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8OYV
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BU of 8oyv by Molmil
De novo designed Claudin fold CLF_4
Descriptor: De novo designed soluble Claudin
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8OYX
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BU of 8oyx by Molmil
De novo designed soluble GPCR-like fold GLF_18
Descriptor: De novo designed soluble GPCR-like protein, PHOSPHATE ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8P1B
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BU of 8p1b by Molmil
Lysozyme structure solved from serial crystallography data collected at 2 kHz with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
8OYY
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BU of 8oyy by Molmil
De novo designed soluble GPCR-like fold GLF_32
Descriptor: CHLORIDE ION, De novo designed soluble GPCR-like protein, POTASSIUM ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8P1C
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BU of 8p1c by Molmil
Lysozyme structure solved from serial crystallography data collected at 1 kHz with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
8OYW
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BU of 8oyw by Molmil
De novo designed rhomboid protease-like fold RPF_9
Descriptor: De novo designed soluble Rhomboid protease-like protein, SODIUM ION
Authors:Pacesa, M, Correia, B.E.
Deposit date:2023-05-05
Release date:2023-10-18
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Computational design of soluble and functional membrane protein analogues.
Nature, 631, 2024
8OJN
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BU of 8ojn by Molmil
Structure of the C-terminal beta helix domain of the Bdellovibrio bacteriovorus Bd3182 fibre
Descriptor: Cell wall surface anchor family protein
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-03-24
Release date:2023-10-25
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Bdellovibrio bacteriovorus uses chimeric fibre proteins to recognize and invade a broad range of bacterial hosts.
Nat Microbiol, 9, 2024
7U51
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BU of 7u51 by Molmil
Nucleosome core particle with AP-site at SHL-6
Descriptor: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
Authors:Freudenthal, B.D, Weaver, T.M.
Deposit date:2022-03-01
Release date:2022-09-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for APE1 processing DNA damage in the nucleosome.
Nat Commun, 13, 2022
8P1A
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BU of 8p1a by Molmil
Lysozyme structure solved from serial crystallography data collected at 2 kHz for 5 seconds with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
8P1D
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BU of 8p1d by Molmil
Lysozyme structure solved from serial crystallography data collected at 100 Hz with JUNGFRAU detector at MAXIV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Nan, J, Leonarski, F, Furrer, A, Dworkowski, F.
Deposit date:2023-05-11
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Kilohertz serial crystallography with the JUNGFRAU detector at a fourth-generation synchrotron source.
Iucrj, 10, 2023
7U50
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BU of 7u50 by Molmil
APE1 bound to a nucleosome core particle with AP-site at SHL-6
Descriptor: DNA (144-MER), DNA (145-MER), DNA-(apurinic or apyrimidinic site) endonuclease, ...
Authors:Weaver, T.M, Freudenthal, B.D.
Deposit date:2022-03-01
Release date:2022-09-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for APE1 processing DNA damage in the nucleosome.
Nat Commun, 13, 2022
7U52
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BU of 7u52 by Molmil
nucleosome core particle with AP-site at SHL-6.5
Descriptor: DNA (145-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
Authors:Freudenthal, B.D, Weaver, T.M.
Deposit date:2022-03-01
Release date:2022-09-07
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for APE1 processing DNA damage in the nucleosome.
Nat Commun, 13, 2022
3AAT
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BU of 3aat by Molmil
ACTIVITY AND STRUCTURE OF THE ACTIVE-SITE MUTANTS R386Y AND R386F OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Danishefsky, A.T, Ringe, D, Petsko, G.A.
Deposit date:1990-12-06
Release date:1992-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Activity and structure of the active-site mutants R386Y and R386F of Escherichia coli aspartate aminotransferase.
Biochemistry, 30, 1991
3ADK
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BU of 3adk by Molmil
REFINED STRUCTURE OF PORCINE CYTOSOLIC ADENYLATE KINASE AT 2.1 ANGSTROMS RESOLUTION
Descriptor: ADENYLATE KINASE, SULFATE ION
Authors:Schulz, G.E.
Deposit date:1987-11-19
Release date:1988-01-16
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Refined structure of porcine cytosolic adenylate kinase at 2.1 A resolution.
J.Mol.Biol., 199, 1988
7EJO
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BU of 7ejo by Molmil
Structure of ERH-2 bound to TOST-1
Descriptor: Enhancer of rudimentary homolog 2, Enhancer of rudimentary homolog 2,Protein tost-1
Authors:Wang, X, Xu, C.
Deposit date:2021-04-02
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.191 Å)
Cite:Molecular basis for PICS-mediated piRNA biogenesis and cell division.
Nat Commun, 12, 2021
2H1V
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BU of 2h1v by Molmil
Crystal structure of the Lys87Ala mutant variant of Bacillus subtilis ferrochelatase
Descriptor: Ferrochelatase, MAGNESIUM ION
Authors:Hansson, M.D, Karlberg, T, Arys Rahardja, M, Al-Karadaghi, S, Hansson, M.
Deposit date:2006-05-17
Release date:2007-01-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Amino Acid Residues His183 and Glu264 in Bacillus subtilis Ferrochelatase Direct and Facilitate the Insertion of Metal Ion into Protoporphyrin IX
Biochemistry, 46, 2007
1REJ
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BU of 1rej by Molmil
Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 1
Descriptor: 3-[(4-HYDROXYBENZOYL)AMINO]AZEPAN-4-YL 4-HYDROXYBENZOATE, cAMP-dependent protein kinase, alpha-catalytic subunit
Authors:Akamine, P, Madhusudan, Brunton, L.L, Ou, H.D, Canaves, J.M, Xuong, N.H, Taylor, S.S.
Deposit date:2003-11-06
Release date:2004-02-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Balanol analogues probe specificity determinants and the conformational malleability of the cyclic 3',5'-adenosine monophosphate-dependent protein kinase catalytic subunit
Biochemistry, 43, 2004
5O3X
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BU of 5o3x by Molmil
Structural characterization of the fast and promiscuous macrocyclase from plant - apo PCY1
Descriptor: CACODYLATE ION, Peptide cyclase 1
Authors:Ludewig, H, Czekster, C.M, Bent, A.F, Naismith, J.H.
Deposit date:2017-05-25
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Characterization of the Fast and Promiscuous Macrocyclase from Plant PCY1 Enables the Use of Simple Substrates.
ACS Chem. Biol., 13, 2018
1W60
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BU of 1w60 by Molmil
NATIVE HUMAN PCNA
Descriptor: PROLIFERATING CELL NUCLEAR ANTIGEN
Authors:Kontopidis, G, Wu, S, Zheleva, D, Taylor, P, Mcinnes, C, Lane, D, Fischer, P, Walkinshaw, M.
Deposit date:2004-08-11
Release date:2005-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural and Biochemical Studies of Human Proliferating Cell Nuclear Antigen Complexes Provide a Rationale for Cyclin Association and Inhibitor Design
Proc.Natl.Acad.Sci.USA, 102, 2005
4AUO
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BU of 4auo by Molmil
Crystal structure of MMP-1(E200A) in complex with a triple-helical collagen peptide
Descriptor: CALCIUM ION, INTERSTITIAL COLLAGENASE, TRIPLE-HELICAL COLLAGEN PEPTIDE, ...
Authors:Manka, S.W, Carafoli, F, Visse, R, Bihan, D, Raynal, N, Farndale, R.W, Murphy, G, Enghild, J.J, Hohenester, E, Nagase, H.
Deposit date:2012-05-18
Release date:2012-07-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights Into Triple-Helical Collagen Cleavage by Matrix Metalloproteinase 1
Proc.Natl.Acad.Sci.USA, 109, 2012
8PW8
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BU of 8pw8 by Molmil
Crystal structure of the human METTL3-METTL14 in complex with a bisubstrate analogue (BA2)
Descriptor: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[2-[[9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-6-yl]amino]ethyl]amino]-2-azanyl-butanoic acid, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Etheve-Quelquejeu, M, Caflisch, A.
Deposit date:2023-07-19
Release date:2023-11-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The catalytic mechanism of the RNA methyltransferase METTL3.
Elife, 12, 2024
1REK
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BU of 1rek by Molmil
Crystal structure of cAMP-dependent protein kinase complexed with balanol analog 8
Descriptor: 3-[(3-SEC-BUTYL-4-HYDROXYBENZOYL)AMINO]AZEPAN-4-YL 4-(2-HYDROXY-5-METHOXYBENZOYL)BENZOATE, PENTANAL, cAMP-dependent protein kinase, ...
Authors:Akamine, P, Madhusudan, Brunton, L.L, Ou, H.D, Canaves, J.M, Xuong, N.H, Taylor, S.S.
Deposit date:2003-11-06
Release date:2004-02-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Balanol analogues probe specificity determinants and the conformational malleability of the cyclic 3',5'-adenosine monophosphate-dependent protein kinase catalytic subunit
Biochemistry, 43, 2004
8PF9
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BU of 8pf9 by Molmil
Galectin-3C in complex with a triazolesulfane derivative
Descriptor: (2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-[4-[oxidanyl(phenyl)-$l^{3}-sulfanyl]-1,2,3-triazol-1-yl]oxan-2-yl]sulfanyl-oxane-3,4,5-triol, Galectin-3, MAGNESIUM ION, ...
Authors:Kumar, R, Mahanti, M, Nilsson, U.J, Logan, D.T.
Deposit date:2023-06-15
Release date:2023-11-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Ligand Sulfur Oxidation State Progressively Alters Galectin-3-Ligand Complex Conformations To Induce Affinity-Influencing Hydrogen Bonds.
J.Med.Chem., 66, 2023
8PBF
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BU of 8pbf by Molmil
Galectin-3C in complex with a triazolesulfane derivative
Descriptor: (2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-(4-phenylsulfanyl-1,2,3-triazol-1-yl)oxan-2-yl]sulfanyl-oxane-3,4,5-triol, Galectin-3, THIOCYANATE ION
Authors:Kumar, R, Mahanti, M.
Deposit date:2023-06-09
Release date:2023-11-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Ligand Sulfur Oxidation State Progressively Alters Galectin-3-Ligand Complex Conformations To Induce Affinity-Influencing Hydrogen Bonds.
J.Med.Chem., 66, 2023
1R9U
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BU of 1r9u by Molmil
Refined structure of peptaibol zervamicin IIB in methanol solution from trans-hydrogen bond J couplings
Descriptor: ZERVAMICIN IIB
Authors:Shenkarev, Z.O, Balashova, T.A, Yakimenko, Z.A, Ovchinnikova, T.V, Arseniev, A.S.
Deposit date:2003-10-31
Release date:2004-11-09
Last modified:2018-10-10
Method:SOLUTION NMR
Cite:Biosynthetic Uniform 13C,15N-Labelling of Zervamicin Iib. Complete 13C and 15N NMR Assignment.
J.Pept.Sci., 9, 2003

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