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3GFC
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BU of 3gfc by Molmil
Crystal Structure of Histone-binding protein RBBP4
Descriptor: Histone-binding protein RBBP4
Authors:Amaya, M.F, Dong, A, Li, Z, He, H, Ni, S, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
Deposit date:2009-02-26
Release date:2009-04-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of WD40 domain proteins.
Protein Cell, 2, 2011
3GFM
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BU of 3gfm by Molmil
Crystal structure of the ST1710 mutant (K91A) protein
Descriptor: 146aa long hypothetical transcriptional regulator, CALCIUM ION
Authors:Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-02-27
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GG8
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BU of 3gg8 by Molmil
Crystal structure of the Toxoplasma gondii Pyruvate Kinase N terminal truncated
Descriptor: GLYCEROL, Pyruvate kinase, SULFATE ION
Authors:Wernimont, A.K, Lew, J, Allali-Hassani, A, Vedadi, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Hills, T, Schapira, M, Hui, R, Pizarro, J.C, Structural Genomics Consortium (SGC)
Deposit date:2009-02-27
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:The crystal structure of Toxoplasma gondii pyruvate kinase 1.
Plos One, 5, 2010
3GIS
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BU of 3gis by Molmil
Crystal Structure of Na-free Thrombin in Complex with Thrombomodulin
Descriptor: CALCIUM ION, Prothrombin, SULFATE ION, ...
Authors:Adams, T.E, Huntington, J.A.
Deposit date:2009-03-06
Release date:2009-08-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis of thrombomodulin activation of slow thrombin
J.Thromb.Haemost., 7, 2009
3GCQ
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BU of 3gcq by Molmil
Human P38 MAP kinase in complex with RL45
Descriptor: 1-{4-[(6-aminoquinazolin-4-yl)amino]phenyl}-3-[3-tert-butyl-1-(3-methylphenyl)-1H-pyrazol-5-yl]urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2009-02-22
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of a fluorescent-tagged kinase assay system for the detection and characterization of allosteric kinase inhibitors.
J.Am.Chem.Soc., 131, 2009
3GDP
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BU of 3gdp by Molmil
Hydroxynitrile lyase from almond, monoclinic crystal form
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Dreveny, I, Gruber, K, Kratky, C.
Deposit date:2009-02-24
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Substrate binding in the FAD-dependent hydroxynitrile lyase from almond provides insight into the mechanism of cyanohydrin formation and explains the absence of dehydrogenation activity.
Biochemistry, 48, 2009
3GF3
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BU of 3gf3 by Molmil
Glutaconyl-coA decarboxylase A subunit from Clostridium symbiosum co-crystallized with glutaconyl-coA
Descriptor: CHLORIDE ION, CROTONYL COENZYME A, Glutaconyl-CoA decarboxylase subunit A
Authors:Kress, D, Brugel, D, Buckel, W, Essen, L.-O.
Deposit date:2009-02-26
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases
J.Biol.Chem., 284, 2009
3GG3
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BU of 3gg3 by Molmil
Crystal Structure of the Bromodomain of Human PCAF
Descriptor: CHLORIDE ION, Histone acetyltransferase PCAF
Authors:Filippakopoulos, P, Keates, T, Picaud, S, Rehana, K, Fedorov, O, Ugochukwu, E, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2009-02-27
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Histone recognition and large-scale structural analysis of the human bromodomain family.
Cell(Cambridge,Mass.), 149, 2012
3GK2
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BU of 3gk2 by Molmil
X-ray structure of bovine SBi279,Ca(2+)-S100B
Descriptor: (Z)-2-[2-(4-methylpiperazin-1-yl)benzyl]diazenecarbothioamide, CACODYLATE ION, CALCIUM ION, ...
Authors:Charpentier, T.H, Weber, D.J, Toth, E.A.
Deposit date:2009-03-09
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography.
Biochemistry, 48, 2009
3GK4
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BU of 3gk4 by Molmil
X-ray structure of bovine SBi523,Ca(2+)-S100B
Descriptor: CALCIUM ION, Protein S100-B, ethyl 5-{[(1R)-1-(ethoxycarbonyl)-2-oxopropyl]sulfanyl}-1,2-dihydro[1,2,3]triazolo[1,5-a]quinazoline-3-carboxylate
Authors:Charpentier, T.H, Weber, D.J, Toth, E.A.
Deposit date:2009-03-09
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography.
Biochemistry, 48, 2009
3GKA
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BU of 3gka by Molmil
Crystal structure of N-ethylmaleimidine reductase from Burkholderia pseudomallei
Descriptor: FLAVIN MONONUCLEOTIDE, N-ethylmaleimide reductase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-03-10
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of N-ethylmaleimidine reductase from Burkholderia pseudomallei
To be Published
3GLC
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BU of 3glc by Molmil
Crystal Structure of E. coli LsrF in complex with Ribose-5-phosphate
Descriptor: Aldolase lsrF, RIBOSE-5-PHOSPHATE
Authors:Miller, S.T, Diaz, Z.C.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
Plos One, 4, 2009
3GK1
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BU of 3gk1 by Molmil
X-ray structure of bovine SBi132,Ca(2+)-S100B
Descriptor: 2-[(5-hex-1-yn-1-ylfuran-2-yl)carbonyl]-N-methylhydrazinecarbothioamide, CACODYLATE ION, CALCIUM ION, ...
Authors:Charpentier, T.H, Weber, D.J, Toth, E.A.
