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2ZIK
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BU of 2zik by Molmil
Crystal Structure of Human Lysozyme from Pichia pastoris
Descriptor: Lysozyme C, SODIUM ION
Authors:Tamada, T, Kuroki, R, Koshiba, T.
Deposit date:2008-02-18
Release date:2009-01-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Preparation and characterization of methyonyl-lysine attached human lysozyme expressed in Escherichia coli and its effective conversion to the authentic-like protein
To be Published
2ZRQ
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BU of 2zrq by Molmil
Crystal structure of S324A-subtilisin
Descriptor: CALCIUM ION, Tk-subtilisin
Authors:Tanaka, S, Takeuchi, Y, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2008-08-28
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding
Febs Lett., 582, 2008
3EP5
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BU of 3ep5 by Molmil
Human AdoMetDC E178Q mutant with no putrescine bound
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PYRUVIC ACID, S-adenosylmethionine decarboxylase alpha chain, ...
Authors:Bale, S, Lopez, M.M, Makhatadze, G.I, Fang, Q, Pegg, A.E, Ealick, S.E.
Deposit date:2008-09-29
Release date:2008-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase.
Biochemistry, 47, 2008
2Z8J
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BU of 2z8j by Molmil
Crystal Structure of Escherichia coli gamma-Glutamyltranspeptidase in Complex with Azaserine prepared in the dark
Descriptor: Gamma-glutamyltranspeptidase, O-DIAZOACETYL-L-SERINE
Authors:Wada, K, Irie, M, Fukuyama, K.
Deposit date:2007-09-05
Release date:2008-06-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
2ZBS
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BU of 2zbs by Molmil
Crystal structure of human estrogen-related receptor gamma ligand binding domain apo form
Descriptor: Estrogen-related receptor gamma
Authors:Matsushima, A, Kakuta, Y, Teramoto, T, Shimohigashi, Y.
Deposit date:2007-10-27
Release date:2008-10-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:ERRgamma tethers strongly bisphenol A and 4-alpha-cumylphenol in an induced-fit manner
Biochem.Biophys.Res.Commun., 373, 2008
3EDX
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BU of 3edx by Molmil
Crystal structure of the W215A/E217A mutant of murine thrombin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Thrombin heavy chain, ...
Authors:Gandhi, P.S, Page, M.J, Chen, Z, Bush-pelc, L, Di Cera, E.
Deposit date:2008-09-03
Release date:2009-07-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular Basis for the Kinetic Differences of the W215A/E217A Mutant of Human and Murine Thrombin
To be Published
2ZQ2
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BU of 2zq2 by Molmil
Exploring trypsin S3 pocket
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Brandt, T, Baum, B, Heine, A, Klebe, G.
Deposit date:2008-08-03
Release date:2009-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Congeneric but still distinct: how closely related trypsin ligands exhibit different thermodynamic and structural properties
J.Mol.Biol., 405, 2011
2ZDL
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BU of 2zdl by Molmil
Exploring trypsin S3 pocket
Descriptor: (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclopentyloxy)ethanoyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Baum, B, Brandt, T, Heine, A, Klebe, G.
Deposit date:2007-11-26
Release date:2008-10-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Congeneric but still distinct: how closely related trypsin ligands exhibit different thermodynamic and structural properties
J.Mol.Biol., 405, 2011
2ZIJ
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BU of 2zij by Molmil
Crystal Structure of Human Lysozyme Expressed in E. coli.
Descriptor: Lysozyme C, SODIUM ION
Authors:Tamada, T, Kuroki, R, Koshiba, T.
Deposit date:2008-02-18
Release date:2009-01-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Preparation and characterization of methyonyl-lysine attached human lysozyme expressed in Escherichia coli and its effective conversion to the authentic-like protein
To be Published
2ZIX
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BU of 2zix by Molmil
Crystal structure of the Mus81-Eme1 complex
Descriptor: Crossover junction endonuclease EME1, Crossover junction endonuclease MUS81
Authors:Chang, J.H, Kim, J.J, Choi, J.M, Lee, J.H, Cho, Y.
Deposit date:2008-02-25
Release date:2008-04-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of the Mus81-Eme1 complex
Genes Dev., 22, 2008
2ZJN
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BU of 2zjn by Molmil
Crystal structure of the human BACE1 catalytic domain in complex with N-[1-(5-chloro-2-isopropoxy-3-methoxy-benzyl)-piperidin-4-yl]-2-(2-methyl-4-sulfamoyl-phenoxy)-acetamide
Descriptor: Beta-secretase 1, N-{1-[5-chloro-3-methoxy-2-(1-methylethoxy)benzyl]piperidin-4-yl}-2-(2-methyl-4-sulfamoylphenoxy)acetamide
Authors:Randal, M, Lam, M.B, Fahr, B.T, Romanowski, M.J.
Deposit date:2008-03-07
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Fragment-based discovery of novel BACE1 inhibitors using Tethering technology
To be Published
2ZV6
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BU of 2zv6 by Molmil
Crystal structure of human squamous cell carcinoma antigen 1
Descriptor: Serpin B3
Authors:Zheng, B, Matoba, Y, Katagiri, C, Hibino, T, Sugiyama, M.
Deposit date:2008-11-01
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of SCCA1 and insight about the interaction with JNK1
Biochem.Biophys.Res.Commun., 380, 2009
3EIM
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BU of 3eim by Molmil
Metal exchange in Thermolysin
Descriptor: CALCIUM ION, COPPER (I) ION, GLYCEROL, ...
Authors:Englert, L, Heine, A, Klebe, G.
