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2JA4
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Crystal structure of CD5 domain III reveals the fold of a group B scavenger cysteine-rich receptor
Descriptor: T-CELL SURFACE GLYCOPROTEIN CD5
Authors:Rodamilans, B, Munoz, I.G, Sarrias, M.R, Lozano, F, Blanco, F.J, Montoya, G.
Deposit date:2006-11-21
Release date:2007-03-06
Last modified:2017-06-28
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of the Third Extracellular Domain of Cd5 Reveals the Fold of a Group B Scavenger Cysteine-Rich Receptor Domain.
J.Biol.Chem., 282, 2007
2JCC
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BU of 2jcc by Molmil
AH3 recognition of mutant HLA-A2 W167A
Descriptor: BETA-2-MICROGLOBULIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2 ALPHA CHAIN, ...
Authors:Miller, P, Benhar, Y.P, Biddison, W, Collins, E.J.
Deposit date:2006-12-21
Release date:2007-10-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Single Mhc Mutation Eliminates Enthalpy Associated with T Cell Receptor Binding.
J.Mol.Biol., 373, 2007
3A7S
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BU of 3a7s by Molmil
Catalytic domain of UCH37
Descriptor: CHLORIDE ION, Ubiquitin carboxyl-terminal hydrolase isozyme L5
Authors:Nishio, K, Kim, S.W, Kawai, K, Mizushima, T, Yamane, T, Hamazaki, J, Murata, S, Tanaka, K.
Deposit date:2009-10-04
Release date:2009-11-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the de-ubiquitinating enzyme UCH37 (human UCH-L5) catalytic domain
Biochem.Biophys.Res.Commun., 2009
3A82
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Crystal Structure of Trypsin complexed with pre-synthesized (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid
Descriptor: (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In-Crystal Chemical Ligation for Drug Discovery
To be Published
3A8D
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BU of 3a8d by Molmil
Crystal Structure of Trypsin complexed with (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid (under aniline-free condition)
Descriptor: (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In-Crystal Chemical Ligation for Drug Discovery
To be Published
3FP6
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BU of 3fp6 by Molmil
Anionic trypsin in complex with bovine pancreatic trypsin inhibitor (BPTI) determined to the 1.49 A resolution limit
Descriptor: 1,2-ETHANEDIOL, Anionic trypsin-2, CALCIUM ION, ...
Authors:Zakharova, E, Horvath, M.P, Goldenberg, D.P.
Deposit date:2009-01-04
Release date:2009-02-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure of a serine protease poised to resynthesize a peptide bond.
Proc.Natl.Acad.Sci.USA, 106, 2009
2JHH
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BU of 2jhh by Molmil
Structure of globular heads of M-ficolin at acidic pH
Descriptor: CALCIUM ION, FICOLIN-1
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for innate immune sensing by M-ficolin and its control by a pH-dependent conformational switch.
J. Biol. Chem., 282, 2007
2JRI
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Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule.
Descriptor: Ataxin-3, UBC protein
Authors:Nicastro, G, Masino, L, Esposito, V, Menon, R, Pastore, A.
Deposit date:2007-06-27
Release date:2008-07-01
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Understanding the plasticity of the ubiquitin-protein recognition code: the josephin domain of ataxin-3 is a diubiquitin binding motif
To be Published
2JBK
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membrane-bound glutamate carboxypeptidase II (GCPII) in complex with quisqualic acid (quisqualate, alpha-amino-3,5-dioxo-1,2,4- oxadiazolidine-2-propanoic acid)
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mesters, J.R, Henning, K, Hilgenfeld, R.
Deposit date:2006-12-07
Release date:2006-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Human Glutamate Carboxypeptidase II Inhibition: Structures of Gcpii in Complex with Two Potent Inhibitors, Quisqualate and 2-Pmpa.
Acta Crystallogr.,Sect.D, 63, 2007
2JBJ
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membrane-bound glutamate carboxypeptidase II (GCPII) in complex with 2-PMPA (2-phosphonoMethyl-pentanedioic acid)
Descriptor: (2S)-2-(PHOSPHONOMETHYL)PENTANEDIOIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mesters, J.R, Henning, K, Hilgenfeld, R.