Deposit date:2009-03-09
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Small molecules bound to unique sites in the target protein binding cleft of calcium-bound S100B as characterized by nuclear magnetic resonance and X-ray crystallography.
Biochemistry, 48, 2009
3GKF
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BU of 3gkf by Molmil
Crystal Structure of E. coli LsrF
Descriptor: Aldolase lsrF
Authors:Miller, S.T, Diaz, Z.C.
Deposit date:2009-03-10
Release date:2009-09-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of the Escherichia coli autoinducer-2 processing protein LsrF.
Plos One, 4, 2009
3GMA
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BU of 3gma by Molmil
Glutaconyl-coA decarboxylase A subunit from Clostridium symbiosum co-crystallized with glutaryl-CoA
Descriptor: Glutaconyl-CoA decarboxylase subunit A, glutaryl-coenzyme A
Authors:Kress, D, Brugel, D, Buckel, W, Essen, L.-O.
Deposit date:2009-03-13
Release date:2009-07-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An asymmetric model for Na+-translocating glutaconyl-CoA decarboxylases
J.Biol.Chem., 284, 2009
3GPG
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BU of 3gpg by Molmil
Crystal structure of macro domain of Chikungunya virus
Descriptor: Non-structural protein 3
Authors:Malet, H, Jamal, S, Coutard, B, Canard, B.
Deposit date:2009-03-23
Release date:2009-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket
J.Virol., 83, 2009
3GPP
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BU of 3gpp by Molmil
MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-T224P complex
Descriptor: DNA (5'-D(P*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*C)-3'), DNA (5'-D(P*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*C)-3'), DNA glycosylase, ...
Authors:Spong, M.C, Qi, Y, Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3GN6
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BU of 3gn6 by Molmil
Crystal structure of CT0912, ORFan protein from Chlorobium tepidum with a ferredoxin-like domain repeat (NP_661805.1) from CHLOROBIUM TEPIDUM TLS at 1.80 A resolution
Descriptor: CT0912, ORFan protein with a ferredoxin-like domain repeat, DI(HYDROXYETHYL)ETHER, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-03-16
Release date:2009-03-31
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of CT0912, ORFan protein from Chlorobium tepidum with a ferredoxin-like domain repeat (NP_661805.1) from CHLOROBIUM TEPIDUM TLS at 1.80 A resolution
To be published
3GPY
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BU of 3gpy by Molmil
Sequence-matched MutM Lesion Recognition Complex 3 (LRC3)
Descriptor: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*T*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ...
Authors:Qi, Y, Verdine, G.L.
Deposit date:2009-03-23
Release date:2009-11-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme.
Nature, 462, 2009
3GNQ
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BU of 3gnq by Molmil
Crystal structure of glyceraldehyde-3-phosphate dehydrogenase, type I from Burkholderia pseudomallei
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, type I, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-03-17
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of glyceraldehyde-3-phosphate dehydrogenase, type I from Burkholderia pseudomallei
TO BE PUBLISHED
3GPI
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BU of 3gpi by Molmil
Structure of putative NAD-dependent epimerase/dehydratase from methylobacillus flagellatus
Descriptor: 1,2-ETHANEDIOL, NAD-dependent epimerase/dehydratase
Authors:Ramagopal, U.A, Morano, C, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-23
Release date:2009-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Structure of putative NAD-dependent epimerase/dehydratase from methylobacillus flagellatus
To be published
3H4Q
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BU of 3h4q by Molmil
Crystal structure of putative acetyltransferase (NP_371943.1) from STAPHYLOCOCCUS AUREUS MU50 at 2.50 A resolution
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, UNKNOWN LIGAND, putative acetyltransferase
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-04-20
Release date:2009-05-05
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of putative acetyltransferase (NP_371943.1) from STAPHYLOCOCCUS AUREUS MU50 at 2.50 A resolution
To be published
3H4W
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BU of 3h4w by Molmil
Structure of a Ca+2 dependent Phosphatidylinositol-specific phospholipase C (PI-PLC) Enzyme from Streptomyces antibioticus
Descriptor: ACETYL GROUP, CHLORIDE ION, ETHANOL, ...
Authors:Jackson, M.R, Selby, T.L.
Deposit date:2009-04-21
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of a Ca2+-dependent PI-PLC
To be Published
3H7K
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BU of 3h7k by Molmil
Crystal Structure of Arabidopsis thaliana Agmatine Deiminase Complexed with a Covalently Bound Reaction Intermediate
Descriptor: Agmatine deiminase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Burgie, E.S, Bingman, C.A, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2009-04-27
Release date:2009-05-26
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural Insights into the Catalytic Mechanism of Arabidopsis thaliana Agmatine Deiminase
to be published
3H8O
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BU of 3h8o by Molmil
Structure determination of DNA methylation lesions N1-meA and N3-meC in duplex DNA using a cross-linked host-guest system
Descriptor: 5'-D(*CP*TP*GP*TP*AP*TP*(2YR)P*AP*TP*(MA7)P*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*TP*AP*TP*AP*AP*TP*AP*CP*A)-3', Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, ...
Authors:Lu, L, Yi, C, Jian, X, Zheng, Q.
Deposit date:2009-04-29
Release date:2010-03-31
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure determination of DNA methylation lesions N1-meA and N3-meC in duplex DNA using a cross-linked protein-DNA system.
Nucleic Acids Res., 38, 2010

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PDB entries from 2024-08-28

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