PDB: 30867 件ウェブページステータス検索Chemie searchBIRD

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5FDB	Iron free rat cysteine dioxygenase R60QC164R variant 分子名称: Cysteine dioxygenase type 1 著者 Fellner, M, Davies, C.G, Tchesnokov, E.P, Jameson, G.N.L, Wilbanks, S.M. 登録日 2015-12-16 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Iron free rat cysteine dioxygenase R60QC164R variant To be published
6KN5	Crystal structure of AFF4 C-terminal domain 分子名称: AF4/FMR2 family member 4 著者 Chen, L.J, Yang, W.S, Xu, R.M. 登録日 2019-08-03 公開日 2020-07-08 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Acetylation of histone H3K27 signals the transcriptional elongation for estrogen receptor alpha. Commun Biol, 3, 2020
6DR6	X-ray crystallographic structure of a covalent trimer derived from A-beta 17_36 containing the F20Cha point mutation 分子名称: ORT-CYS-VAL-PHE-XXX-CYS-GLU-ASP-ORT-ALA-ILE-ILE-GLY-LEU-ORA-VAL 著者 Salveson, P.J, Nowick, J.S. 登録日 2018-06-11 公開日 2018-10-17 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2.608 Å) 主引用文献 Repurposing Triphenylmethane Dyes to Bind to Trimers Derived from A beta. J. Am. Chem. Soc., 140, 2018
5WGI	Ultrahigh resolution crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with TSA 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Porter, N.J, Christianson, D.W. 登録日 2017-07-14 公開日 2017-12-06 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Unusual zinc-binding mode of HDAC6-selective hydroxamate inhibitors. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5WGX	Crystal Structure of MalA' H253A, malbrancheamide B complex 分子名称: (5aS,12aS,13aS)-9-chloro-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one, CADMIUM ION, CHLORIDE ION, ... 著者 Fraley, A.E, Smith, J.L. 登録日 2017-07-14 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.973 Å) 主引用文献 Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids. J. Am. Chem. Soc., 139, 2017
6D6W	Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate 分子名称: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ... 著者 Walton, W.G, Pellock, S.J, Redinbo, M.R. 登録日 2018-04-23 公開日 2018-10-17 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis. J. Biol. Chem., 293, 2018
5FG5	Crystal structure of the bromodomain of human BRPF1 in complex with PFI-4 chemical probe 分子名称: NITRATE ION, Peregrin, ~{N}-(1,3-dimethyl-2-oxidanylidene-6-pyrrolidin-1-yl-benzimidazol-5-yl)-2-methoxy-benzamide 著者 Tallant, C, Owen, D.R, Gerstenberger, B.S, Savitsky, P, Chaikuad, A, Fedorov, O, Nunez-Alonso, G, Filippakopoulos, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Muller, S, Brennan, P.E, Knapp, S. 登録日 2015-12-20 公開日 2015-12-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of the bromodomain of human BRPF1 in complex with PFI-4 chemical probe To Be Published
5WEG	Crystal Structure of UDP-glucose pyrophosphorylase from Sugarcane 分子名称: 1,2-ETHANEDIOL, SULFATE ION, UTP--glucose-1-phosphate uridylyltransferase 著者 Cotrim, C.A, Soares, J.S.M, Kobe, B, Menossi, M. 登録日 2017-07-10 公開日 2018-03-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure and insights into the oligomeric state of UDP-glucose pyrophosphorylase from sugarcane. PLoS ONE, 13, 2018
6KAP	Carbonmonoxy human hemoglobin C in the R quaternary structure at 95 K: Light 分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A. 登録日 2019-06-23 公開日 2020-02-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Direct observation of ligand migration within human hemoglobin at work. Proc.Natl.Acad.Sci.USA, 117, 2020
6KAT	Carbonmonoxy human hemoglobin A in the R2 quaternary structure at 95 K: Light 分子名称: CARBON MONOXIDE, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Shibayama, N, Park, S.Y, Ohki, M, Sato-Tomita, A. 登録日 2019-06-24 公開日 2020-02-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Direct observation of ligand migration within human hemoglobin at work. Proc.Natl.Acad.Sci.USA, 117, 2020
6KAZ	X-ray structure of human PPARalpha ligand binding domain-pemafibrate co-crystals obtained by soaking 分子名称: (2~{R})-2-[3-[[1,3-benzoxazol-2-yl-[3-(4-methoxyphenoxy)propyl]amino]methyl]phenoxy]butanoic acid, GLYCEROL, Peroxisome proliferator-activated receptor alpha 著者 Kamata, S, Suda, K, Saito, K, Oyama, T, Ishii, I. 登録日 2019-06-24 公開日 2020-11-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates. Iscience, 23, 2020
7MBG	SARS-CoV-2 Main protease in orthorhombic space group 分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE 著者 Fearon, D, Douangamath, A, von Delft, F, Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S. 登録日 2021-03-31 公開日 2021-04-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process. J.Mol.Biol., 433, 2021
5FHW	Hen Egg-White Lysozyme (HEWL) complexed with Hf(IV)-substituted Wells Dawson-type polyoxometalate 分子名称: Dawson-type polyoxometalate, Lysozyme C, POTASSIUM ION 著者 Vandebroek, L, De Zitter, E, Van Meervelt, L. 登録日 2015-12-22 公開日 2017-01-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Structural Characterization of the Complex between Hen Egg- White Lysozyme and HfIV-Substituted Wells Dawson Polyoxometalate as Artificial Protease To Be Published
6KB5	X-ray structure of human PPARalpha ligand binding domain-5,8,11,14-eicosatetraynoic Acid (ETYA) co-crystals obtained by delipidation and cross-seeding 分子名称: GLYCEROL, Peroxisome proliferator-activated receptor alpha, icosa-5,8,11,14-tetraynoic acid 著者 Kamata, S, Saito, K, Honda, A, Ishikawa, R, Oyama, T, Ishii, I. 登録日 2019-06-24 公開日 2020-11-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates. Iscience, 23, 2020
6DS7	Crystal structure of MhuD R26S mutant with two hemes bound per active site 分子名称: CHLORIDE ION, Heme-degrading monooxygenase HmoB, PROTOPORPHYRIN IX CONTAINING FE 著者 Chao, A, Goulding, C.W. 登録日 2018-06-13 公開日 2019-06-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of MhuD R26S mutant with two hemes bound per active site To Be Published
6KBA	X-ray structure of human PPARalpha ligand binding domain-Wy14643 co-crystals obtained by co-crystallization 分子名称: 2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID, Peroxisome proliferator-activated receptor alpha 著者 Kamata, S, Suda, K, Saito, K, Oyama, T, Ishii, I. 登録日 2019-06-24 公開日 2020-11-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates. Iscience, 23, 2020
6D99	Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GalNAc (open, oxidized) 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, ISOPROPYL ALCOHOL, SODIUM ION, ... 著者 Wangkanont, K, Kiessling, L.L, Forest, K.T. 登録日 2018-04-28 公開日 2019-05-15 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Substrate recognition by FAD in UDP-galactopyranose mutase To be published
5WLY	E. coli LpxH- 8 mutations 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FORMIC ACID, ... 著者 Bohl, T.E, Aihara, H, Shi, K, Lee, J.K. 登録日 2017-07-28 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The substrate-binding cap of the UDP-diacylglucosamine pyrophosphatase LpxH is highly flexible, enabling facile substrate binding and product release. J. Biol. Chem., 293, 2018
6DTG	Crystal structure of Haemophilus influenzae OppA complex with YLGANGRGGGS 分子名称: Periplasmic oligopeptide-binding protein, TYR-LEU-GLY-ALA-ASN-GLY 著者 Tanaka, K.J, Pinkett, H.W. 登録日 2018-06-16 公開日 2018-11-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket. J. Biol. Chem., 294, 2019
7M1V	Structure of Zika virus NS2b-NS3 protease mutant binding the compound NSC86314 in the super-open conformation 分子名称: 1,2-ETHANEDIOL, 4-(2-{2,4-diamino-5-[2-(4-{[(2E)-1,3-thiazolidin-2-ylidene]sulfamoyl}phenyl)hydrazinyl]phenyl}hydrazinyl)-N-[(2S)-1,3-thiazolidin-2-yl]benzene-1-sulfonamide, CHLORIDE ION, ... 著者 Aleshin, A.E, Shiryaev, S.A, Liddington, R.C. 登録日 2021-03-15 公開日 2021-04-21 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 To be provided To Be Published
5WGS	Crystal Structure of MalA' H253F, premalbrancheamide complex 分子名称: (5aS,12aS,13aS)-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one, CADMIUM ION, CHLORIDE ION, ... 著者 Fraley, A.E, Smith, J.L. 登録日 2017-07-14 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids. J. Am. Chem. Soc., 139, 2017
5FMC	Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with fructose and BIS-TRIS propane buffer 分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Ramirez-Escudero, M, Sanz-Aparicio, J. 登録日 2015-11-02 公開日 2016-02-10 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structural Analysis of Beta-Fructofuranosidase from Xanthophyllomyces Dendrorhous Reveals Unique Features and the Crucial Role of N-Glycosylation in Oligomerization and Activity J.Biol.Chem., 291, 2016
5WHF	Crystal structure of vimentin coil 1B packed in a high-order filamentous form 分子名称: GLYCEROL, Vimentin 著者 Obiero, J.M, Pang, A.H, Tsodikov, O.V. 登録日 2017-07-16 公開日 2018-06-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 A crystal structure of coil 1B of vimentin in the filamentous form provides a model of a high-order assembly of a vimentin filament. FEBS J., 285, 2018
5GUH	Crystal structure of silkworm PIWI-clade Argonaute Siwi bound to piRNA 分子名称: MAGNESIUM ION, PIWI, RNA (28-MER) 著者 Matsumoto, N, Nishimasu, H, Ishitani, R, Nureki, O. 登録日 2016-08-29 公開日 2016-10-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of Silkworm PIWI-Clade Argonaute Siwi Bound to piRNA Cell, 167, 2016
6K07	Crystal structure of REV7(R124A) in complex with a Shieldin3 fragment 分子名称: Mitotic spindle assembly checkpoint protein MAD2B, SULFATE ION, Shieldin complex subunit 3 著者 Zhang, F, Dai, Y. 登録日 2019-05-05 公開日 2019-12-11 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Structural basis for shieldin complex subunit 3-mediated recruitment of the checkpoint protein REV7 during DNA double-strand break repair. J.Biol.Chem., 295, 2020

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