Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3TQQ
DownloadVisualize
BU of 3tqq by Molmil
Structure of the methionyl-tRNA formyltransferase (fmt) from Coxiella burnetii
Descriptor: Methionyl-tRNA formyltransferase, POTASSIUM ION
Authors:Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J.
Deposit date:2011-09-09
Release date:2011-09-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural genomics for drug design against the pathogen Coxiella burnetii.
Proteins, 83, 2015
3UB9
DownloadVisualize
BU of 3ub9 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with hydroxyurea bound
Descriptor: GLYCEROL, N-HYDROXYUREA, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
3UBM
DownloadVisualize
BU of 3ubm by Molmil
Formyl-CoA:oxalate CoA-transferase from Acetobacter aceti
Descriptor: COENZYME A, Formyl-CoA:oxalate CoA-transferase
Authors:Starks, C.M, Mullins, E.A, Kappock, T.J.
Deposit date:2011-10-24
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.992 Å)
Cite:Formyl-coenzyme A (CoA): Oxalate CoA-transferase from the acidophile Acetobacter aceti has a distinctive electrostatic surface and inherent acid stability.
Protein Sci., 21, 2012
3TS3
DownloadVisualize
BU of 3ts3 by Molmil
Crystal structure of the projection domain of the turkey astrovirus capsid protein at 1.5 angstrom resolution
Descriptor: Capsid polyprotein, SULFATE ION
Authors:DuBois, R.M, Schultz-Cherry, S, White, S.W.
Deposit date:2011-09-12
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of the avian astrovirus capsid spike.
J.Virol., 87, 2013
3TT7
DownloadVisualize
BU of 3tt7 by Molmil
Structure of ClpP from Bacillus subtilis in complex with DFP
Descriptor: ATP-dependent Clp protease proteolytic subunit, DIISOPROPYL PHOSPHONATE
Authors:Lee, B.-G, Kim, M.K, Song, H.K.
Deposit date:2011-09-14
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.558 Å)
Cite:Structural insights into the conformational diversity of ClpP from Bacillus subtilis
Mol.Cells, 32, 2011
3TUZ
DownloadVisualize
BU of 3tuz by Molmil
Inward facing conformations of the MetNI methionine ABC transporter: CY5 SeMet soak crystal form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-methionine transport system permease protein metI, Methionine import ATP-binding protein MetN, ...
Authors:Johnson, E, Nguyen, P, Rees, D.C.
Deposit date:2011-09-19
Release date:2011-11-30
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Inward facing conformations of the MetNI methionine ABC transporter: Implications for the mechanism of transinhibition.
Protein Sci., 21, 2012
3TUI
DownloadVisualize
BU of 3tui by Molmil
Inward facing conformations of the MetNI methionine ABC transporter: CY5 native crystal form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, D-methionine transport system permease protein metI, Methionine import ATP-binding protein MetN
Authors:Johnson, E, Nguyen, P.T, Rees, D.C.
Deposit date:2011-09-16
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Inward facing conformations of the MetNI methionine ABC transporter: Implications for the mechanism of transinhibition.
Protein Sci., 21, 2012
3U0F
DownloadVisualize
BU of 3u0f by Molmil
The structure of Beta-ketoacyl synthase from Brucella melitensis bound to the fragment 7-hydroxycoumarin
Descriptor: 7-hydroxy-2H-chromen-2-one, Beta-ketoacyl synthase, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-09-28
Release date:2011-10-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural characterization of beta-ketoacyl ACP synthase I bound to platencin and fragment screening molecules at two substrate binding sites.
Proteins, 88, 2020
3U7E
DownloadVisualize
BU of 3u7e by Molmil
Crystal structure of mPNKP catalytic fragment (D170A)
Descriptor: Bifunctional polynucleotide phosphatase/kinase, GLYCEROL, MAGNESIUM ION, ...
Authors:Coquelle, N, Havali, Z, Bernstein, N, Green, R, Glover, J.N.M.
Deposit date:2011-10-13
Release date:2011-12-14
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for the phosphatase activity of polynucleotide kinase/phosphatase on single- and double-stranded DNA substrates.
Proc.Natl.Acad.Sci.USA, 108, 2011
3U3D
DownloadVisualize
BU of 3u3d by Molmil
Plasmodium falciparum Sir2A preferentially hydrolyzes medium and long chain fatty acyl lysine
Descriptor: GLYCEROL, Transcriptional regulatory protein sir2 homologue, ZINC ION, ...
