synthase is activated upon substrate binding. Biochemistry, 39, 2000
7T67	SARS-CoV-2 S (Spike Glycoprotein) D614G with One(1) RBD Up 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Byrne, P.O, McLellan, J.S. 登録日 2021-12-13 公開日 2022-08-24 最終更新日 2023-03-08 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 IgG-like bispecific antibodies with potent and synergistic neutralization against circulating SARS-CoV-2 variants of concern. Nat Commun, 13, 2022
7T3M	SARS-CoV-2 S (Spike Glycoprotein) D614G with Three (3) RBDs Up, Bound to Antibody 2-7 scFv, composite map 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 2-7 scFv, ... 著者 Byrne, P.O, McLellan, J.S. 登録日 2021-12-08 公開日 2022-08-24 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 IgG-like bispecific antibodies with potent and synergistic neutralization against circulating SARS-CoV-2 variants of concern. Nat Commun, 13, 2022
7QI4	Human mitochondrial ribosome at 2.2 A resolution (bound to partly built tRNAs and mRNA) 分子名称: 1,4-DIAMINOBUTANE, 12S mitochondrial rRNA, 16S mitochondrial rRNA, ... 著者 Singh, V, Itoh, Y, Amunts, A. 登録日 2021-12-14 公開日 2022-07-13 最終更新日 2024-07-31 実験手法 ELECTRON MICROSCOPY (2.21 Å) 主引用文献 Mitoribosome structure with cofactors and modifications reveals mechanism of ligand binding and interactions with L1 stalk. Nat Commun, 15, 2024
6HVD	Human SLK bound to a maleimide inhibitor 分子名称: 1,2-ETHANEDIOL, 3-(1,3-benzothiazol-2-ylamino)-4-(2-methoxyphenyl)pyrrole-2,5-dione, STE20-like serine/threonine-protein kinase, ... 著者 Sorrell, F.J, Berger, B.T, Salah, E, Serafim, R.A.M, Savitsky, P.A, Krojer, T, Bailey, H.J, Pinkas, D, Burgess-Brown, N.A, von Delft, F, Knapp, S, Arrowsmith, C, Bountra, C, Edwards, A.M, Elkins, J.M. 登録日 2018-10-10 公開日 2018-10-17 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Human SLK bound to a maleimide inhibitor To Be Published
2IYO	Structural characterization of a bacterial 6PDH reveals aspects of specificity, mechanism and mode of inhibition 分子名称: 6-PHOSPHOGLUCONATE DEHYDROGENASE, DECARBOXYLATING, 6-PHOSPHOGLUCONIC ACID, ... 著者 Sundaramoorthy, R, Iulek, J, Hunter, W.N. 登録日 2006-07-21 公開日 2007-01-23 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structures of a Bacterial 6-Phosphogluconate Dehydrogenase Reveal Aspects of Specificity, Mechanism and Mode of Inhibition by Analogues of High-Energy Reaction Intermediates. FEBS J., 274, 2007
2YOB	High resolution AGXT_M structure 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Fabelo-Rosa, I, Mesa-Torres, N, Riverol, D, Yunta, C, Albert, A, Salido, E, Pey, A.L. 登録日 2012-10-22 公開日 2013-10-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The Role of Protein Denaturation Energetics and Molecular Chaperones in the Aggregation and Mistargeting of Mutants Causing Primary Hyperoxaluria Type I Plos One, 8, 2013

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