PDB: 225399 resultsInfo pagesStatus searchChemie searchBIRD

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3VU3	Crystal structure of the Hfq and catalase HPII complex Descriptor: Catalase HPII, PROTOPORPHYRIN IX CONTAINING FE, Protein hfq Authors: Watanabe, M, Yonekura, K. Deposit date: 2012-06-15 Release date: 2013-11-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Post-Transcriptional Regulator Hfq Binds Catalase HPII: Crystal Structure of the Complex Plos One, 8, 2013
4G5X	Crystal structures of N-acyl homoserine lactonase AidH Descriptor: Alpha/beta hydrolase fold protein Authors: Liang, D.C, Yan, X.X, Gao, A. Deposit date: 2012-07-18 Release date: 2013-01-16 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.29 Å) Cite: High-resolution structures of AidH complexes provide insights into a novel catalytic mechanism for N-acyl homoserine lactonase Acta Crystallogr.,Sect.D, 69, 2013
4G8D	Crystal structures of N-acyl homoserine lactonase AidH S102G mutant Descriptor: Alpha/beta hydrolase fold protein Authors: Liang, D.C, Yan, X.X, Gao, A. Deposit date: 2012-07-23 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.35 Å) Cite: High-resolution structures of AidH complexes provide insights into a novel catalytic mechanism for N-acyl homoserine lactonase Acta Crystallogr.,Sect.D, 69, 2013
3VPC	ArgX from Sulfolobus tokodaii complexed with ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, Putative acetylornithine deacetylase Authors: Tomita, T, Horie, A, Kuzuyama, T, Nishiyama, M. Deposit date: 2012-02-29 Release date: 2013-02-27 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.87 Å) Cite: Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus. Nat.Chem.Biol., 9, 2013
4G7U	Rat Heme Oxygenase-1 in complex with Heme and CO with 16 hr Illumination: Laser off Descriptor: CARBON MONOXIDE, FORMIC ACID, Heme oxygenase 1, ... Authors: Sugishima, M, Moffat, K, Noguchi, M. Deposit date: 2012-07-20 Release date: 2012-10-31 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis. Biochemistry, 51, 2012
4G8C	Crystal structures of N-acyl homoserine lactonase AidH E219G mutant complexed with N-hexanoyl homoserine Descriptor: Alpha/beta hydrolase fold protein, N-hexanoyl-L-homoserine Authors: Liang, D.C, Yan, X.X, Gao, A. Deposit date: 2012-07-23 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.11 Å) Cite: High-resolution structures of AidH complexes provide insights into a novel catalytic mechanism for N-acyl homoserine lactonase Acta Crystallogr.,Sect.D, 69, 2013
3VBX	Exploitation of hydrogen bonding constraints and flat hydrophobic energy landscapes in Pim-1 kinase needle screening and inhibitor design Descriptor: 6-bromo-4-hydroxy-2H-chromen-2-one, Serine/threonine-protein kinase pim-1 Authors: Liu, J. Deposit date: 2012-01-02 Release date: 2012-03-21 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Implications of promiscuous Pim-1 kinase fragment inhibitor hydrophobic interactions for fragment-based drug design. J.Med.Chem., 55, 2012
3VC6	Crystal structure of enolase Tbis_1083(TARGET EFI-502310) FROM Thermobispora bispora DSM 43833 complexed with magnesium and formate Descriptor: FORMIC ACID, MAGNESIUM ION, Mandelate racemase/muconate lactonizing protein Authors: Patskovsky, Y, Toro, R, Bhosle, R, Hillerich, B, Seidel, R.D, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Zencheck, W.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) Deposit date: 2012-01-03 Release date: 2012-02-01 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.64 Å) Cite: Crystal structure of enolase Tbis_1083 FROM Thermobispora bispora DSM 43833 To be Published
