Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Z7O
DownloadVisualize
BU of 4z7o by Molmil
Integrin alphaIIbbeta3 in complex with AGDV peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Lin, F.Y, Zhu, J, Springer, T.A.
登録日2015-04-07
公開日2016-01-27
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献beta-Subunit Binding Is Sufficient for Ligands to Open the Integrin alpha IIb beta 3 Headpiece.
J.Biol.Chem., 291, 2016
5VJX
DownloadVisualize
BU of 5vjx by Molmil
Crystal structure of the CLOCK Transcription Domain Exon19 in Complex with a Repressor
分子名称: CLOCK-interacting pacemaker, Circadian locomoter output cycles protein kaput
著者Hou, Z, Su, L, Pei, J, Grishin, N.V, Zhang, H.
登録日2017-04-20
公開日2017-12-06
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (2.695 Å)
主引用文献Crystal Structure of the CLOCK Transactivation Domain Exon19 in Complex with a Repressor.
Structure, 25, 2017
6T9R
DownloadVisualize
BU of 6t9r by Molmil
Aplysia californica AChBP in complex with a cytisine derivative
分子名称: (1~{R},9~{S})-5-(3-oxidanylpropyl)-7,11-diazatricyclo[7.3.1.0^{2,7}]trideca-2,4-dien-6-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholine binding protein, ...
著者Davis, S, Hunter, W.N.
登録日2019-10-28
公開日2020-02-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The thermodynamic profile and molecular interactions of a C(9)-cytisine derivative-binding acetylcholine-binding protein from Aplysia californica.
Acta Crystallogr.,Sect.F, 76, 2020
7WZN
DownloadVisualize
BU of 7wzn by Molmil
PSI-LHCI from Chlamydomonas reinhardtii with bound ferredoxin
分子名称: CHLOROPHYLL A, CHLOROPHYLL A ISOMER, CHLOROPHYLL B, ...
著者Kurisu, G, Gerle, C, Mitsuoka, K, Kawamoto, A, Tanaka, H.
登録日2022-02-18
公開日2023-02-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Three structures of PSI-LHCI from Chlamydomonas reinhardtii suggest a resting state re-activated by ferredoxin.
Biochim Biophys Acta Bioenerg, 1864, 2023
5VFU
DownloadVisualize
BU of 5vfu by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
分子名称: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ...
著者Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
登録日2017-04-09
公開日2018-07-18
最終更新日2021-03-24
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
6TRA
DownloadVisualize
BU of 6tra by Molmil
Cryo- EM structure of the Thermosynechococcus elongatus photosystem I in the presence of cytochrome c6
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Koelsch, A, Radon, C, Baumert, A, Buerger, J, Miehlke, T, Lisdat, F, Zouni, A, Wendler, P.
登録日2019-12-18
公開日2020-09-16
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Current limits of structural biology: The transient interaction between cytochrome c6 and photosystem I
Curr.Opin.Struct.Biol., 2, 2020
4ZGC
DownloadVisualize
BU of 4zgc by Molmil
Crystal Structure Analysis of Kelch protein (with disulfide bond) from Plasmodium falciparum
分子名称: Kelch protein, UNKNOWN ATOM OR ION
著者Jiang, D.Q, Tempel, W, Loppnau, P, Graslund, S, He, H, Ravichandran, M, Seitova, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, El Bakkouri, M, Senisterra, G, Osman, K.T, Lovato, D.V, Hui, R, Hutchinson, A, Lin, Y.H, Structural Genomics Consortium (SGC)
登録日2015-04-22
公開日2015-06-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of kelch protein with disulfide bond from Plasmodium falciparum.
to be published
6JO6
DownloadVisualize
BU of 6jo6 by Molmil
Structure of the green algal photosystem I supercomplex with light-harvesting complex I
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Suga, M, Miyazaki, N, Takahashi, Y.
登録日2019-03-20
公開日2019-06-19
最終更新日2019-06-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of the green algal photosystem I supercomplex with a decameric light-harvesting complex I.
Nat.Plants, 5, 2019
6TNN
DownloadVisualize
BU of 6tnn by Molmil
Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
分子名称: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
登録日2019-12-09
公開日2020-09-30
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
6TEQ
DownloadVisualize
BU of 6teq by Molmil
Crystal structure of a galactokinase from Bifidobacterium infantis in complex with 2-deoxy-2-fluoro-galactose
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-deoxy-2-fluoro-alpha-D-galactopyranose, ...
著者Keenan, T, Parmeggiani, F, Fontenelle, C.Q, Malassis, J, Vendeville, J, Offen, W.A, Both, P, Huang, K, Marchesi, A, Heyam, A, Young, C, Charnock, S, Davies, G.J, Linclau, B, Flitsch, S.L, Fascione, M.A.
登録日2019-11-12
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Profiling Substrate Promiscuity of Wild-Type Sugar Kinases for Multi-fluorinated Monosaccharides.
Cell Chem Biol, 27, 2020
6JLO
DownloadVisualize
BU of 6jlo by Molmil
XFEL structure of cyanobacterial photosystem II (2F state, dataset2)
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Suga, M, Shen, J.R.
登録日2019-03-06
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an x-ray free-electron laser.
Science, 366, 2019
6TGF
DownloadVisualize
BU of 6tgf by Molmil
Pantoea stewartii WceF is a glycan biofilm modifying enzyme with a bacteriophage tailspike-like parallel beta-helix fold
分子名称: 1,2-ETHANEDIOL, Exopolysaccharide biosynthesis protein, TETRAETHYLENE GLYCOL
著者Irmscher, T, Roske, Y, Gayk, I, Heinemann, U, Barbirz, S.
登録日2019-11-15
公開日2020-11-25
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Pantoea stewartii WceF is a glycan biofilm-modifying enzyme with a bacteriophage tailspike-like fold.
J.Biol.Chem., 296, 2021
7UVY
DownloadVisualize
BU of 7uvy by Molmil
A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
5UO9
DownloadVisualize
BU of 5uo9 by Molmil
Structure of human endothelial nitric oxide synthase heme domain in complex with 7-[(3-Ethyl-5-((methylamino)methyl)phenoxy)methyl]quinolin-2-amine
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, 7-({3-ethyl-5-[(methylamino)methyl]phenoxy}methyl)quinolin-2-amine, ...
著者Chreifi, G, Li, H, Poulos, T.L.
登録日2017-01-31
公開日2017-05-03
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
7UVW
DownloadVisualize
BU of 7uvw by Molmil
A. baumannii ribosome: 70S with E-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVV
DownloadVisualize
BU of 7uvv by Molmil
A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UYI
DownloadVisualize
BU of 7uyi by Molmil
Crystal structure of the computationally optimized broadly reactive H1 influenza hemagglutinin P1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COBRA P1 HA, ...
著者Dzimianski, J.V, DuBois, R.M.
登録日2022-05-06
公開日2023-04-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into the broad protection against H1 influenza viruses by a computationally optimized hemagglutinin vaccine.
Commun Biol, 6, 2023
7UVZ
DownloadVisualize
BU of 7uvz by Molmil
A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVX
DownloadVisualize
BU of 7uvx by Molmil
A. baumannii 70S ribosome-Streptothricin-F complex
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.35 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UOW
DownloadVisualize
BU of 7uow by Molmil
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 034_32
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Monoclonal antibody 034_32 heavy chain, ...
著者Patel, A, Ortlund, E.
登録日2022-04-14
公開日2023-04-19
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Molecular basis of SARS-CoV-2 Omicron variant evasion from shared neutralizing antibody response.
Structure, 31, 2023
5V6D
DownloadVisualize
BU of 5v6d by Molmil
Crystal structure of nucleoside diphosphate kinase from Neisseria gonorrhoeae in complex with citrate
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Nucleoside diphosphate kinase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2017-03-16
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of nucleoside diphosphate kinase from Neisseria gonorrhoeae in complex with citrate
To be Published
6JO5
DownloadVisualize
BU of 6jo5 by Molmil
Structure of the green algal photosystem I supercomplex with light-harvesting complex I
分子名称: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Suga, M, Miyazaki, N, Takahashi, Y.
登録日2019-03-20
公開日2019-06-19
最終更新日2019-06-26
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of the green algal photosystem I supercomplex with a decameric light-harvesting complex I.
Nat.Plants, 5, 2019
6TML
DownloadVisualize
BU of 6tml by Molmil
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase hexamer, composite model
分子名称: ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit delta, ...
著者Muhleip, A, Kock Flygaard, R, Amunts, A.
登録日2019-12-04
公開日2020-12-16
最終更新日2021-01-20
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria.
Nat Commun, 12, 2021
5URW
DownloadVisualize
BU of 5urw by Molmil
Structure of the extended type VI secretion system sheath in Myxococcus xanthus
分子名称: Hcp, TssB, TssC
著者Chang, Y.-W, Rettberg, L.A, Jensen, G.J.
登録日2017-02-13
公開日2017-05-10
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (24 Å)
主引用文献In vivo structures of an intact type VI secretion system revealed by electron cryotomography.
EMBO Rep., 18, 2017
7USN
DownloadVisualize
BU of 7usn by Molmil
Crystal structure of ferritin 1 from Caenorhabditis elegans, FTN-1
分子名称: FE (III) ION, Ferritin, GLYCEROL, ...
著者Malcolm, T.R, Maher, M.J, Mubarak, S.S.M.
登録日2022-04-25
公開日2023-04-26
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.789 Å)
主引用文献Biochemical Characterization of Caenorhabditis elegans Ferritins.
Biochemistry, 62, 2023

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon