Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7FH0
DownloadVisualize
BU of 7fh0 by Molmil
Crystallographic structure of two neutralizing nanobodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Zheng, P, Jin, J.
Deposit date:2021-07-28
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Hetero-bivalent nanobodies provide broad-spectrum protection against SARS-CoV-2 variants of concern including Omicron.
Cell Res., 32, 2022
6X2O
DownloadVisualize
BU of 6x2o by Molmil
Crystal Structure of unliganded CRM1(E571K)-Ran-RanBP1
Descriptor: Exportin-1, GTP-binding nuclear protein Ran, MAGNESIUM ION, ...
Authors:Baumhardt, J.M.
Deposit date:2020-05-20
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:Recognition of nuclear export signals by CRM1 carrying the oncogenic E571K mutation.
Mol.Biol.Cell, 31, 2020
6E18
DownloadVisualize
BU of 6e18 by Molmil
Crystal structure of Chlamydomonas reinhardtii HAP2 ectodomain provides structural insights of functional loops in green algae.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Baquero, E, Legrand, P, Rey, F.A.
Deposit date:2018-07-09
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Species-Specific Functional Regions of the Green Alga Gamete Fusion Protein HAP2 Revealed by Structural Studies.
Structure, 27, 2019
8AYF
DownloadVisualize
BU of 8ayf by Molmil
Crystal structure of human Sphingosine-1-phosphate lyase 1
Descriptor: ACETATE ION, GLYCEROL, Sphingosine-1-phosphate lyase 1
Authors:Giardina, G, Catalano, F, Pampalone, G, Cellini, B.
Deposit date:2022-09-02
Release date:2023-09-13
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Dual species sphingosine-1-phosphate lyase inhibitors to combine antifungal and anti-inflammatory activities in cystic fibrosis: a feasibility study.
Sci Rep, 13, 2023
8ALV
DownloadVisualize
BU of 8alv by Molmil
Small molecular stabilizer for ERalpha and 14-3-3 (1076403)
Descriptor: 14-3-3 protein sigma, 2-chloranyl-N-[[1-[1-[(4-chlorophenyl)amino]cyclohexyl]carbonylpiperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
Authors:Visser, E.J, Vandenboorn, E.M.F, Ottmann, C.
Deposit date:2022-08-01
Release date:2023-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8AYT
DownloadVisualize
BU of 8ayt by Molmil
Crystal structure of SUDV VP40 W95A mutant
Descriptor: Matrix protein VP40
Authors:Werner, A.-D, Steinchen, W, Werel, L, Kowalski, K, Essen, L.-O, Becker, S.
Deposit date:2022-09-03
Release date:2023-09-13
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of SUDV VP40 W95A mutant
To Be Published
8AI0
DownloadVisualize
BU of 8ai0 by Molmil
Small molecular stabilizer for ERalpha and 14-3-3sigma (1080268)
Descriptor: 14-3-3 protein sigma, 2-chloranyl-N-[[1-(2-methyl-2-phenylazanyl-propanoyl)piperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
Authors:Visser, E.J, Vandenboorn, E.M.F, Ottmann, C.
Deposit date:2022-07-25
Release date:2023-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8ARX
DownloadVisualize
BU of 8arx by Molmil
Small molecular stabilizer for ERalpha and 14-3-3sigma (1074378)
Descriptor: 14-3-3 protein sigma, 2-chloranyl-N-[[1-[1-(4-chloranylphenoxy)cyclopropyl]carbonylpiperidin-4-yl]methyl]ethanamide, Estrogen receptor, ...
Authors:Visser, E.J, Vandenboorn, E.M.F, Ottmann, C.
Deposit date:2022-08-17
Release date:2023-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-Based Optimization of Covalent, Small-Molecule Stabilizers of the 14-3-3 sigma /ER alpha Protein-Protein Interaction from Nonselective Fragments.
J.Am.Chem.Soc., 145, 2023
8AZF
DownloadVisualize
BU of 8azf by Molmil
Crystal structure of K449E variant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with adenosine
Descriptor: ADENOSINE, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Arning, A, Malecki, P, Wozniak, K, Brzezinski, K.
Deposit date:2022-09-06
Release date:2023-09-13
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Crystal structure of K449E variant of S-adenosyl-L-homocysteine hydrolase from Pseudomonas aeruginosa in complex with adenosine
To Be Published
7EXJ
DownloadVisualize
BU of 7exj by Molmil
Crystal structure of alkaline alpha-galctosidase D383A mutant from Arabidopsis thaliana complexed with Raffinose
Descriptor: Probable galactinol--sucrose galactosyltransferase 6, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
Deposit date:2021-05-27
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
7EXR
DownloadVisualize
BU of 7exr by Molmil
Crystal structure of alkaline alpha-galactosidase D383A mutant from Arabidopsis thaliana complexed with Stachyose.
Descriptor: Probable galactinol--sucrose galactosyltransferase 6, alpha-D-galactopyranose-(1-6)-alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
Deposit date:2021-05-28
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
7EXQ
DownloadVisualize
BU of 7exq by Molmil
Crystal structure of alkaline alpha-galactosidase D383A mutant from Arabidopsis thaliana complexed with product-galactose and sucrose.
Descriptor: Probable galactinol--sucrose galactosyltransferase 6, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, beta-D-galactopyranose
Authors:Chuankhayan, P, Guan, H.H, Lin, C.C, Chen, N.C, Huang, Y.C, Yoshimura, M, Nakagawa, A, Lee, R.H, Chen, C.J.
Deposit date:2021-05-28
Release date:2022-11-30
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insight into the hydrolase and synthase activities of an alkaline alpha-galactosidase from Arabidopsis from complexes with substrate/product.
Acta Crystallogr D Struct Biol, 79, 2023
8AHY
DownloadVisualize
BU of 8ahy by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-07-25
Release date:2023-12-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
8OFR
DownloadVisualize
BU of 8ofr by Molmil
Human adenovirus type 25 fiber-knob protein complexed with sialic acid
Descriptor: Fiber, N-acetyl-beta-neuraminic acid
Authors:Rizkallah, P.J, Parker, A.L, Mundy, R.M, Baker, A.T.
Deposit date:2023-03-16
Release date:2023-09-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus.
Npj Viruses, 1, 2023
8ALM
DownloadVisualize
BU of 8alm by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-08-01
Release date:2023-12-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85402 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
8ALH
DownloadVisualize
BU of 8alh by Molmil
X-ray structure of human NCS-1 bound to Ric-8A
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Munoz-Reyes, D, Sanchez-Barrena, M.J.
Deposit date:2022-08-01
Release date:2023-12-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the G alpha chaperone and GEF Ric-8A.
Elife, 12, 2023
8B20
DownloadVisualize
BU of 8b20 by Molmil
NDM-1 metallo-beta-lactamase in complex with triazole-based inhibitor CP57
Descriptor: 1,2-ETHANEDIOL, 2-[(~{E})-[3-sulfanyl-5-[4-(trifluoromethyl)phenyl]-1,2,4-triazol-4-yl]iminomethyl]benzoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Vascon, F, Lazzarato, L, Bersani, M, Gianquinto, E, Docquier, J.D, Spyrakis, F, Tondi, D, Cendron, L.
Deposit date:2022-09-12
Release date:2023-12-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure-Based Optimization of 1,2,4-Triazole-3-Thione Derivatives: Improving Inhibition of NDM-/VIM-Type Metallo-beta-Lactamases and Synergistic Activity on Resistant Bacteria.
Pharmaceuticals, 16, 2023
8OFS
DownloadVisualize
BU of 8ofs by Molmil
Human adenovirus type 30 fiber-knob protein complexed with sialic acid
Descriptor: Fiber, N-acetyl-beta-neuraminic acid
Authors:Rizkallah, P.J, Parker, A.L, Mundy, R.M, Baker, A.T.
Deposit date:2023-03-16
Release date:2023-09-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus.
Npj Viruses, 1, 2023
8B1W
DownloadVisualize
BU of 8b1w by Molmil
NDM-1 metallo-beta-lactamase in complex with triazole-based inhibitor CP35
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-[(~{E})-(3-bromophenyl)methylideneamino]-5-(trifluoromethyl)-1,2,4-triazole-3-thiol, ...
Authors:Vascon, F, Lazzarato, L, Bersani, M, Gianquinto, E, Docquier, J.D, Spyrakis, F, Tondi, D, Cendron, L.
Deposit date:2022-09-12
Release date:2023-12-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Based Optimization of 1,2,4-Triazole-3-Thione Derivatives: Improving Inhibition of NDM-/VIM-Type Metallo-beta-Lactamases and Synergistic Activity on Resistant Bacteria.
Pharmaceuticals, 16, 2023
6H15
DownloadVisualize
BU of 6h15 by Molmil
Structure of LRP6 P3E3P4E4 in complex with VHH L-P2-B10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Gros, P, van Scherpenzeel, R.C.
Deposit date:2018-07-11
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Anti-LRP5/6 VHHs promote differentiation of Wnt-hypersensitive intestinal stem cells.
Nat Commun, 10, 2019
6X2Y
DownloadVisualize
BU of 6x2y by Molmil
Crystal Structure of mDia2NES peptide bound to CRM1(E571K)
Descriptor: 1,2-ETHANEDIOL, Exportin-1, GLYCEROL, ...
Authors:Baumhardt, J.M.
Deposit date:2020-05-21
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Recognition of nuclear export signals by CRM1 carrying the oncogenic E571K mutation.
Mol.Biol.Cell, 31, 2020
4Q68
DownloadVisualize
BU of 4q68 by Molmil
Crystal structure of a N-acetylmuramoyl-L-alanine amidase (BACUNI_02947) from Bacteroides uniformis ATCC 8492 at 1.07 A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-04-21
Release date:2014-05-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Structure-guided functional characterization of DUF1460 reveals a highly specific NlpC/P60 amidase family.
Structure, 22, 2014
8AM3
DownloadVisualize
BU of 8am3 by Molmil
Cyclohexanone dehydrogenase (CDH) from Alicycliphilus denitrificans K601 - wildtype
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Fumarate reductase/succinate dehydrogenase flavoprotein domain protein, GLYCEROL, ...
Authors:Prior, S.H, Taylor, E.J.
Deposit date:2022-08-02
Release date:2024-02-14
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Rational design of a cyclohexanone dehydrogenase for enhanced alpha , beta-desaturation and substrate specificity.
Chem Sci, 15, 2024
8AM8
DownloadVisualize
BU of 8am8 by Molmil
Cyclohexanone dehydrogenase (CDH) from Alicycliphilus denitrificans K601 complexed with dehydrogenated substrate - W113A mutant
Descriptor: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, Fumarate reductase/succinate dehydrogenase flavoprotein domain protein, ...
Authors:Prior, S.H, Taylor, E.J.
Deposit date:2022-08-03
Release date:2024-02-14
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Rational design of a cyclohexanone dehydrogenase for enhanced alpha , beta-desaturation and substrate specificity.
Chem Sci, 15, 2024
6X2R
DownloadVisualize
BU of 6x2r by Molmil
Crystal Structure of the 4E-TNES peptide bound to CRM1
Descriptor: Eukaryotic translation initiation factor 4E transporter, Exportin-1, GLYCEROL, ...
Authors:Baumhardt, J.M.
Deposit date:2020-05-20
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:Recognition of nuclear export signals by CRM1 carrying the oncogenic E571K mutation.
Mol.Biol.Cell, 31, 2020

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon