PDB: 35863 件ウェブページステータス検索Chemie searchBIRD

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3J7O	Structure of the mammalian 60S ribosomal subunit 分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... 著者 Voorhees, R.M, Fernandez, I.S, Scheres, S.H.W, Hegde, R.S. 登録日 2014-08-01 公開日 2014-09-03 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution. Cell(Cambridge,Mass.), 157, 2014
1XLT	Crystal structure of Transhydrogenase [(domain I)2:domain III] heterotrimer complex 分子名称: NAD(P) transhydrogenase subunit alpha part 1, NAD(P) transhydrogenase subunit beta, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Sundaresan, V, Chartron, J, Yamaguchi, M, Stout, C.D. 登録日 2004-09-30 公開日 2005-04-05 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Conformational Diversity in NAD(H) and Transhydrogenase Nicotinamide Nucleotide Binding Domains J.Mol.Biol., 346, 2005
2EUN	Cytochrome c peroxidase (CCP) in complex with 2,4-diaminopyrimidine 分子名称: PROTOPORPHYRIN IX CONTAINING FE, PYRIMIDINE-2,4-DIAMINE, cytochrome c peroxidase 著者 Brenk, R, Vetter, S.W, Boyce, S.E, Goodin, D.B, Shoichet, B.K. 登録日 2005-10-29 公開日 2006-04-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Probing molecular docking in a charged model binding site. J.Mol.Biol., 357, 2006
7XNY	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/- Kasumi-1 cells 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Cheng, J, Beckmann, R. 登録日 2022-04-30 公開日 2023-04-05 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 A Dynamic rRNA Ribomethylome Drives Stemness in Acute Myeloid Leukemia. Cancer Discov, 13, 2023
3JRM	Crystal structure of archaeal 20S proteasome in complex with mutated P26 activator 分子名称: Proteasome activator protein PA26, Proteasome subunit alpha, Proteasome subunit beta 著者 Stadtmueller, B.M, Whitby, F.G, Hill, C.P. 登録日 2009-09-08 公開日 2009-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural models for interactions between the 20S proteasome and its PAN/19S activators. J.Biol.Chem., 285, 2010
6ZME	SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complex 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Thoms, M, Buschauer, R, Ameismeier, M, Denk, T, Kratzat, H, Mackens-Kiani, T, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2020-07-02 公開日 2020-08-12 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural basis for translational shutdown and immune evasion by the Nsp1 protein of SARS-CoV-2. Science, 369, 2020
7XNX	High resolution cry-EM structure of the human 80S ribosome from SNORD127+/+ Kasumi-1 cells 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Cheng, J, Beckmann, R. 登録日 2022-04-30 公開日 2023-04-05 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 A Dynamic rRNA Ribomethylome Drives Stemness in Acute Myeloid Leukemia. Cancer Discov, 13, 2023
6EYV	Crystal structure of the pyoverdine maturation protein PvdP in complex with the mock substrates L-tyrosine and zinc. 分子名称: PvdP, TYROSINE, ZINC ION 著者 Poppe, J, Blankenfeldt, W. 登録日 2017-11-13 公開日 2018-08-01 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.704 Å) 主引用文献 Pseudomonas aeruginosapyoverdine maturation enzyme PvdP has a noncanonical domain architecture and affords insight into a new subclass of tyrosinases. J. Biol. Chem., 293, 2018
8BTL	Crystal structure of a complex between the E2 conjugating enzyme UBE2A and the E3 ligase module from UBR4 分子名称: Ubiquitin conjugating enzyme E2 A, ZINC ION, cDNA FLJ12511 fis, ... 著者 Virdee, S, Mabbitt, P.D, Barnsby-Greer, L. 登録日 2022-11-29 公開日 2023-12-13 最終更新日 2024-04-17 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 UBE2A and UBE2B are recruited by an atypical E3 ligase module in UBR4. Nat.Struct.Mol.Biol., 31, 2024
7D0N	Crystal structure of mouse CRY2 apo form 分子名称: Cryptochrome-2 著者 Miller, S.A, Aikawa, Y, Hirota, T. 登録日 2020-09-11 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural differences in the FAD-binding pockets and lid loops of mammalian CRY1 and CRY2 for isoform-selective regulation. Proc.Natl.Acad.Sci.USA, 118, 2021
6ZPK	Crystal structure of the unconventional kinetochore protein Trypanosoma brucei KKT4 BRCT domain 分子名称: GLYCEROL, SULFATE ION, Trypanosoma brucei KKT4 463-645 著者 Ludzia, P, Lowe, E.D, Marciano, G, Mohammed, S, Redfield, C, Akiyoshi, B. 登録日 2020-07-08 公開日 2020-10-21 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Structural characterization of KKT4, an unconventional microtubule-binding kinetochore protein. Structure, 29, 2021
7DLI	Crystal structure of mouse CRY1 in complex with KL001 compound 分子名称: 1,2-ETHANEDIOL, Cryptochrome-1, N-[(2R)-3-carbazol-9-yl-2-oxidanyl-propyl]-N-(furan-2-ylmethyl)methanesulfonamide 著者 Miller, S.A, Aikawa, Y, Hirota, T. 登録日 2020-11-27 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural differences in the FAD-binding pockets and lid loops of mammalian CRY1 and CRY2 for isoform-selective regulation. Proc.Natl.Acad.Sci.USA, 118, 2021
7D0M	Crystal structure of mouse CRY1 with bound cryoprotectant 分子名称: Cryptochrome-1, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL 著者 Miller, S.A, Aikawa, Y, Hirota, T. 登録日 2020-09-11 公開日 2021-06-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural differences in the FAD-binding pockets and lid loops of mammalian CRY1 and CRY2 for isoform-selective regulation. Proc.Natl.Acad.Sci.USA, 118, 2021
6Z6M	Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Wells, J.N, Buschauer, R, Mackens-Kiani, T, Best, K, Kratzat, H, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R. 登録日 2020-05-28 公開日 2020-07-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes. Plos Biol., 18, 2020
3TXS	Crystal Structure of phage 44RR small terminase gp16 分子名称: Terminase DNA packaging enzyme small subunit 著者 Sun, S, Xiang, Y, Rossmann, M.G. 登録日 2011-09-23 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages. Proc.Natl.Acad.Sci.USA, 109, 2012
6Z63	FtsE structure from Streptococus pneumoniae in complex with ADP at 1.57 A resolution (spacegroup P 21) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division ATP-binding protein FtsE 著者 Alcorlo, M, Straume, D, Havarstein, L.S, Hermoso, J.A. 登録日 2020-05-27 公開日 2020-09-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 Structural Characterization of the Essential Cell Division Protein FtsE and Its Interaction with FtsX in Streptococcus pneumoniae. Mbio, 11, 2020
4RD9	X-RAY STRUCTURE OF THE APO FORM OF THE AMYLOID PRECURSOR PROTEIN-LIKE PROTEIN 1 (APLP1) E2 DOMAIN 分子名称: Amyloid-like protein 1 著者 Dahms, S.O, Than, M.E. 登録日 2014-09-18 公開日 2015-03-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Interaction of the amyloid precursor protein-like protein 1 (APLP1) E2 domain with heparan sulfate involves two distinct binding modes. Acta Crystallogr.,Sect.D, 71, 2015
2Q7F	Crystal structure of YrrB: a TPR protein with an unusual peptide-binding site 分子名称: YrrB protein 著者 Oh, J, Han, D, Kim, K, Lim, H. 登録日 2007-06-06 公開日 2007-08-07 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Crystal structure of YrrB: A TPR protein with an unusual peptide-binding site Biochem.Biophys.Res.Commun., 360, 2007
2CJQ	Bovine viral diarrhea virus CP7-R12 RNA-dependent RNA polymerase 分子名称: RNA-DIRECTED RNA POLYMERASE 著者 Choi, K.H, Gallei, A, Becher, P, Rossmann, M.G. 登録日 2006-04-05 公開日 2006-07-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The Structure of Bovine Viral Diarrhea Virus RNA-Dependent RNA Polymerase and its Amino-Terminal Domain. Structure, 14, 2006
1QI8	DEOXYGENATED STRUCTURE OF A DISTAL POCKET HEMOGLOBIN MUTANT 分子名称: HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE 著者 Miele, A.E, Vallone, B, Santanche, S, Travaglini-Allocatelli, C, Bellelli, A, Brunori, M. 登録日 1999-06-07 公開日 1999-07-11 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Modulation of ligand binding in engineered human hemoglobin distal pocket. J.Mol.Biol., 290, 1999
6KYT	The structure of the M. tb toxin MazEF-mt1 complex 分子名称: Antitoxin MazE9, Endoribonuclease MazF9 著者 Xie, W, Chen, R, Zhou, J. 登録日 2019-09-20 公開日 2020-08-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.00101161 Å) 主引用文献 Conserved Conformational Changes in the Regulation ofMycobacterium tuberculosisMazEF-mt1. Acs Infect Dis., 6, 2020
6SWC	IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi 分子名称: 16S ribosomal rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Mechulam, Y, Schmitt, E. 登録日 2019-09-20 公開日 2020-02-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation. Commun Biol, 3, 2020
8BA9	CryoEM structure of GroEL-GroES-ADP.AlF3-Rubisco. 分子名称: 60 kDa chaperonin, ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, ... 著者 Gardner, S, Saibil, H.R. 登録日 2022-10-11 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structural basis of substrate progression through the bacterial chaperonin cycle. Proc Natl Acad Sci U S A, 120, 2023
8BA8	CryoEM structure of GroEL-ADP.BeF3-Rubisco. 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chaperonin GroEL, ... 著者 Gardner, S, Saibil, H.R. 登録日 2022-10-11 公開日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of substrate progression through the bacterial chaperonin cycle. Proc Natl Acad Sci U S A, 120, 2023
3FW4	Crystal structure of Siderocalin (NGAL, Lipocalin 2) complexed with Ferric Catechol 分子名称: CATECHOL, CHLORIDE ION, FE (III) ION, ... 著者 Clifton, M.C, Strong, R.K. 登録日 2009-01-16 公開日 2010-05-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Iron traffics in circulation bound to a siderocalin (Ngal)-catechol complex. Nat.Chem.Biol., 6, 2010

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