Deposit date:2008-09-16
Release date:2009-10-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Metal exchange in Thermolysin
To be Published
2ZOL
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BU of 2zol by Molmil
Crystal structure of H-2Db in complex with the W513S variant of JHMV epitope S510
Descriptor: 9-meric peptide from Spike glycoprotein, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Theodossis, A, Dunstone, M.A, Rossjohn, J.
Deposit date:2008-05-22
Release date:2008-06-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and biological basis of CTL escape in coronavirus-infected mice.
J Immunol., 180, 2008
3EDY
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BU of 3edy by Molmil
Crystal Structure of the Precursor Form of Human Tripeptidyl-Peptidase 1
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Guhaniyogi, J, Sohar, I, Das, K, Lobel, P, Stock, A.M.
Deposit date:2008-09-03
Release date:2008-11-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure and Autoactivation Pathway of the Precursor Form of Human Tripeptidyl-peptidase 1, the Enzyme Deficient in Late Infantile Ceroid Lipofuscinosis
J.Biol.Chem., 284, 2009
2ZDA
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BU of 2zda by Molmil
Exploring Thrombin S1 pocket
Descriptor: D-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamide, Hirudin variant-1, PHOSPHATE ION, ...
Authors:Baum, B, Heine, A, Klebe, G.
Deposit date:2007-11-21
Release date:2008-10-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Think twice: understanding the high potency of bis(phenyl)methane inhibitors of thrombin
J.Mol.Biol., 391, 2009
2ZWO
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BU of 2zwo by Molmil
Crystal structure of Ca2 site mutant of Pro-S324A
Descriptor: CALCIUM ION, Tk-subtilisin
Authors:Takeuchi, Y, Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2008-12-17
Release date:2009-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Requirement of a unique Ca(2+)-binding loop for folding of Tk-subtilisin from a hyperthermophilic archaeon.
Biochemistry, 48, 2009
2ZFP
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BU of 2zfp by Molmil
Thrombin Inibition
Descriptor: 1-[(2R)-2-aminobutanoyl]-N-(3-chlorobenzyl)-L-prolinamide, Hirudin variant-1, SODIUM ION, ...
Authors:Baum, B, Heine, A, Klebe, G.
Deposit date:2008-01-08
Release date:2008-12-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Think twice: understanding the high potency of bis(phenyl)methane inhibitors of thrombin
J.Mol.Biol., 391, 2009
2ZHJ
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BU of 2zhj by Molmil
Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A resolution
Descriptor: Annexin A4, SODIUM ION
Authors:Butsushita, K, Ida, K, Fukuoka, S.-I, Arii, Y.
Deposit date:2008-02-06
Release date:2009-02-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Analysis for the Soduim-Dependent Dissociation of Annexin A4: Crystal Structures of Soduim-Bound Annexin A4 at High Resolutions
To be Published
2ZAV
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BU of 2zav by Molmil
Arginase I (homo sapiens): native and unliganded structure at 1.70 A resolution
Descriptor: Arginase-1, MANGANESE (II) ION
Authors:Di Costanzo, L, Christianson, D.W.
Deposit date:2007-10-11
Release date:2007-10-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human arginase I complexed with thiosemicarbazide reveals an unusual thiocarbonyl mu-sulfide ligand in the binuclear manganese cluster
J.Am.Chem.Soc., 129, 2007
3HBV
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BU of 3hbv by Molmil
PrtC methionine mutants: M226A in-house
Descriptor: CALCIUM ION, CHLORIDE ION, Secreted protease C, ...
Authors:Oberholzer, A.E, Bumann, M, Hege, T, Russo, S, Baumann, U.
Deposit date:2009-05-05
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site
Biol.Chem., 390, 2009
2ZRS
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BU of 2zrs by Molmil
Crystal structure of Ca2+-bound form of des3-23ALG-2
Descriptor: CALCIUM ION, Programmed cell death protein 6
Authors:Suzuki, H, Kawasaki, M, Kakiuchi, T, Shibata, H, Wakatsuki, S, Maki, M.
Deposit date:2008-09-01
Release date:2008-11-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2
ACTA CRYSTALLOGR.,SECT.F, 64, 2008
3GRP
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BU of 3grp by Molmil
2.1 Angstrom crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from Bartonella henselae
Descriptor: 3-oxoacyl-(Acyl carrierprotein) reductase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2009-03-26
Release date:2009-04-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:2.1 Angstrom crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from Bartonella henselae
To be Published
3H0V
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BU of 3h0v by Molmil
Human AdoMetDC with 5'-Deoxy-5'-(dimethylsulfonio) adenosine
Descriptor: 1,4-DIAMINOBUTANE, 5'-deoxy-5'-(dimethyl-lambda~4~-sulfanyl)adenosine, PYRUVIC ACID, ...
Authors:Bale, S, Brooks, W.H, Hanes, J.W, Mahesan, A.M, Guida, W.C, Ealick, S.E.
Deposit date:2009-04-10
Release date:2009-06-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Role of the sulfonium center in determining the ligand specificity of human s-adenosylmethionine decarboxylase.
Biochemistry, 48, 2009
3DV1
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BU of 3dv1 by Molmil
Crystal structure of human beta-secretase in complex with NVP-ARV999
Descriptor: (2R,4S)-N-butyl-4-[(2S,5S,7R)-2,7-dimethyl-3,15-dioxo-1,4-diazacyclopentadecan-5-yl]-4-hydroxy-2-methylbutanamide, Beta-secretase 1
Authors:Rondeau, J.-M.
Deposit date:2008-07-18
Release date:2009-02-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Macrocyclic peptidomimetic beta-secretase (BACE-1) inhibitors with activity in vivo.
Bioorg.Med.Chem.Lett., 19, 2009

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