Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7JUP
DownloadVisualize
BU of 7jup by Molmil
Structure of human TRPA1 in complex with antagonist compound 21
分子名称: 1-({3-[(3R,5R)-5-(4-fluorophenyl)oxolan-3-yl]-1,2,4-oxadiazol-5-yl}methyl)-7-methyl-1,7-dihydro-6H-purin-6-one, Transient receptor potential cation channel subfamily A member 1
著者Rohou, A, Rouge, L.
登録日2020-08-20
公開日2021-03-31
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Tetrahydrofuran-Based Transient Receptor Potential Ankyrin 1 (TRPA1) Antagonists: Ligand-Based Discovery, Activity in a Rodent Asthma Model, and Mechanism-of-Action via Cryogenic Electron Microscopy.
J.Med.Chem., 64, 2021
3I1D
DownloadVisualize
BU of 3i1d by Molmil
Distinct recognition of three-way DNA junctions by the two enantiomers of a metallo-supramolecular cylinder ('helicate')
分子名称: 5'-D(*CP*GP*TP*AP*CP*G)-3', FE (II) ION, N-[(1E)-PYRIDIN-2-YLMETHYLENE]-N-[4-(4-{[(1E)-PYRIDIN-2-YLMETHYLENE]AMINO}BENZYL)PHENYL]AMINE
著者Boer, D.R, Uson, I, Hannon, M.J, Coll, M.
登録日2009-06-26
公開日2011-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Self-Assembly of Functionalizable Two-Component 3D DNA Arrays through the Induced Formation of DNA Three-Way-Junction Branch Points by Supramolecular Cylinders.
Angew.Chem.Int.Ed.Engl., 49, 2010
7JGH
DownloadVisualize
BU of 7jgh by Molmil
Cryo-EM structure of P. falciparum VAR2CSA NF54 core in complex with CSA at 3.36 A
分子名称: 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, Erythrocyte membrane protein 1, beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid
著者Ma, R, Tolia, N.H.
登録日2020-07-19
公開日2021-01-13
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
7JGD
DownloadVisualize
BU of 7jgd by Molmil
Cryo-EM structure of P. falciparum VAR2CSA FCR3 core at 3.4 A
分子名称: Erythrocyte membrane protein 1
著者Ma, R, Tolia, N.H.
登録日2020-07-19
公開日2021-01-13
最終更新日2021-03-10
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
7JID
DownloadVisualize
BU of 7jid by Molmil
Crystal structure of the L780 UDP-rhamnose synthase from Acanthamoeba polyphaga mimivirus
分子名称: 1,2-ETHANEDIOL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, UDP-L-Rhamnose Synthase, ...
著者Bockhaus, N.J, Ferek, J.D, Thoden, J.B, Holden, H.M.
登録日2020-07-23
公開日2020-08-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The high-resolution structure of a UDP-L-rhamnose synthase from Acanthamoeba polyphaga Mimivirus.
Protein Sci., 29, 2020
5HSP
DownloadVisualize
BU of 5hsp by Molmil
MamM CTD M250L
分子名称: Magnetosome protein MamM, SULFATE ION
著者Barber-Zucker, S, Zarivach, R.
登録日2016-01-26
公開日2016-11-30
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Disease-Homologous Mutation in the Cation Diffusion Facilitator Protein MamM Causes Single-Domain Structural Loss and Signifies Its Importance.
Sci Rep, 6, 2016
7JHZ
DownloadVisualize
BU of 7jhz by Molmil
Crystal structure of the carbohydrate-binding domain VP8* of human P[8] rotavirus strain BM13851 in complex with LNDFH I
分子名称: GLYCEROL, Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose, ...
著者Xu, S, Stuckert, M.R, McGinnis, K.R, Jiang, X, Kennedy, M.A.
登録日2020-07-21
公開日2021-07-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural basis of P[II] rotavirus evolution and host ranges under selection of histo-blood group antigens.
Proc.Natl.Acad.Sci.USA, 118, 2021
7K53
DownloadVisualize
BU of 7k53 by Molmil
Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021
7K51
DownloadVisualize
BU of 7k51 by Molmil
Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021
7K50
DownloadVisualize
BU of 7k50 by Molmil
Pre-translocation non-frameshifting(CCA-A) complex (Structure I)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021
7K54
DownloadVisualize
BU of 7k54 by Molmil
Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021
7K52
DownloadVisualize
BU of 7k52 by Molmil
Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021
7K55
DownloadVisualize
BU of 7k55 by Molmil
Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A.
登録日2020-09-16
公開日2021-07-28
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation.
Nat Commun, 12, 2021
7KBE
DownloadVisualize
BU of 7kbe by Molmil
Nucleosome isolated from metaphase chromosome formed in Xenopus egg extract (oligo fraction)
分子名称: DNA (157-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBD
DownloadVisualize
BU of 7kbd by Molmil
Nucleosome in interphase chromosome formed in Xenopus egg extract (oligo fraction)
分子名称: DNA (151-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBF
DownloadVisualize
BU of 7kbf by Molmil
H1.8 bound nucleosome isolated from metaphase chromosome in Xenopus egg extract (oligo fraction)
分子名称: DNA (184-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.42 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
8CB9
DownloadVisualize
BU of 8cb9 by Molmil
PBP AccA from A. tumefaciens Bo542 in complex with D-Glucose-2-phosphate
分子名称: 2-O-phosphono-alpha-D-glucopyranose, 2-O-phosphono-beta-D-glucopyranose, Agrocinopine utilization periplasmic binding protein AccA
著者Morera, S, Vigouroux, A.
登録日2023-01-25
公開日2024-01-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献A highly conserved ligand-binding site for AccA transporters of antibiotic and quorum-sensing regulator in Agrobacterium leads to a different specificity.
Biochem.J., 481, 2024
6SHH
DownloadVisualize
BU of 6shh by Molmil
Human kallikrein 7 with aromatic coumarinic ester compound 1 covalently bound to H57
分子名称: (3-chlorophenyl) 6-methyl-2-oxidanylidene-chromene-3-carboxylate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Kallikrein-7, ...
著者Hanke, S, Straeter, N.
登録日2019-08-06
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Studies on the Inhibitory Binding Mode of Aromatic Coumarinic Esters to Human Kallikrein-Related Peptidase 7.
J.Med.Chem., 63, 2020
6ST3
DownloadVisualize
BU of 6st3 by Molmil
HIF prolyl hydroxylase 2 (PHD2/ EGLN1) in complex with 4-hydroxy-N-(4-phenoxybenzyl)-2-(1H-pyrazol-1-yl)pyrimidine-5-carboxamide
分子名称: 4-oxidanyl-~{N}-[(4-phenoxyphenyl)methyl]-2-pyrazol-1-yl-pyrimidine-5-carboxamide, Egl nine homolog 1, FORMIC ACID, ...
著者Chowdhury, R, Holt-Martyn, J.P, Schofield, C.J.
登録日2019-09-10
公開日2019-12-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.426 Å)
主引用文献Structure-Activity Relationship and Crystallographic Studies on 4-Hydroxypyrimidine HIF Prolyl Hydroxylase Domain Inhibitors.
Chemmedchem, 15, 2020
8D5K
DownloadVisualize
BU of 8d5k by Molmil
The complex of Pre-mRNA-Processing Factor 19 (Prpf19) peptide KYLQVASHV Presented by H2-Kd
分子名称: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-D alpha chain, ...
著者Custodio, J.M.F, Baker, B.M.
登録日2022-06-05
公開日2022-07-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.066 Å)
主引用文献Structural and physical features that distinguish tumor-controlling from inactive cancer neoepitopes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D5E
DownloadVisualize
BU of 8d5e by Molmil
The complex of Gtf2b Peptide TGAASFDEF Presented by H2-Dd
分子名称: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
著者Custodio, J.M.F, Baker, B.M.
登録日2022-06-04
公開日2022-07-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structural and physical features that distinguish tumor-controlling from inactive cancer neoepitopes.
Proc.Natl.Acad.Sci.USA, 120, 2023
6SOZ
DownloadVisualize
BU of 6soz by Molmil
Glycosylated Trypanosoma brucei transferrin receptor in complex with human transferrin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ESAG6, ...
著者Trevor, C, Carrington, M, Higgins, M.K.
登録日2019-08-30
公開日2019-11-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.42 Å)
主引用文献Structure of the trypanosome transferrin receptor reveals mechanisms of ligand recognition and immune evasion.
Nat Microbiol, 4, 2019
8D5F
DownloadVisualize
BU of 8d5f by Molmil
The complex of Gtf2b neoantigen TGAARFDEF Presented by H2-Dd
分子名称: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
著者Custodio, J.M.F, Baker, B.M.
登録日2022-06-04
公開日2022-07-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural and physical features that distinguish tumor-controlling from inactive cancer neoepitopes.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D6W
DownloadVisualize
BU of 8d6w by Molmil
Structure of the Mycobacterium tuberculosis 20S proteasome bound to the C-terminal GQYL motif of the ADP-bound Mpa ATPase
分子名称: Proteasome subunit alpha, Proteasome subunit beta, Proteasome-associated ATPase
著者Xiao, X, Li, H.
登録日2022-06-06
公開日2022-08-03
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation.
Msphere, 7, 2022
8D6V
DownloadVisualize
BU of 8d6v by Molmil
Structure of the Mycobacterium tuberculosis 20S proteasome bound to the C-terminal GQYL motif of the ATP-bound Mpa ATPase
分子名称: Proteasome subunit alpha, Proteasome subunit beta, Proteasome-associated ATPase
著者Xiao, X, Li, H.
登録日2022-06-06
公開日2022-08-03
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation.
Msphere, 7, 2022

225399

件を2024-09-25に公開中

PDB statisticsPDBj update infoContact PDBjnumon