Authors:Zhou, Y, Hao, Q.
Deposit date:2011-10-05
Release date:2011-11-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Plasmodium falciparum Sir2A Preferentially Hydrolyzes Medium and Long Chain Fatty Acyl Lysine
Acs Chem.Biol., 2011
3U9O
DownloadVisualize
BU of 3u9o by Molmil
Crystal structure of Staphylococcal nuclease variant NVIAGA/N100G at cryogenic temperature
Descriptor: PHOSPHATE ION, Thermonuclease
Authors:Schlessman, J.L, Doctrow, B.M, Garcia-Moreno E, B.
Deposit date:2011-10-19
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Local flexibility as a determinant of pKa values of surface ionizable groups in proteins
To be Published
3U3N
DownloadVisualize
BU of 3u3n by Molmil
Crystal structure of tablysin-15
Descriptor: CITRIC ACID, PALMITIC ACID, PRASEODYMIUM ION, ...
Authors:Andersen, J.F.
Deposit date:2011-10-06
Release date:2012-02-15
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Structure of protein having inhibitory disintegrin and leukotriene scavenging functions contained in single domain.
J.Biol.Chem., 287, 2012
3U47
DownloadVisualize
BU of 3u47 by Molmil
Human Carbonic Anhydrase II V143L
Descriptor: Carbonic anhydrase 2, GLYCEROL, ZINC ION
Authors:West, D, Mckenna, R.
Deposit date:2011-10-07
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural modification of the hydrophobic pocket of Human Carbonic Anhydrase II
To be Published
3TLE
DownloadVisualize
BU of 3tle by Molmil
Microcin C7 self immunity protein MccF in complex with glutamyl sulfamoyl adenylate
Descriptor: 1,2-ETHANEDIOL, MccF, O5'-(L-GLUTAMYL-SULFAMOYL)-ADENOSINE
Authors:Agarwal, V, Nair, S.K.
Deposit date:2011-08-29
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.
Proc.Natl.Acad.Sci.USA, 109, 2012
3U7F
DownloadVisualize
BU of 3u7f by Molmil
Crystal structure of mPNKP catalytic fragment (D170A) bound to single-stranded DNA (TCCTCp)
Descriptor: Bifunctional polynucleotide phosphatase/kinase, DNA, GLYCEROL, ...
Authors:Coquelle, N, Havali, Z, Bernstein, N, Green, R, Glover, J.N.M.
Deposit date:2011-10-13
Release date:2011-12-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the phosphatase activity of polynucleotide kinase/phosphatase on single- and double-stranded DNA substrates.
Proc.Natl.Acad.Sci.USA, 108, 2011
3U9P
DownloadVisualize
BU of 3u9p by Molmil
Crystal Structure of Murine Siderocalin in Complex with an Fab Fragment
Descriptor: Monoclonal Fab Fragment Heavy Chain, Monoclonal Fab Fragment Light Chain, Neutrophil gelatinase-associated lipocalin
Authors:Correnti, C, Strong, R.K.
Deposit date:2011-10-19
Release date:2013-05-01
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Siderocalin/Lcn2/NGAL/24p3 does not drive apoptosis through gentisic acid mediated iron withdrawal in hematopoietic cell lines.
Plos One, 7, 2012
3UAY
DownloadVisualize
BU of 3uay by Molmil
Crystal structure of Bacillus cereus adenosine phosphorylase D204N mutant complexed with adenosine
Descriptor: ADENOSINE, GLYCEROL, Purine nucleoside phosphorylase deoD-type, ...
Authors:Dessanti, P, Zhang, Y, Allegrini, S, Tozzi, M.G, Sgarrella, F, Ealick, S.E.
Deposit date:2011-10-22
Release date:2012-02-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural basis of the substrate specificity of Bacillus cereus adenosine phosphorylase.
Acta Crystallogr.,Sect.D, 68, 2012
3UB7
DownloadVisualize
BU of 3ub7 by Molmil
Periplasmic portion of the Helicobacter pylori chemoreceptor TlpB with acetamide bound
Descriptor: ACETAMIDE, GLYCEROL, SULFATE ION, ...
Authors:Henderson, J.N, Sweeney, E.G, Goers, J, Wreden, C, Hicks, K.G, Parthasarathy, R, Guillemin, K.J, Remington, S.J.
Deposit date:2011-10-23
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure and proposed mechanism for the pH-sensing Helicobacter pylori chemoreceptor TlpB.
Structure, 20, 2012
3U2Z
DownloadVisualize
BU of 3u2z by Molmil
Activator-Bound Structure of Human Pyruvate Kinase M2
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 6-(3-aminobenzyl)-4-methyl-2-methylsulfinyl-4,6-dihydro-5H-thieno[2',3':4,5]pyrrolo[2,3-d]pyridazin-5-one, Pyruvate kinase isozymes M1/M2, ...
Authors:Hong, B, Dimov, S, Tempel, W, Auld, D, Thomas, C, Boxer, M, Jianq, J.-K, Skoumbourdis, A, Min, S, Southall, N, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Inglese, J, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2011-10-04
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pyruvate kinase M2 activators promote tetramer formation and suppress tumorigenesis.
Nat.Chem.Biol., 8, 2012
3U65
DownloadVisualize
BU of 3u65 by Molmil
The Crystal Structure of Tat-P(T) (Tp0957)
Descriptor: 1,2-ETHANEDIOL, THIOCYANATE ION, Tp33 protein
Authors:Brautigam, C.A, Tomchick, D.R, Deka, R.K, Norgard, M.V.
Deposit date:2011-10-12
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural, Bioinformatic, and In Vivo Analyses of Two Treponema pallidum Lipoproteins Reveal a Unique TRAP Transporter.
J.Mol.Biol., 416, 2012
3TIP
DownloadVisualize
BU of 3tip by Molmil
Crystal structure of Staphylococcus aureus SasG E-G52 module
Descriptor: Surface protein G
Authors:Gruszka, D.T, Wojdyla, J.A, Turkenburg, J.P, Potts, J.R.
Deposit date:2011-08-21
Release date:2012-04-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7009 Å)
Cite:Staphylococcal biofilm-forming protein has a contiguous rod-like structure.
Proc.Natl.Acad.Sci.USA, 109, 2012
3U8M
DownloadVisualize
BU of 3u8m by Molmil
Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3920 (1-(6-bromopyridin-3-yl)-1,4-diazepane)
Descriptor: 1-(6-bromopyridin-3-yl)-1,4-diazepane, Acetylcholine-binding protein, SULFATE ION
Authors:Rohde, L.A.H, Ahring, P.K, Jensen, M.L, Nielsen, E.O, Peters, D, Helgstrand, C, Krintel, C, Harpsoe, K, Gajhede, M, Kastrup, J.S, Balle, T.
Deposit date:2011-10-17
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha 4 beta 2 receptors: unique role of halogen bonding revealed.
J.Biol.Chem., 287, 2012
3Q6K
DownloadVisualize
BU of 3q6k by Molmil
Salivary protein from Lutzomyia longipalpis
Descriptor: 43.2 kDa salivary protein, CITRIC ACID, SEROTONIN
Authors:Andersen, J.F, Xu, X, Chang, B.W, Collin, N, Valenzuela, J.G, Ribeiro, J.M.
Deposit date:2011-01-02
Release date:2011-07-27
Last modified:2019-10-23
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structure and function of a "yellow" protein from saliva of the sand fly Lutzomyia longipalpis that confers protective immunity against Leishmania major infection.
J.Biol.Chem., 286, 2011
3Q6D
DownloadVisualize
BU of 3q6d by Molmil
Xaa-Pro dipeptidase from Bacillus anthracis.
Descriptor: CALCIUM ION, GLYCEROL, Proline dipeptidase
Authors:Osipiuk, J, Makowska-Grzyska, M, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-12-31
Release date:2011-02-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Xaa-Pro dipeptidase from Bacillus anthracis.
To be Published
3Q7Z
DownloadVisualize
BU of 3q7z by Molmil
CBAP-acylated BlaR1 sensor domain from Staphylococcus aureus
Descriptor: (2R,4S)-2-[(1R)-1-{[(2'-carboxybiphenyl-2-yl)carbonyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, Beta-lactamase regulatory protein BlaR1
Authors:Borbulevych, O.Y, Mobashery, S, Baker, B.M.
Deposit date:2011-01-05
Release date:2011-07-06
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Lysine Nzeta-decarboxylation switch and activation of the beta-lactam sensor domain of BlaR1 protein of methicillin-resistant Staphylococcus aureus.
J.Biol.Chem., 286, 2011

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon