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3FDK
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BU of 3fdk by Molmil
Crystal structure of hydrolase DR0930 with promiscuous catalytic activity
分子名称: HYDROLASE DR0930, ZINC ION
著者Fedorov, A.A, Fedorov, L.V, Xiang, D.F, Raushel, F.M, Almo, S.C.
登録日2008-11-25
公開日2009-06-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Functional annotation and three-dimensional structure of Dr0930 from Deinococcus radiodurans, a close relative of phosphotriesterase in the amidohydrolase superfamily.
Biochemistry, 48, 2009
2WTF
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BU of 2wtf by Molmil
DNA polymerase eta in complex with the cis-diammineplatinum (II) 1,3- GTG intrastrand cross-link
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*TP*GP*GP*TP*GP*AP*GP*CP)-3', 5'-D(*TP*CP*TP*TP*CP*TP*GP*TP*GP*CP *TP*CP*AP*CP*CP*AP*CP)-3', ...
著者Reissner, T, Schneider, S, Ziv, O, Schorr, S, Livneh, Z, Carell, T.
登録日2009-09-16
公開日2010-03-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of a Cisplatin-(1,3-Gtg) Cross-Link within DNA Polymerase Eta.
Angew.Chem.Int.Ed.Engl., 49, 2010
4H2H
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BU of 4h2h by Molmil
Crystal structure of an enolase (mandalate racemase subgroup, target EFI-502101) from Pelagibaca bermudensis htcc2601, with bound mg and l-4-hydroxyproline betaine (betonicine)
分子名称: (2S,4R)-4-hydroxy-1,1-dimethylpyrrolidinium-2-carboxylate, (4S)-2-METHYL-2,4-PENTANEDIOL, IODIDE ION, ...
著者Vetting, M.W, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-09-12
公開日2012-10-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Discovery of new enzymes and metabolic pathways by using structure and genome context.
Nature, 502, 2013
4YXO
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BU of 4yxo by Molmil
Human Carbonic Anhydrase II complexed with an inhibitor with a benzenesulfonamide group (3).
分子名称: 4-ethylbenzenesulfonamide, Carbonic anhydrase 2, GLYCEROL, ...
著者Rechlin, C, Heine, A, Klebe, G.
登録日2015-03-23
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Kinetic and Structural Insights into the Mechanism of Binding of Sulfonamides to Human Carbonic Anhydrase by Computational and Experimental Studies.
J.Med.Chem., 59, 2016
2CKJ
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BU of 2ckj by Molmil
Human milk xanthine oxidoreductase
分子名称: ACETIC ACID, FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Pearson, A.R, Godber, B.L.J, Eisenthal, R, Taylor, G.L, Harrison, R.
登録日2006-04-19
公開日2007-05-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.59 Å)
主引用文献Human Milk Xanthine Dehydrogenase is Incompletely Converted to the Oxidase Form in the Absence of Proteolysis. A Structural Explanation.
To be Published
2CX9
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BU of 2cx9 by Molmil
Crystal structure of acyl-CoA dehydrogenase
分子名称: CHLORIDE ION, acyl-CoA dehydrogenase
著者Murayama, K, Kinebuchi, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-06-28
公開日2005-12-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of acyl-CoA dehydrogenase
To be Published
3FH6
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BU of 3fh6 by Molmil
Crystal structure of the resting state maltose transporter from E. coli
分子名称: Maltose transport system permease protein malF, Maltose transport system permease protein malG, Maltose/maltodextrin import ATP-binding protein malK
著者Khare, D, Oldham, M.L, Orelle, C, Davidson, A.L, Chen, J.
登録日2008-12-08
公開日2009-03-03
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献Alternating access in maltose transporter mediated by rigid-body rotations.
Mol.Cell, 33, 2009
3FID
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BU of 3fid by Molmil
LpxR from Salmonella typhimurium
分子名称: GLYCEROL, PENTAETHYLENE GLYCOL MONODECYL ETHER, Putative outer membrane protein (LpxR), ...
著者Rutten, L, Gros, P.
登録日2008-12-11
公開日2009-02-10
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Active-site architecture and catalytic mechanism of the lipid A deacylase LpxR of Salmonella typhimurium
Proc.Natl.Acad.Sci.USA, 106, 2009
5B26
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BU of 5b26 by Molmil
Crystal structure of mouse SEL1L
分子名称: Protein sel-1 homolog 1
著者Jeong, H, Lee, C.
登録日2016-01-09
公開日2016-04-27
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of SEL1L: Insight into the roles of SLR motifs in ERAD pathway
Sci Rep, 6, 2016
3FJJ
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BU of 3fjj by Molmil
Crystal structure of C83V mutant of Human acidic fibroblast growth factor
分子名称: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
著者Blaber, M, Lee, J.
登録日2008-12-14
公開日2009-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of conserved cysteine in the fibroblast growth factor family: evidence for a vestigial half-cystine.
J.Mol.Biol., 393, 2009
4Z0I
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BU of 4z0i by Molmil
Crystal structure of a tetramer of GluA2 ligand binding domains bound with glutamate at 1.45 Angstrom resolution
分子名称: DI(HYDROXYETHYL)ETHER, GLUTAMIC ACID, Glutamate receptor 2,Glutamate receptor 2, ...
著者Baranovic, J, Chebli, M, Salazar, H, Carbone, A.L, Ghisi, V, Faelber, K, Lau, A.Y, Daumke, O, Plested, A.J.R.
登録日2015-03-26
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystal structure of the tetrameric wt GluA2 ligand-binding domain bound to glutamate at 1.45 Angstroms resolution
To Be Published
1KAT
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BU of 1kat by Molmil
Solution Structure of a Phage-Derived Peptide Antagonist in Complex with Vascular Endothelial Growth Factor
分子名称: Phage-Derived Peptide Antagonist, Vascular Endothelial Growth Factor
著者Pan, B, Li, B, Russell, S.J, Tom, J.Y.K, Cochran, A.G, Fairbrother, W.J.
登録日2001-11-02
公開日2002-11-02
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Solution Structure of a Phage-derived Peptide Antagonist in Complex with Vascular Endothelial Growth Factor
J.Mol.Biol., 316, 2002
4Z14
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BU of 4z14 by Molmil
Recombinantly expressed latent aurone synthase (polyphenol oxidase)
分子名称: Aurone synthase, COPPER (II) ION
著者Molitor, C, Mauracher, S.G, Rompel, A.
登録日2015-03-26
公開日2016-06-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Recombinantly expressed latent aurone synthase (polyphenol oxidase)
To Be Published
2X4R
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BU of 2x4r by Molmil
Crystal structure of MHC CLass I HLA-A2.1 bound to Cytomegalovirus (CMV) pp65 epitope
分子名称: 65 KDA PHOSPHOPROTEIN, BETA-2-MICROGLOBULIN, GLYCEROL, ...
著者Celie, P.H.N, Toebes, M, Rodenko, B, Ovaa, H, Perrakis, A, Schumacher, T.N.M.
登録日2010-02-02
公開日2010-03-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Uv-Induced Ligand Exchange in Mhc Class I Protein Crystals.
J.Am.Chem.Soc., 131, 2009
4H1Y
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BU of 4h1y by Molmil
Human ecto-5'-nucleotidase (CD73): crystal form II (open) in complex with PSB11552
分子名称: 2,2'-[(2-{[2-({[(2S,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]carbonyl}amino)ethyl]amino}-2-oxoethyl)imino]diacetic acid (non-preferred name), 5'-nucleotidase, CALCIUM ION, ...
著者Pippel, J, Zebisch, M, Knapp, K, Straeter, N.
登録日2012-09-11
公開日2012-11-28
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Crystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling.
Structure, 20, 2012
5B3D
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BU of 5b3d by Molmil
Structure of a flagellar type III secretion chaperone, FlgN
分子名称: Flagella synthesis protein FlgN
著者Nakanishi, Y, Kinoshita, M, Namba, K, Minamino, T, Imada, K.
登録日2016-02-15
公開日2016-06-01
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Rearrangements of alpha-helical structures of FlgN chaperone control the binding affinity for its cognate substrates during flagellar type III export
Mol.Microbiol., 101, 2016
2D00
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BU of 2d00 by Molmil
Subunit F of V-type ATPase/synthase
分子名称: CALCIUM ION, V-type ATP synthase subunit F
著者Makyio, H, Iino, R, Ikeda, C, Imamura, H, Tamakoshi, M, Iwata, M, Stock, D, Bernal, R.A, Carpenter, E.P, Yoshida, M, Yokoyama, K, Iwata, S.
登録日2005-07-21
公開日2005-12-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of a central stalk subunit F of prokaryotic V-type ATPase/synthase from Thermus thermophilus
Embo J., 24, 2005
5B4N
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BU of 5b4n by Molmil
Structure analysis of function associated loop mutant of substrate recognition domain of Fbs1 ubiquitin ligase
分子名称: F-box only protein 2
著者Nishio, K, Yoshida, Y, Tanaka, K, Mizushima, T.
登録日2016-04-06
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural analysis of a function-associated loop mutant of the substrate-recognition domain of Fbs1 ubiquitin ligase
Acta Crystallogr.,Sect.F, 72, 2016
3FLP
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BU of 3flp by Molmil
Crystal structure of native heptameric SAP-like pentraxin from Limulus polyphemus
分子名称: CALCIUM ION, SAP-like pentraxin
著者Shrive, A.K, Greenhough, T.J, Armstrong, P.B.
登録日2008-12-19
公開日2009-01-20
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of Limulus SAP-like pentraxin reveal two molecular aggregations.
J.Mol.Biol., 386, 2009
4ZM5
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BU of 4zm5 by Molmil
Shigella flexneri lipopolysaccharide O-antigen chain-length regulator WzzBSF - A107P mutant
分子名称: CHLORIDE ION, Chain length determinant protein, MAGNESIUM ION
著者Ericsson, D.J, Chang, C.-W, Lonhienne, T, Casey, L, Benning, F, Kobe, B, Tran, E.N.H, Morona, R.
登録日2015-05-02
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structural and Biochemical Analysis of a Single Amino-Acid Mutant of WzzBSF That Alters Lipopolysaccharide O-Antigen Chain Length in Shigella flexneri.
Plos One, 10, 2015
6BQD
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BU of 6bqd by Molmil
TAF1-BD2 bromodomain in complex with (E)-3-(6-(but-2-en-1-yl)-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl)-N,N-dimethylbenzamide
分子名称: 3-{6-[(2E)-but-2-en-1-yl]-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridin-4-yl}-N,N-dimethylbenzamide, Transcription initiation factor TFIID subunit 1
著者Murray, J.M, Tang, Y.
登録日2017-11-27
公開日2019-02-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.136 Å)
主引用文献Water molecules in protein-ligand interfaces. Evaluation of software tools and SAR comparison.
J. Comput. Aided Mol. Des., 33, 2019
6BSC
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BU of 6bsc by Molmil
Crystal structure of the Mucin-1 SEA domain
分子名称: Mucin-1
著者Noguera, M.E, Jakoncic, J, Ermacora, M.R.
登録日2017-12-01
公開日2018-12-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.303 Å)
主引用文献High-resolution structure of intramolecularly proteolyzed human mucin-1 SEA domain.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
5AP0
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BU of 5ap0 by Molmil
Naturally Occurring Mutations in the MPS1 Gene Predispose Cells to Kinase Inhibitor Drug Resistance.
分子名称: 1,2-ETHANEDIOL, 9-CYCLOPENTYL-2-[[2-METHOXY-4-[(1-METHYLPIPERIDIN-4-YL)OXY]-PHENYL]AMINO]-7-METHYL-7,9-DIHYDRO-8H-PURIN-8-ONE, DIMETHYL SULFOXIDE, ...
著者Gurden, M.D, Westwood, I.M, Faisal, A, Naud, S, Cheung, K.J, McAndrew, C, Wood, A, Schmitt, J, Boxall, K, Mak, G, Workman, P, Burke, R, Hoelder, S, Blagg, J, van Montfort, R.L.M, Linardopoulos, S.
登録日2015-09-14
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Naturally Occurring Mutations in the Mps1 Gene Predispose Cells to Kinase Inhibitor Drug Resistance.
Cancer Res., 75, 2015
4Z6E
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BU of 4z6e by Molmil
Structure of human DNA polymerase beta 279NA mutant complexed with G in the template base paired with incoming non-hydrolyzable TTP and MANGANESE
分子名称: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*GP*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ...
著者Koag, M.-C, Lee, S.
登録日2015-04-04
公開日2016-04-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.752 Å)
主引用文献Insights into the effect of minor groove interactions and metal cofactors on mutagenic replication by human DNA polymerase beta.
Biochem. J., 475, 2018
3FJG
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BU of 3fjg by Molmil
Crystal structure of 3PG bound PEB3
分子名称: 3-PHOSPHOGLYCERIC ACID, Major antigenic peptide PEB3
著者Min, T, Matte, A, Cygler, M.
登録日2008-12-14
公開日2009-03-10
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Specificity of Campylobacter jejuni adhesin PEB3 for phosphates and structural differences among its ligand complexes.
Biochemistry, 48, 2009

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