Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5TF0
DownloadVisualize
BU of 5tf0 by Molmil
Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis
Descriptor: 1,2-ETHANEDIOL, Glycosyl hydrolase family 3 N-terminal domain protein, MAGNESIUM ION
Authors:Kim, Y, Hatzos-Skintges, C, Endres, M, Babnigg, G, Joachimiak, A, MCSG, Midwest Center for Structural Genomics (MCSG)
Deposit date:2016-09-23
Release date:2016-10-05
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.2021 Å)
Cite:Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis
To Be Published, 2016
6I2S
DownloadVisualize
BU of 6i2s by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD (R802A) in complex with GarA, following 2-oxoglutarate soak
Descriptor: (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid, CALCIUM ION, Glycogen accumulation regulator GarA, ...
Authors:Wagner, T, Bellinzoni, M, Alzari, P.M.
Deposit date:2018-11-01
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the functional versatility of an FHA domain protein in mycobacterial signaling.
Sci.Signal., 12, 2019
5T04
DownloadVisualize
BU of 5t04 by Molmil
STRUCTURE OF CONSTITUTIVELY ACTIVE NEUROTENSIN RECEPTOR
Descriptor: 3,3',3''-phosphanetriyltripropanoic acid, ARG-ARG-PRO-TYR-ILE-LEU, DI(HYDROXYETHYL)ETHER, ...
Authors:Krumm, B, Botos, I, Grisshammer, R.
Deposit date:2016-08-15
Release date:2016-12-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure and dynamics of a constitutively active neurotensin receptor.
Sci Rep, 6, 2016
1W0T
DownloadVisualize
BU of 1w0t by Molmil
hTRF1 DNA-binding domain in complex with telomeric DNA.
Descriptor: 5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*GP*TP *TP*AP*GP*GP*GP*TP*TP*AP*G)-3', 5'-D(*TP*CP*TP*AP*AP*CP*CP*CP*TP*AP *AP*CP*CP*CP*TP*AP*AP*CP*A)-3', TELOMERIC REPEAT BINDING FACTOR 1
Authors:Court, R.I, Chapman, L.M, Fairall, L, Rhodes, D.
Deposit date:2004-06-11
Release date:2004-12-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:How the Human Telomeric Proteins Trf1 and Trf2 Recognize Telomeric DNA: A View from High-Resolution Crystal Structures
Embo Rep., 6, 2005
5LYT
DownloadVisualize
BU of 5lyt by Molmil
COMPARISON OF RADIATION-INDUCED DECAY AND STRUCTURE REFINEMENT FROM X-RAY DATA COLLECTED FROM LYSOZYME CRYSTALS AT LOW AND AMBIENT TEMPERATURES
Descriptor: HEN EGG WHITE LYSOZYME
Authors:Dewan, J.C, Young, A.C.M, Tilton, R.F.
Deposit date:1992-03-20
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparison of Radiation-Induced Decay and Structure Refinement from X-Ray Data Collected from Lysozyme Crystals at Low and Ambient Temperatures
J.Appl.Crystallogr., 26, 1993
5LYZ
DownloadVisualize
BU of 5lyz by Molmil
Real-space refinement of the structure of hen egg-white lysozyme
Descriptor: HEN EGG WHITE LYSOZYME
Authors:Diamond, R, Phillips, D.C, Blake, C.C.F, North, A.C.T.
Deposit date:1975-02-01
Release date:1977-04-12
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Real-space refinement of the structure of hen egg-white lysozyme.
J.Mol.Biol., 82, 1974
5T3P
DownloadVisualize
BU of 5t3p by Molmil
Crystal structure of Human Peroxisomal coenzyme A diphosphatase NUDT7
Descriptor: 1,2-ETHANEDIOL, Peroxisomal coenzyme A diphosphatase NUDT7
Authors:Srikannathasan, V, Nunez, C.A, Tallant, C, Siejka, P, Mathea, S, Kopec, J, Elkins, J.M, Burgess-Brown, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Huber, K.
Deposit date:2016-08-26
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of Human Peroxisomal coenzyme A diphosphatase NUDT7
To Be Published
6IBR
DownloadVisualize
BU of 6ibr by Molmil
Crystal structure of human alpha-galactosidase A in complex with alpha-galactose configured cyclophellitol epoxide LWA481
Descriptor: (2~{R},3~{S},4~{S},5~{R},6~{S})-5-(hydroxymethyl)-7-oxabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Rowland, R.J, Wu, L, Davies, G.J.