Deposit date:2006-12-07
Release date:2006-12-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Human Glutamate Carboxypeptidase II Inhibition: Structures of Gcpii in Complex with Two Potent Inhibitors, Quisqualate and 2-Pmpa.
Acta Crystallogr.,Sect.D, 63, 2007
3F2P
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Thermolysin inhibition
Descriptor: 3-methyl-2-(propanoyloxy)benzoic acid, CALCIUM ION, DIMETHYL SULFOXIDE, ...
Authors:Englert, L, Heine, A, Klebe, G.
Deposit date:2008-10-30
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Fragment-Based Lead Discovery: Screening and Optimizing Fragments for Thermolysin Inhibition.
Chemmedchem, 5, 2010
2JFE
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BU of 2jfe by Molmil
The crystal structure of human cytosolic beta-glucosidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CYTOSOLIC BETA-GLUCOSIDASE
Authors:Czjzek, M, Tribolo, S, Berrin, J.G, Kroon, P.A, Juge, N.
Deposit date:2007-01-31
Release date:2007-06-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structure of Human Cytosolic Beta-Glucosidase Unravels the Substrate Aglycone Specificity of a Family 1 Glycoside Hydrolase
J.Mol.Biol., 370, 2007
2JHK
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Structure of globular heads of M-ficolin complexed with N-acetyl-D- glucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FICOLIN-1
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Innate Immune Sensing by M-Ficolin and its Control by a Ph-Dependent Conformational Switch.
J.Biol.Chem., 282, 2007
3A85
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Crystal Structure of Trypsin complexed with (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid (soaking 15 seconds)
Descriptor: (E)-2-(4-carbamimidoylbenzylideneaminooxy)acetic acid, CALCIUM ION, Cationic trypsin, ...
Authors:Yamane, J, Yao, M, Tanaka, I.
Deposit date:2009-10-05
Release date:2010-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:In-Crystal Chemical Ligation for Drug Discovery
To be Published
2JGZ
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BU of 2jgz by Molmil
Crystal structure of phospho-CDK2 in complex with Cyclin B
Descriptor: CELL DIVISION PROTEIN KINASE 2, G2/MITOTIC-SPECIFIC CYCLIN-B1
Authors:Brown, N.R, Petri, E, Lowe, E.D, Skamnaki, V, Johnson, L.N.
Deposit date:2007-02-17
Release date:2007-05-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Cyclin B and cyclin A confer different substrate recognition properties on CDK2.
Cell Cycle, 6, 2007
2JHI
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BU of 2jhi by Molmil
Structure of globular heads of M-ficolin complexed with N-acetyl-D- galactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, FICOLIN-1
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Innate Immune Sensing by M-Ficolin and its Control by a Ph-Dependent Conformational Switch.
J.Biol.Chem., 282, 2007
3F6E
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BU of 3f6e by Molmil
Crystal structure of benzoylformate decarboxylase in complex with the pyridyl inhibitor 3-PKB
Descriptor: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-2-[(1S,2E)-1-hydroxy-3-pyridin-3-ylprop-2-en-1-yl]-4-methyl-1,3-thiazol-3-ium, Benzoylformate decarboxylase, MAGNESIUM ION
Authors:Brandt, G.S, McLeish, M.J, Kenyon, G.L, Petsko, G.A, Ringe, D, Jordan, F.
Deposit date:2008-11-05
Release date:2008-12-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Detection and time course of formation of major thiamin diphosphate-bound covalent intermediates derived from a chromophoric substrate analogue on benzoylformate decarboxylase.
Biochemistry, 48, 2009
2W1C
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BU of 2w1c by Molmil
Structure determination of Aurora Kinase in complex with inhibitor
Descriptor: 4-{[2-(4-{[(4-FLUOROPHENYL)CARBONYL]AMINO}-1H-PYRAZOL-3-YL)-1H-BENZIMIDAZOL-6-YL]METHYL}MORPHOLIN-4-IUM, SERINE/THREONINE-PROTEIN KINASE 6
Authors:Howard, S, Berdini, V, Boulstridge, J.A, Carr, M.G, Cross, D.M, Curry, J, Devine, L.A, Early, T.R, Fazal, L, Gill, A.L, Heathcote, M, Maman, S, Matthews, J.E, McMenamin, R.L, Navarro, E.F, O'Brien, M.A, O'Reilly, M, Rees, D.C, Reule, M, Tisi, D, Williams, G, Vinkovic, M, Wyatt, P.G.
Deposit date:2008-10-17
Release date:2009-01-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Fragment-Based Discovery of the Pyrazol-4-Yl Urea (at9283), a Multitargeted Kinase Inhibitor with Potent Aurora Kinase Activity.
J.Med.Chem., 52, 2009
2VVA
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BU of 2vva by Molmil
Human carbonic anhydrase in complex with CO2
Descriptor: CARBON DIOXIDE, CARBONIC ANHYDRASE 2, GLYCEROL, ...
Authors:Sjoeblom, B, Polentarutti, M, Djinovic-Carugo, K.
Deposit date:2008-06-04
Release date:2009-07-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Study of X-Ray Induced Activation of Carbonic Anhydrase.
Proc.Natl.Acad.Sci.USA, 106, 2009
2W05
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BU of 2w05 by Molmil
Structure of CDK2 in complex with an imidazolyl pyrimidine, compound 5b
Descriptor: CELL DIVISION PROTEIN KINASE 2, N-(2-METHOXYETHYL)-4-({4-[2-METHYL-1-(1-METHYLETHYL)-1H-IMIDAZOL-5-YL]PYRIMIDIN-2-YL}AMINO)BENZENESULFONAMIDE
Authors:Anderson, M, Andrews, D.M, Barker, A.J, Brassington, C.A, Breed, J, Byth, K.F, Culshaw, J.D, Finlay, M.R, Fisher, E, Green, C.P, Heaton, D.W, Nash, I.A, Newcombe, N.J, Oakes, S.E, Pauptit, R.A, Roberts, A, Stanway, J.J, Thomas, A.P, Tucker, J.A, Weir, H.M.
Deposit date:2008-08-08
Release date:2008-10-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Imidazoles: Sar and Development of a Potent Class of Cyclin-Dependent Kinase Inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008
2JYT
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BU of 2jyt by Molmil
Human Granulin C, isomer 1
Descriptor: Granulin-5
Authors:Tolkatchev, D, Wang, P, Chen, Z, Xu, P, Ni, F.
Deposit date:2007-12-19
Release date:2008-04-22
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Structure dissection of human progranulin identifies well-folded granulin/epithelin modules with unique functional activities.
Protein Sci., 17, 2008
2JUP
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BU of 2jup by Molmil
FBP28WW2 domain in complex with the PPLIPPPP peptide
Descriptor: Formin-1, Transcription elongation regulator 1
Authors:Ramirez-Espain, X, Ruiz, L, Martin-Malpartida, P, Oschkinat, H, Macias, M.J.
Deposit date:2007-09-01
Release date:2007-11-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Characterization of a New Binding Motif and a Novel Binding Mode in Group 2 WW Domains
J.Mol.Biol., 373, 2007
3FCQ
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Thermolysin inhibition
Descriptor: 2-(acetyloxy)-3-methylbenzoic acid, CALCIUM ION, Thermolysin, ...
Authors:Steuber, H, Englert, L, Silber, K, Heine, A, Klebe, G.
Deposit date:2008-11-22
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Fragment-Based Lead Discovery: Screening and Optimizing Fragments for Thermolysin Inhibition.
Chemmedchem, 5, 2010
2K0B
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BU of 2k0b by Molmil
NMR structure of the UBA domain of p62 (SQSTM1)
Descriptor: Sequestosome-1
Authors:Long, J.E, Ciani, B, Gallagher, T.R.A, Cavey, J.R, Sheppard, P.W, Layfield, R, Searle, M.S.
Deposit date:2008-01-31
Release date:2008-02-19
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Conformation and dynamics of the three-helix bundle UBA domain of p62 from experiment and simulation.
Proteins, 71, 2007
2K1P
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Solution structure of the second zinc finger domain of ZRANB2/ZNF265
Descriptor: ZINC ION, Zinc finger Ran-binding domain-containing protein 2
Authors:Loughlin, F.E, Mackay, J.P.
Deposit date:2008-03-13
Release date:2009-03-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The zinc fingers of the SR-proein ZRANB2 recognize 5'splice site-like sequences and constitute a distinct class of RNA binding domain
To be Published

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