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4QZZ
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yCP in complex with Omuralide
分子名称: CHLORIDE ION, MAGNESIUM ION, Omuralide, ...
著者Huber, E.M, Heinemeyer, W, Groll, M.
登録日2014-07-29
公開日2015-02-04
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914.
Structure, 23, 2015
4R2X
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BU of 4r2x by Molmil
Unique conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis uridine phosphorylase in the free form and in complex with uridine
分子名称: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
著者Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Veiko, V.P, Popov, V.O, Polyakov, K.M.
登録日2014-08-13
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献High-syn conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis MR-1 uridine phosphorylase in the free form and in complex with uridine.
Acta Crystallogr.,Sect.D, 70, 2014
4GLA
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OBody NL8 bound to hen egg-white lysozyme
分子名称: Lysozyme C, OBody NL8
著者Steemson, J.D.
登録日2012-08-14
公開日2013-08-14
最終更新日2014-02-12
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold.
Plos One, 9, 2014
4G4S
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BU of 4g4s by Molmil
Structure of Proteasome-Pba1-Pba2 Complex
分子名称: MAGNESIUM ION, N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-4-methyl-1-oxopentan-2-yl]-L-leucinamide, Proteasome assembly chaperone 2, ...
著者Kish-Trier, E, Robinson, H, Stadtmueller, B.M, Hill, C.P.
登録日2012-07-16
公開日2012-09-05
最終更新日2013-04-10
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure of a Proteasome Pba1-Pba2 Complex: IMPLICATIONS FOR PROTEASOME ASSEMBLY, ACTIVATION, AND BIOLOGICAL FUNCTION.
J.Biol.Chem., 287, 2012
4GK1
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BU of 4gk1 by Molmil
Crystal structure of CD23 lectin domain mutant D270A
分子名称: GLYCEROL, Low affinity immunoglobulin epsilon Fc receptor, SULFATE ION
著者Yuan, D, Sutton, B.J, Dhaliwal, B.
登録日2012-08-10
公開日2013-06-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.236 Å)
主引用文献Ca2+-dependent Structural Changes in the B-cell Receptor CD23 Increase Its Affinity for Human Immunoglobulin E.
J.Biol.Chem., 288, 2013
4FU4
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Human collagenase 3 (MMP-13) with peptide from pro-domain
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Stura, E.A, Vera, L, Visse, R, Nagase, H, Dive, V.
登録日2012-06-28
公開日2013-08-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.849 Å)
主引用文献Crystal structure of full-length human collagenase 3 (MMP-13) with peptides in the active site defines exosites in the catalytic domain.
Faseb J., 27, 2013
4FYM
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Crystal structure of Plasmodium falciparum orotate phosphoribosyltransferase
分子名称: Orotate phosphoribosyltransferase, SULFATE ION
著者Rathod, P.K, Kumar, S.
登録日2012-07-05
公開日2013-08-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of Plasmodium falciparum orotate phosphoribosyltransferase with autologous inhibitory protein-protein interactions.
Acta Crystallogr F Struct Biol Commun, 71, 2015
4HMQ
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Crystal structure of streptococcus pneumoniae TIGR4 PiaA in complex with ferrichrome
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Cheng, W, Li, Q, Jiang, Y.-L, Chen, Y, Zhou, C.-Z.
登録日2012-10-18
公開日2013-09-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of Streptococcus pneumoniae PiaA and Its Complex with Ferrichrome Reveal Insights into the Substrate Binding and Release of High Affinity Iron Transporters
Plos One, 8, 2013
4IAJ
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Crystal structure of a conserved domain protein (SP_1775) from Streptococcus pneumoniae TIGR4 at 1.91 A resolution
分子名称: 1,2-ETHANEDIOL, Conserved domain protein, MAGNESIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2012-12-06
公開日2013-02-06
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of a conserved domain protein (SP_1775) from Streptococcus pneumoniae TIGR4 at 1.91 A resolution
To be published
4I0U
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Improved structure of Thermotoga maritima CorA at 2.7 A resolution
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Nordin, N, Guskov, A, Phua, T, Sahaf, N, Xia, Y, Lu, S.Y, Eshaghi, H, Eshaghi, S.
登録日2012-11-19
公開日2013-03-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Exploring the structure and function of Thermotoga maritima CorA reveals the mechanism of gating and ion selectivity in Co2+/Mg2+ transport.
Biochem.J., 451, 2013
4HRD
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BU of 4hrd by Molmil
Crystal structure of yeast 20S proteasome in complex with the natural product carmaphycin A
分子名称: N-[(2S)-1-({(2S)-1-{[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]amino}-4-[(R)-methylsulfinyl]-1-oxobutan-2-yl}amino)-3-methyl-1-oxobutan-2-yl]hexanamide, Proteasome component C1, Proteasome component C11, ...
著者Trivella, D.B.B, Stein, M, Groll, M.
登録日2012-10-27
公開日2014-01-29
最終更新日2014-07-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor.
Chem.Biol., 21, 2014
4HZ3
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MthK pore crystallized in presence of TBSb
分子名称: Calcium-gated potassium channel mthK, HEXANE-1,6-DIOL, POTASSIUM ION
著者Posson, D.J, McCoy, J.G, Nimigean, C.M.
登録日2012-11-14
公開日2012-12-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The voltage-dependent gate in MthK potassium channels is located at the selectivity filter.
Nat.Struct.Mol.Biol., 20, 2013
4HRC
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BU of 4hrc by Molmil
Crystal structure of yeast 20S proteasome in complex with epoxyketone carmaphycin analogue 3
分子名称: N-hexanoyl-L-valyl-N~1~-[(2R,3S,4S)-1,3-dihydroxy-2,6-dimethylheptan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, Proteasome component C1, Proteasome component C11, ...
著者Trivella, D.B.B, Stein, M, Groll, M.
登録日2012-10-27
公開日2014-01-29
最終更新日2014-07-02
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor.
Chem.Biol., 21, 2014
4HXG
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Pyrococcus horikoshii acylaminoacyl peptidase (orthorhombic crystal form)
分子名称: CHLORIDE ION, HEXANE-1,6-DIOL, MAGNESIUM ION, ...
著者Kiss-Szeman, A, Menyhard, D.K, Tichy-Racs, E, Hornung, B, Radi, K, Szeltner, Z, Domokos, K, Szamosi, I, Naray-Szabo, G, Polgar, L, Harmat, V.
登録日2012-11-09
公開日2013-05-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Self-compartmentalizing Hexamer Serine Protease from Pyrococcus Horikoshii: SUBSTRATE SELECTION ACHIEVED THROUGH MULTIMERIZATION.
J.Biol.Chem., 288, 2013
4I8C
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BU of 4i8c by Molmil
X-ray structure of NikA in complex with Ni-(L-His)2
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Lebrette, H, Iannello, M, Fontecilla-Camps, J.C, Cavazza, C.
登録日2012-12-03
公開日2013-01-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献The binding mode of Ni-((L)-His)(2) in NikA revealed by X-ray crystallography.
J.Inorg.Biochem., 121C, 2012
3WZV
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BU of 3wzv by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-07
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3ZHR
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BU of 3zhr by Molmil
Crystal structure of the H747A mutant of the SucA domain of Mycobacterium smegmatis KGD showing the active site lid closed
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, MAGNESIUM ION, ...
著者Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
登録日2012-12-24
公開日2013-11-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3X0A
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BU of 3x0a by Molmil
Crystal structure of PIP4KIIBETA F205L complex with GMP
分子名称: GUANOSINE-5'-MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
2P0G
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Crystal structure of Selenoprotein W-related protein from Vibrio cholerae. Northeast Structural Genomics target VcR75
分子名称: Selenoprotein W-related protein
著者Benach, J, Neely, H, Seetharaman, J, Ho, C.K, Janjua, H, Cunningham, K, Ma, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-02-28
公開日2007-03-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Selenoprotein W-related protein from Vibrio cholerae.
To be Published
8HBB
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BU of 8hbb by Molmil
Crystal structure of Caenorhabditis elegans NMAD-1 in complex with ligand III
分子名称: CHLORIDE ION, DNA N6-methyl adenine demethylase, MANGANESE (II) ION
著者Shang, G, Chen, Z.
登録日2022-10-27
公開日2024-02-07
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Structural Basis of Nucleic Acid Recognition and 6mA Demethylation by Caenorhabditis elegans NMAD-1A.
Int J Mol Sci, 25, 2024
3X0B
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BU of 3x0b by Molmil
Crystal structure of PIP4KIIBETA I368A complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, Phosphatidylinositol 5-phosphate 4-kinase type-2 beta
著者Takeuchi, K, Lo, Y.H, Sumita, K, Senda, M, Terakawa, J, Dimitoris, A, Locasale, J.W, Sasaki, M, Yoshino, H, Zhang, Y, Kahoud, E.R, Takano, T, Yokota, T, Emerling, B, Asara, J.A, Ishida, T, Shimada, I, Daikoku, T, Cantley, L.C, Senda, T, Sasaki, A.T.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The Lipid Kinase PI5P4K beta Is an Intracellular GTP Sensor for Metabolism and Tumorigenesis
Mol.Cell, 61, 2016
3X1S
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Crystal structure of the nucleosome core particle
分子名称: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
著者Sivaraman, P, Kumarevel, T.S.
登録日2014-11-27
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming
Biochem.Biophys.Res.Commun., 464, 2015
3X3U
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Crystal structure of wild-type of E. coli CutA1
分子名称: Divalent-cation tolerance protein CutA
著者Tanaka, T, Matsuura, Y, Yutani, K.
登録日2015-02-12
公開日2015-04-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Crystal structure of wild-type of E. coli CutA1
To be Published
3KDN
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BU of 3kdn by Molmil
Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP
分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
登録日2009-10-23
公開日2010-10-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J.Biol.Chem., 285, 2010
3WZX
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S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published

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