8AD9	Crystal structure of ClpC2 C-terminal domain Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Cyclomarin A, ... Authors: Taylor, G, Cui, H.J, Leodolter, J, Giese, C, Weber-Ban, E. Deposit date: 2022-07-08 Release date: 2023-03-29 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.43 Å) Cite: ClpC2 protects mycobacteria against a natural antibiotic targeting ClpC1-dependent protein degradation. Commun Biol, 6, 2023
4G94	G1 ORF67 / Staphyloccus aureus sigmaA domain 4 complex Descriptor: ORF067, RNA polymerase sigma factor rpoD Authors: Darst, S.A, Osmundson, J.S, Montero-Diaz, C.M, Hochschild, A. Deposit date: 2012-07-23 Release date: 2013-01-23 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.9971 Å) Cite: Promoter-specific transcription inhibition in Staphylococcus aureus by a phage protein. Cell(Cambridge,Mass.), 151, 2012
4GFK	structures of NO factors Descriptor: Nucleoid occlusion factor SlmA Authors: Schumacher, M.A. Deposit date: 2012-08-03 Release date: 2013-06-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.95 Å) Cite: SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid. Proc.Natl.Acad.Sci.USA, 110, 2013
3VRZ	Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor 1-[4-(4-amino-7-cyclopentyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]-3-benzylurea Descriptor: 1-[4-(4-amino-7-cyclopentyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]-3-benzylurea, CALCIUM ION, CHLORIDE ION, ... Authors: Kuratani, M, Tomabechi, Y, Handa, N, Yokoyama, S. Deposit date: 2012-04-21 Release date: 2013-05-01 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.218 Å) Cite: A Pyrrolo-Pyrimidine Derivative Targets Human Primary AML Stem Cells in Vivo Sci Transl Med, 5, 2013
4GHH	Structure of Homoprotocatechuate 2,3-Dioxygenase from B.fuscum in complex with 4-Nitrocatechol at 1.55 Ang resolution Descriptor: 4-NITROCATECHOL, CALCIUM ION, CHLORIDE ION, ... Authors: Kovaleva, E.G, Lipscomb, J.D. Deposit date: 2012-08-07 Release date: 2012-10-31 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Structural basis for the role of tyrosine 257 of homoprotocatechuate 2,3-dioxygenase in substrate and oxygen activation. Biochemistry, 51, 2012
4GBF	Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ Descriptor: CHLORIDE ION, MAGNESIUM ION, PHIKZ131 Authors: Sycheva, L.V, Shneider, M.M, Leiman, P.G. Deposit date: 2012-07-27 Release date: 2012-10-17 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.949 Å) Cite: Crystal structure and location of gp131 in the bacteriophage phiKZ virion. Virology, 434, 2012
4GK8	Crystal structure of histidinol phosphate phosphatase (HISK) from Lactococcus lactis subsp. lactis Il1403 complexed with ZN and L-histidinol arsenate Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Histidinol-phosphatase, ... Authors: Fedorov, A.A, Fedorov, E.V, Ghodge, S, Raushel, F.M, Almo, S.C. Deposit date: 2012-08-10 Release date: 2013-02-27 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.933 Å) Cite: Structural and Mechanistic Characterization of l-Histidinol Phosphate Phosphatase from the Polymerase and Histidinol Phosphatase Family of Proteins. Biochemistry, 52, 2013
3VHB	IMIDAZOLE ADDUCT OF THE BACTERIAL HEMOGLOBIN FROM VITREOSCILLA SP. Descriptor: IMIDAZOLE, PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE Authors: Bolognesi, M, Boffi, A, Coletta, M, Mozzarelli, A, Pesce, A, Tarricone, C, Ascenzi, P. Deposit date: 1999-03-17 Release date: 1999-08-18 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Anticooperative ligand binding properties of recombinant ferric Vitreoscilla homodimeric hemoglobin: a thermodynamic, kinetic and X-ray crystallographic study. J.Mol.Biol., 291, 1999
8AIF	TapA acts as specific chaperone in TasA non-amyloid filament formation Descriptor: 1,2-ETHANEDIOL, NITRATE ION, YqxM protein required for localization of TasA to extracellular matrix Authors: Roske, Y, Heinemann, U. Deposit date: 2022-07-26 Release date: 2023-04-12 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.07 Å) Cite: TapA acts as specific chaperone in TasA filament formation by strand complementation. Proc.Natl.Acad.Sci.USA, 120, 2023
3VIA	Crystal structure of the PH domain of Evectin-2 from human Descriptor: Pleckstrin homology domain-containing family B member 2 Authors: Okazaki, S, Kato, R, Wakatsuki, S. Deposit date: 2011-09-26 Release date: 2012-01-25 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural basis of the strict phospholipid binding specificity of the pleckstrin homology domain of human evectin-2 Acta Crystallogr.,Sect.D, 68, 2012
4GB0	Crystal Structure of the RING domain of RNF168 Descriptor: E3 ubiquitin-protein ligase RNF168, MALONATE ION, ZINC ION Authors: Zhang, X.Q, Wang, C.L, Zang, J.Y. Deposit date: 2012-07-26 Release date: 2013-07-10 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural basis for role of ring finger protein RNF168 RING domain Cell Cycle, 12, 2013
3VST	The complex structure of XylC with Tris Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Xylosidase Authors: Huang, C.H, Sun, Y, Ko, T.P, Ma, Y, Chen, C.C, Zheng, Y, Chan, H.C, Pang, X, Wiegel, J, Shao, W, Guo, R.T. Deposit date: 2012-05-09 Release date: 2013-02-27 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.75 Å) Cite: The substrate/product-binding modes of a novel GH120 beta-xylosidase (XylC) from Thermoanaerobacterium saccharolyticum JW/SL-YS485 Biochem.J., 448, 2012
4GC3	Crystal structure of L-HISTIDINOL PHOSPHATE PHOSPHATASE (HISK) from Lactococcus lactis subsp. lactis Il1403 complexed with ZN and sulfate Descriptor: L-HISTIDINOL PHOSPHATE PHOSPHATASE, SULFATE ION, ZINC ION Authors: Fedorov, A.A, Fedorov, E.V, Ghodge, S, Raushel, F.M, Almo, S.C. Deposit date: 2012-07-29 Release date: 2013-02-27 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.32 Å) Cite: Structural and Mechanistic Characterization of l-Histidinol Phosphate Phosphatase from the Polymerase and Histidinol Phosphatase Family of Proteins. Biochemistry, 52, 2013
3VIG	Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin Descriptor: 1-DEOXYNOJIRIMYCIN, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-glucosidase, ... Authors: Jeng, W.Y, Liu, C.I, Wang, A.H.J. Deposit date: 2011-10-03 Release date: 2012-07-04 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (0.99 Å) Cite: High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates Acta Crystallogr.,Sect.D, 68, 2012
4GCS	Crystal Structure of E. coli OmpF porin in complex with Ertapenem Descriptor: (4R,5S)-3-({(3S,5S)-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl}sulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Outer membrane protein F Authors: Ziervogel, B.K, Roux, B. Deposit date: 2012-07-30 Release date: 2012-12-19 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.87 Å) Cite: The Binding of Antibiotics in OmpF Porin. Structure, 21, 2013
3VKG	X-ray structure of an MTBD truncation mutant of dynein motor domain Descriptor: ADENOSINE-5'-DIPHOSPHATE, Dynein heavy chain, cytoplasmic, ... Authors: Kon, T, Oyama, T, Shimo-Kon, R, Suto, K, Kurisu, G. Deposit date: 2011-11-16 Release date: 2012-03-14 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.81 Å) Cite: The 2.8 A crystal structure of the dynein motor domain Nature, 484, 2012
3VZ2	Structural insights into substrate and cofactor selection by sp2771 Descriptor: Succinate-semialdehyde dehydrogenase Authors: Yuan, Y.A, Yuan, Z, Yin, B, Wei, D. Deposit date: 2012-10-09 Release date: 2013-10-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis for cofactor and substrate selection by cyanobacterium succinic semialdehyde dehydrogenase J.Struct.Biol., 182, 2013

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