PDB: 45459 件ウェブページステータス検索Chemie searchBIRD

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4KJS	Structure of native YfkE 分子名称: cation exchanger YfkE 著者 Wu, M, Tong, S, Zheng, L. 登録日 2013-05-03 公開日 2013-06-26 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Crystal structure of Ca2+/H+ antiporter protein YfkE reveals the mechanisms of Ca2+ efflux and its pH regulation. Proc.Natl.Acad.Sci.USA, 110, 2013
4LNN	B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of apo form of GS 分子名称: Glutamine synthetase, MAGNESIUM ION, SULFATE ION 著者 Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L. 登録日 2013-07-11 公開日 2013-11-13 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism. J.Biol.Chem., 288, 2013
4LNI	B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of the transition state complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, Glutamine synthetase, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ... 著者 Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L. 登録日 2013-07-11 公開日 2013-11-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5793 Å) 主引用文献 Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism. J.Biol.Chem., 288, 2013
4MBZ	Structure of B-Lymphotropic Polyomavirus VP1 in complex with 3'-sialyllactosamine 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Khan, Z.M, Neu, U, Stehle, T. 登録日 2013-08-21 公開日 2013-12-04 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands. Plos Pathog., 9, 2013
4KTR	Crystal structure of 2-O-alpha-glucosylglycerol phosphorylase in complex with isofagomine and glycerol 分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ... 著者 Touhara, K.K, Nihira, T, Kitaoka, M, Nakai, H, Fushinobu, S. 登録日 2013-05-21 公開日 2014-05-21 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for reversible phosphorolysis and hydrolysis reactions of 2-O-alpha-glucosylglycerol phosphorylase J.Biol.Chem., 289, 2014
4KHP	Structure of the Thermus thermophilus 30S ribosomal subunit in complex with de-6-MSA-pactamycin 分子名称: 16S Ribosomal RNA, 30S Ribosomal protein S10, 30S Ribosomal protein S11, ... 著者 Tourigny, D.S, Fernandez, I.S, Kelley, A.C, Ramakrishnan, V. 登録日 2013-05-01 公開日 2013-06-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal Structure of a Bioactive Pactamycin Analog Bound to the 30S Ribosomal Subunit. J.Mol.Biol., 425, 2013
4LSK	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the Ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Maehigashi, T, Dunkle, J.A, Dunham, C.M. 登録日 2013-07-22 公開日 2014-08-06 最終更新日 2014-12-10 実験手法 X-RAY DIFFRACTION (3.48000622 Å) 主引用文献 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4MCM	Human SOD1 C57S Mutant, As-isolated 分子名称: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION 著者 Sea, K, Sohn, S.H, Durazo, A, Sheng, Y, Shaw, B, Cao, X, Taylor, A.B, Whitson, L.J, Holloway, S.P, Hart, P.J, Cabelli, D.E, Gralla, E.B, Valentine, J.S. 登録日 2013-08-21 公開日 2014-08-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Insights into the role of the unusual disulfide bond in copper-zinc superoxide dismutase. J.Biol.Chem., 290, 2015
4LY6	Nucleotide-induced asymmetry within ATPase activator ring drives s54-RNAP interaction and ATP hydrolysis 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcriptional regulator (NtrC family), ... 著者 Sysoeva, T.A, Chowdhury, S, Guo, L, Nixon, B.T. 登録日 2013-07-30 公開日 2013-12-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Nucleotide-induced asymmetry within ATPase activator ring drives sigma 54-RNAP interaction and ATP hydrolysis. Genes Dev., 27, 2013
4M8D	Crystal structure of an isatin hydrolase bound to product analogue thioisatinate 分子名称: CALCIUM ION, MANGANESE (II) ION, Putative uncharacterized protein, ... 著者 Bjerregaard-Andersen, K, Sommer, T, Jensen, J.K, Jochimsen, B, Etzerodt, M, Morth, J.P. 登録日 2013-08-13 公開日 2014-06-18 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A proton wire and water channel revealed in the crystal structure of isatin hydrolase. J.Biol.Chem., 289, 2014
4I9D	X-ray structure of NikA in complex with Fe-N,N'-Bis(2-pyridylmethyl)-N-carboxymethyl-N'-methyl 分子名称: ACETATE ION, GLYCEROL, Nickel-binding periplasmic protein, ... 著者 Cherrier, M.V, Amara, P, Iannello, M, Cavazza, C. 登録日 2012-12-05 公開日 2013-04-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 An artificial oxygenase built from scratch: substrate binding site identified using a docking approach. Angew.Chem.Int.Ed.Engl., 52, 2013
4I42	E.coli. 1,4-dihydroxy-2-naphthoyl coenzyme A synthase (ecMenB) in complex with 1-hydroxy-2-naphthoyl-CoA 分子名称: 1,2-ETHANEDIOL, 1,4-Dihydroxy-2-naphthoyl-CoA synthase, 1-hydroxy-2-naphthoyl-CoA, ... 著者 Sun, Y, Song, H, Li, J, Li, Y, Jiang, M, Zhou, J, Guo, Z. 登録日 2012-11-27 公開日 2013-05-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.848 Å) 主引用文献 Structural basis of the induced-fit mechanism of 1,4-dihydroxy-2-naphthoyl coenzyme A synthase from the crotonase fold superfamily Plos One, 8, 2013
4MBX	Structure of unliganded B-Lymphotropic Polyomavirus VP1 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Major Capsid Protein VP1 著者 Khan, Z.M, Neu, U, Schuch, B, Stehle, T. 登録日 2013-08-21 公開日 2013-12-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structures of B-Lymphotropic Polyomavirus VP1 in Complex with Oligosaccharide Ligands. Plos Pathog., 9, 2013
4LR3	Crystal structure of E. coli YfbU at 2.5 A resolution 分子名称: MAGNESIUM ION, PHOSPHATE ION, protein YfbU 著者 Wang, J, Wing, R.A. 登録日 2013-07-19 公開日 2014-04-30 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Diamonds in the rough: a strong case for the inclusion of weak-intensity X-ray diffraction data. Acta Crystallogr.,Sect.D, 70, 2014
4LTC	Crystal structure of yeast 20S proteasome in complex with enone carmaphycin analogue 6 分子名称: N-hexanoyl-L-valyl-N~1~-[(4S,5S,6R)-5-hydroxy-2,6-dimethyloctan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, Probable proteasome subunit alpha type-7, Proteasome subunit alpha type-1, ... 著者 Stein, M, Trivella, D.B.B, Groll, M. 登録日 2013-07-23 公開日 2014-07-02 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor. Chem.Biol., 21, 2014
4LY8	dihydrodipicolinate synthase from C. jejuni with pyruvate bound to the active site 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ... 著者 Conly, C.J.T. 登録日 2013-07-30 公開日 2015-01-14 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Tyrosine 110 Plays a Critical Role in Regulating the Allosteric Inhibition of Campylobacter jejuni Dihydrodipicolinate Synthase by Lysine. Biochemistry, 53, 2014
4M08	Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W145V 分子名称: 1,2-ETHANEDIOL, Chlorite dismutase, IMIDAZOLE, ... 著者 Gysel, K, Hagmueller, A, Djinovic-Carugo, K. 登録日 2013-08-01 公開日 2014-01-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.799 Å) 主引用文献 Manipulating conserved heme cavity residues of chlorite dismutase: effect on structure, redox chemistry, and reactivity. Biochemistry, 53, 2014
4M3C	Structure of a binary complex between homologous tetrameric legume lectins from Butea monosperma and Spatholobus parviflorus seeds 分子名称: CALCIUM ION, GAMMA-AMINO-BUTANOIC ACID, GLYCEROL, ... 著者 Surya, S, Abhilash, J, Geethanandan, K, Sadasivan, C, Haridas, M. 登録日 2013-08-06 公開日 2013-09-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of a binary complex between homologous tetrameric legume lectins from Butea monosperma and Spatholobus parviflorus seeds To be Published
4M8L	crystal structure of RpiA-R5P complex 分子名称: CHLORIDE ION, FORMAMIDE, RIBULOSE-5-PHOSPHATE, ... 著者 Rostankowski, R, Borek, D, Orlikowska, M, Nakka, C, Grimshaw, S, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2013-08-13 公開日 2013-10-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.37 Å) 主引用文献 crystal structure of RpiA-R5P complex TO BE PUBLISHED
4MES	Crystal structure of ThiT complexed with LMG116 分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}ethanol, DI(HYDROXYETHYL)ETHER, ... 著者 Swier, L.J.Y.M, Guskov, A, Slotboom, D.J. 登録日 2013-08-27 公開日 2014-08-27 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of ThiT with small molecule modulators To be Published
4K3N	Phosphonic Arginine Mimetics as Inhibitors of the M17 Aminopeptidases from Plasmodium falciparum 分子名称: CARBONATE ION, M17 leucyl aminopeptidase, NONAETHYLENE GLYCOL, ... 著者 McGowan, S. 登録日 2013-04-11 公開日 2013-06-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Synthesis and Structure-Activity Relationships of Phosphonic Arginine Mimetics as Inhibitors of the M1 and M17 Aminopeptidases from Plasmodium falciparum. J.Med.Chem., 56, 2013
4KQ6	Product complex of lumazine synthase from candida glabrata 分子名称: 1-deoxy-1-(6,7-dimethyl-2,4-dioxo-3,4-dihydropteridin-8(2H)-yl)-D-ribitol, 6,7-dimethyl-8-ribityllumazine synthase, GLYCEROL, ... 著者 Shankar, M, Wilbanks, S.M, Nakatani, Y, Monk, B.C, Tyndall, J.D.A. 登録日 2013-05-14 公開日 2013-05-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Catalysis product captured in lumazine synthase from the fungal pathogen Candida glabrata. Acta Crystallogr.,Sect.D, 69, 2013
4KIW	Design and structural analysis of aromatic inhibitors of type II dehydroquinate dehydratase from Mycobacterium tuberculosis - compound 49e [5-[(3-nitrobenzyl)amino]benzene-1,3-dicarboxylic acid] 分子名称: 3-dehydroquinate dehydratase, 5-[(3-nitrobenzyl)amino]benzene-1,3-dicarboxylic acid 著者 Dias, M.V.B, Howard, N.G, Blundell, T.L, Abell, C. 登録日 2013-05-02 公開日 2014-05-14 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.57 Å) 主引用文献 Design and Structural Analysis of Aromatic Inhibitors of Type II Dehydroquinase from Mycobacterium tuberculosis. Chemmedchem, 10, 2015
4LZB	Uracil binding pocket in Vaccinia virus uracil DNA glycosylase 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Schormann, N, Chattopadhyay, D. 登録日 2013-07-31 公開日 2013-12-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Structure of the uracil complex of Vaccinia virus uracil DNA glycosylase. Acta Crystallogr.,Sect.F, 69, 2013
4M18	Crystal Structure of Surfactant Protein-D D325A/R343V mutant in complex with trimannose (Man-a1,2Man-a1,2Man) 分子名称: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose, ... 著者 Goh, B.C, Rynkiewicz, M.J, Cafarella, T.R, White, M.R, Hartshorn, K.L, Allen, K, Crouch, E.C, Calin, O, Seeberger, P.H, Schulten, K, Seaton, B.A. 登録日 2013-08-02 公開日 2013-12-04 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.203 Å) 主引用文献 Molecular mechanisms of inhibition of influenza by surfactant protein d revealed by large-scale molecular dynamics simulation. Biochemistry, 52, 2013

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