Deposit date:2018-11-30
Release date:2019-10-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Alpha-d-Gal-cyclophellitol cyclosulfamidate is a Michaelis complex analog that stabilizes therapeutic lysosomal alpha-galactosidase A in Fabry disease
Chem Sci, 2019
1B76
DownloadVisualize
BU of 1b76 by Molmil
GLYCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Glycine--tRNA ligase
Authors:Arnez, J.G, Moras, D.
Deposit date:1999-01-27
Release date:1999-01-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Glycyl-tRNA synthetase uses a negatively charged pit for specific recognition and activation of glycine.
J.Mol.Biol., 286, 1999
4JXT
DownloadVisualize
BU of 4jxt by Molmil
CID of human RPRD1A in complex with a phosphorylated peptide from RPB1-CTD
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Regulation of nuclear pre-mRNA domain-containing protein 1A, UNKNOWN ATOM OR ION
Authors:Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
Deposit date:2013-03-28
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014
8HTY
DownloadVisualize
BU of 8hty by Molmil
Candida boidinii Formate Dehydrogenase Crystal Structure at 1.4 Angstrom Resolution
Descriptor: Formate dehydrogenase, SULFATE ION
Authors:Gul, M, Yuksel, B, Bulut, H, DeMirci, H.
Deposit date:2022-12-22
Release date:2023-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural analysis of wild-type and Val120Thr mutant Candida boidinii formate dehydrogenase by X-ray crystallography.
Acta Crystallogr D Struct Biol, 79, 2023
1W8X
DownloadVisualize
BU of 1w8x by Molmil
Structural analysis of PRD1
Descriptor: MAJOR CAPSID PROTEIN (PROTEIN P3), PROTEIN P16, PROTEIN P30, ...
Authors:Abrescia, N.G.A, Cockburn, J.J.B, Grimes, J.M, Sutton, G.C, Diprose, J.M, Butcher, S.J, Fuller, S.D, San Martin, C, Burnett, R.M, Stuart, D.I, Bamford, D.H, Bamford, J.K.H.
Deposit date:2004-10-01
Release date:2004-11-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Insights Into Assembly from Structural Analysis of Bacteriophage Prd1.
Nature, 432, 2004
5T5T
DownloadVisualize
BU of 5t5t by Molmil
AMPK bound to allosteric activator
Descriptor: 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, 5'-AMP-activated protein kinase subunit gamma-1, ...
Authors:Calabrese, M.F, Kurumbail, R.G.
Deposit date:2016-08-31
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.46 Å)
Cite:Selective Activation of AMPK beta 1-Containing Isoforms Improves Kidney Function in a Rat Model of Diabetic Nephropathy.
J. Pharmacol. Exp. Ther., 361, 2017
7MWA
DownloadVisualize
BU of 7mwa by Molmil
Crystal structure of 2-octaprenyl-6-methoxyphenol hydroxylase UbiH from Acinetobacter baumannii, apoenzyme
Descriptor: 1,2-ETHANEDIOL, 2-polyprenyl-6-methoxyphenol 4-hydroxylase, CHLORIDE ION, ...
Authors:Stogios, P.J, Evdokimova, E, Endres, M, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-05-16
Release date:2021-05-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:UbiH from Acinetobacter baumannii
To Be Published
5NGK
DownloadVisualize
BU of 5ngk by Molmil
The endo-beta1,6-glucanase BT3312
Descriptor: Glucosylceramidase
Authors:Basle, A, Temple, M, Cuskin, F, Lowe, E, Gilbert, H.
Deposit date:2017-03-17
Release date:2017-05-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Bacteroidetes locus dedicated to fungal 1,6-beta-glucan degradation: Unique substrate conformation drives specificity of the key endo-1,6-beta-glucanase.
J. Biol. Chem., 292, 2017
7NHQ
DownloadVisualize
BU of 7nhq by Molmil
Structure of PSII-I prime (PSII with Psb28, and Psb34)
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE, ...
Authors:Zabret, J, Bohn, S, Schuller, S.K, Arnolds, O, Chan, A, Tajkhorshid, E, Stoll, R, Engel, B.D, Rudack, T, Schuller, J.M, Nowaczyk, M.M.
Deposit date:2021-02-11
Release date:2021-05-05
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Structural insights into photosystem II assembly.
Nat.Plants, 7, 2021
8I7L
DownloadVisualize
BU of 8i7l by Molmil
Crystal structure of indoleamine 2,3-dioxygenagse 1 (IDO1) complexed with a novel inhibitor
Descriptor: 1-[3-[(4-chloranyl-2-fluoranyl-phenyl)carbamoylamino]-4-[cyclohexyl(2-methylpropyl)amino]phenyl]pyrrole-2-carboxylic acid, Indoleamine 2,3-dioxygenase 1, THIOSULFATE
Authors:Li, K, Liu, W, Dong, X.
Deposit date:2023-02-01
Release date:2023-02-15
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Apo-Form Selective Inhibition of IDO for Tumor Immunotherapy.
J Immunol., 209, 2022
1VGO
DownloadVisualize
BU of 1vgo by Molmil
Crystal Structure of Archaerhodopsin-2
Descriptor: Archaerhodopsin 2, RETINAL, SULFATE ION, ...
Authors:Yoshimura, K, Enami, N, Murakami, M, Okumura, H, Ihara, K, Kouyama, T.
Deposit date:2004-04-28
Release date:2005-10-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of archaerhodopsin-1 and -2: Common structural motif in archaeal light-driven proton pumps
J.Mol.Biol., 358, 2006
1CGE
DownloadVisualize
BU of 1cge by Molmil
CRYSTAL STRUCTURES OF RECOMBINANT 19-KDA HUMAN FIBROBLAST COLLAGENASE COMPLEXED TO ITSELF
Descriptor: CALCIUM ION, FIBROBLAST COLLAGENASE, ZINC ION
Authors:Lovejoy, B, Hassell, A.M, Luther, M.A, Weigl, D, Jordan, S.R.
Deposit date:1994-02-03
Release date:1995-03-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of recombinant 19-kDa human fibroblast collagenase complexed to itself.
Biochemistry, 33, 1994
5T5Q
DownloadVisualize
BU of 5t5q by Molmil
Crystal structure of Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase from Brucella melitensis
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-08-31
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase from Brucella melitensis
to be published
3BS1
DownloadVisualize
BU of 3bs1 by Molmil
Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with a Novel Mode of Binding
Descriptor: Accessory gene regulator protein A, DNA (5'-D(*DAP*DAP*(BRU)P*DAP*DCP*DTP*DTP*DAP*DAP*DCP*DTP*DGP*DTP*DTP*DAP*DA)-3'), DNA (5'-D(*DTP*DTP*DTP*DAP*DAP*DCP*DAP*DGP*DTP*DTP*DAP*DAP*DGP*(BRU)P*DAP*DT)-3'), ...
Authors:Sidote, D.J, Barbieri, C, Wu, T, Stock, A.M.
Deposit date:2007-12-21
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of the Staphylococcus aureus AgrA LytTR Domain Bound to DNA Reveals a Beta Fold with an Unusual Mode of Binding.
Structure, 16, 2008
8F5W
DownloadVisualize
BU of 8f5w by Molmil
Dihydropyrimidine Dehydrogenase (DPD) C671S Mutant Soaked with Dihydrothymine and NADPH Quasi-Anaerobically
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, Dihydropyrimidine dehydrogenase [NADP(+)], FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Kaley, N, Smith, M, Forouzesh, D, Liu, D, Moran, G.
Deposit date:2022-11-15
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Mammalian dihydropyrimidine dehydrogenase: Added mechanistic details from transient-state analysis of charge transfer complexes.
Arch.Biochem.Biophys., 736, 2023
8EYO
DownloadVisualize
BU of 8eyo by Molmil
Crystal Structure of Human Mitochondrial NADP+ Malic Enzyme 3 with NADP bound
Descriptor: CITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-dependent malic enzyme, ...
Authors:Shaffer, P.L, Grell, T.A.J, Mason, M, Thompson, A.A, Riley, D, Wagner, M.V, Steele, R, Ortiz-Meoz, R, Wadia, J, Sharma, S, Yu, X.
Deposit date:2022-10-28
Release date:2023-02-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Integrative structural and functional analysis of human malic enzyme 3: A potential therapeutic target for pancreatic cancer.
Heliyon, 8, 2022
5NJM
DownloadVisualize
BU of 5njm by Molmil
Lysozyme room-temperature structure determined by serial millisecond crystallography
Descriptor: Lysozyme C
Authors:Weinert, T, Vera, L, Marsh, M, James, D, Gashi, D, Nogly, P, Jaeger, K, Standfuss, J.
Deposit date:2017-03-29
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons.
Nat Commun, 8, 2017
5NJQ
DownloadVisualize
BU of 5njq by Molmil
Mix-and-diffuse serial synchrotron crystallography: structure of N,N',N''-Triacetylchitotriose bound to Lysozyme with 1s time-delay, phased with 4ET8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Lysozyme C, ...
Authors:Oberthuer, D, Meents, A, Beyerlein, K.R, Chapman, H.N, Lieseke, J.
Deposit date:2017-03-29
Release date:2017-10-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mix-and-diffuse serial synchrotron crystallography.
IUCrJ, 4, 2017

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon