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4C0L
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BU of 4c0l by Molmil
Crystal structure of Drosophila Miro EF hand and cGTPase domains bound to one magnesium ion and Mg:GDP (MgGDP-MiroS)
Descriptor: GUANOSINE-5'-DIPHOSPHATE, L-HOMOSERINE, MAGNESIUM ION, ...
Authors:Klosowiak, J.L, Focia, P.J, Wawrzak, Z, Chakravarthy, S, Landahl, E.C, Freymann, D.M, Rice, S.E.
Deposit date:2013-08-05
Release date:2013-10-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Coupling of the EF Hand and C-Terminal Gtpase Domains in the Mitochondrial Protein Miro.
Embo Rep., 14, 2013
4BY5
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BU of 4by5 by Molmil
Crystal structure of Drosophila Frq2
Descriptor: CALCIUM ION, FI18190P1, SODIUM ION
Authors:Banos-Mateos, S, Chaves-Sanjuan, A, Sanchez-Barrena, M.J.
Deposit date:2013-07-17
Release date:2014-08-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:The Guanine-Exchange Factor Ric8A Binds the Calcium Sensor Ncs-1 to Regulate Synapse Number and Probability of Release.
J.Cell.Sci., 127, 2014
4CYC
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BU of 4cyc by Molmil
CRYSTAL STRUCTURE OF A UBX-EXD-DNA COMPLEX INCLUDING THE HEXAPEPTIDE AND UBDA MOTIFS
Descriptor: 5'-D(*AP*CP*GP*TP*GP*AP*TP*TP*TP*AP*TP*GP*GP*CP*GP)-3', 5'-D(*GP*TP*CP*GP*CP*CP*AP*TP*AP*AP*AP*TP*CP*AP*CP)-3', HOMEOBOX PROTEIN EXTRADENTICLE, ...
Authors:Foos, N, Mate, M.J, Ortiz-Lombardia, M.
Deposit date:2014-04-10
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:A Flexible Extension of the Drosophila Ultrabithorax Homeodomain Defines a Novel Hox/Pbc Interaction Mode.
Structure, 23, 2015
4EAG
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BU of 4eag by Molmil
Co-crystal structure of an chimeric AMPK core with ATP
Descriptor: 5'-AMP-activated protein kinase subunit beta-1, 5'-AMP-activated protein kinase subunit gamma-1, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Chen, L, Wang, J, Zhang, Y.-Y, Yan, S.F, Neumann, D, Schlattner, U, Wang, Z.-X, Wu, J.-W.
Deposit date:2012-03-22
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:AMP-activated protein kinase undergoes nucleotide-dependent conformational changes
Nat.Struct.Mol.Biol., 19, 2012
7KR5
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BU of 7kr5 by Molmil
Cryo-EM structure of the CRAC channel Orai in an open conformation; H206A gain-of-function mutation in complex with an antibody
Descriptor: 19B5 Fab heavy chain, 19B5 Fab light chain, CALCIUM ION, ...
Authors:Long, S.B, Hou, X, Outhwaite, I.R.
Deposit date:2020-11-18
Release date:2020-12-09
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the calcium release-activated calcium channel Orai in an open conformation.
Elife, 9, 2020
8PN0
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BU of 8pn0 by Molmil
HEV gt3 P domain in complex with glycan-sensitive nAb p60.12
Descriptor: Capsid protein, Fab_p60.12-HC, Fab_p60.12-LC
Authors:Ssebyatika, G, Krey, T.
Deposit date:2023-06-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.072 Å)
Cite:A novel class of broadly neutralizing hepatitis E virus-specific human antibodies
To Be Published
8PMX
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rat HEV P domain in complex with glycan-sensitive nAb p60.12
Descriptor: Fab p60.12-HC, Fab p60.12-LC, Pro-secreted protein ORF2
Authors:Ssebyatika, G, Krey, T.
Deposit date:2023-06-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (3.922 Å)
Cite:A novel class of broadly neutralizing hepatitis E virus-specific human antibodies
To Be Published
8PMZ
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BU of 8pmz by Molmil
HEV gt3 P domain in complex with glycan-insensitive nAb p61.15
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Pro-secreted protein ORF2, scFv_p61.15
Authors:Ssebyatika, G, Krey, T.
Deposit date:2023-06-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.912 Å)
Cite:A novel class of broadly neutralizing hepatitis E virus-specific human antibodies
To Be Published
8PMW
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HEV gt3 P domain in complex with glycan-sensitive nAb p60.1
Descriptor: ACETATE ION, Capsid protein, SULFATE ION, ...
Authors:Ssebyatika, G, Krey, T.
Deposit date:2023-06-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A novel class of broadly neutralizing hepatitis E virus-specific human antibodies
To Be Published
8PMY
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BU of 8pmy by Molmil
HEV gt3 P domain in complex with glycan-insensitive nAb p60.15
Descriptor: Capsid protein, ZINC ION, scFv_p60.15
Authors:Ssebyatika, G, Krey, T.
Deposit date:2023-06-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:A novel class of broadly neutralizing hepatitis E virus-specific human antibodies
To Be Published
8QKE
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BU of 8qke by Molmil
PvSub1 Catalytic Domain in Complex with Peptidomimetic Inhibitor (MH-13)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Peptidomimetic Inhibitor (MH-13), ...
Authors:Batista, F.A, Martinez, M, Bouillon, A, Mechaly, A, Alzari, P.M, Haouz, A, Barale, J.C.
Deposit date:2023-09-15
Release date:2024-03-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Insights from structure-activity relationships and the binding mode of peptidic alpha-ketoamide inhibitors of the malaria drug target subtilisin-like SUB1.
Eur.J.Med.Chem., 269, 2024
8QKG
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PvSub1 Catalytic Domain in Complex with Peptidomimetic Inhibitor (MAM-125)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Peptidomimetic Inhibitor (MAM-125), ...
Authors:Batista, F.A, Martinez, M, Bouillon, A, Mechaly, A, Alzari, P.M, Haouz, A, Barale, J.C.
Deposit date:2023-09-15
Release date:2024-03-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.538 Å)
Cite:Insights from structure-activity relationships and the binding mode of peptidic alpha-ketoamide inhibitors of the malaria drug target subtilisin-like SUB1.
Eur.J.Med.Chem., 269, 2024
8QKJ
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BU of 8qkj by Molmil
PvSub1 Catalytic Domain in Complex with Peptidomimetic Inhibitor (MAM-133)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Peptidomimetic Inhibitor (MAM-133), ...
Authors:Batista, F.A, Martinez, M, Bouillon, A, Mechaly, A, Alzari, P.M, Haouz, A, Barale, J.C.
Deposit date:2023-09-15
Release date:2024-03-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.767 Å)
Cite:Insights from structure-activity relationships and the binding mode of peptidic alpha-ketoamide inhibitors of the malaria drug target subtilisin-like SUB1.
Eur.J.Med.Chem., 269, 2024
7KEI
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BU of 7kei by Molmil
DQA1*01:02/DQB1*06:02 in complex with a hemagglutinin peptide from the H1N1 pandemic flu virus.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HA peptide from 2009 H1N1 pandemic flu virus., ...
Authors:Birtley, J.R, Stern, L.J, Mellins, E.D, Jiang, W.
Deposit date:2020-10-10
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of DQA1*01:02/DQB1*06:02 in complex with a flu peptide.
To Be Published
8QH0
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BU of 8qh0 by Molmil
Crystal structure of the SARS-CoV-2 RBD with the antibody Cv2.3194
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cv2.3194 Heavy chain, GLYCEROL, ...
Authors:Fernandez, I, Rey, F.A.
Deposit date:2023-09-06
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:A broadly neutralizing antibody against SARS-CoV-2 Omicron variants
To Be Published
6WML
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BU of 6wml by Molmil
Human TLR8 bound to the potent agonist, GS-9688 (Selgantolimod)
Descriptor: (2R)-2-[(2-amino-7-fluoropyrido[3,2-d]pyrimidin-4-yl)amino]-2-methylhexan-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ...
Authors:Appleby, T.C, Perry, J.K, Mish, M, Villasenor, A.G, Mackman, R.L.
Deposit date:2020-04-21
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of GS-9688 (Selgantolimod) as a Potent and Selective Oral Toll-Like Receptor 8 Agonist for the Treatment of Chronic Hepatitis B.
J.Med.Chem., 63, 2020
7LCY
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BU of 7lcy by Molmil
Crystal structure of the ligand-free ARM domain from Drosophila SARM1
Descriptor: Isoform B of NAD(+) hydrolase sarm1
Authors:Gu, W, Nanson, J.D, Luo, Z, McGuinness, H.Y, Manik, M.K, Jia, X, Ve, T, Kobe, B.
Deposit date:2021-01-12
Release date:2021-03-10
Last modified:2021-04-21
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:SARM1 is a metabolic sensor activated by an increased NMN/NAD + ratio to trigger axon degeneration.
Neuron, 109, 2021
7LCZ
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BU of 7lcz by Molmil
Crystal structure of the ARM domain from Drosophila SARM1 in complex with NMN
Descriptor: 1,2-ETHANEDIOL, BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, Isoform B of NAD(+) hydrolase sarm1, ...
Authors:Gu, W, Nanson, J.D, Luo, Z, Jia, X, Manik, M.K, Ve, T, Kobe, B.
Deposit date:2021-01-12
Release date:2021-03-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:SARM1 is a metabolic sensor activated by an increased NMN/NAD + ratio to trigger axon degeneration.
Neuron, 109, 2021
8R1X
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BU of 8r1x by Molmil
Solution structure and chemical shift assignments for HMG-D Y12F mutant complexed to a 14:12 dA2 bulge DNA
Descriptor: DNA (5'-D(*CP*GP*AP*TP*AP*TP*TP*AP*AP*GP*AP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*TP*CP*AP*AP*TP*AP*TP*CP*G)-3'), High mobility group protein D
Authors:Yang, J.C, Hill, G.R, Neuhaus, D.
Deposit date:2023-11-02
Release date:2024-09-11
Method:SOLUTION NMR
Cite:A Single Interfacial Point Mutation Rescues Solution Structure Determination of the Complex of HMG-D with a DNA Bulge.
Chembiochem, 2024
8SLB
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BU of 8slb by Molmil
X-ray structure of CorA N-terminal domain in complex with conformation-specific synthetic antibody C12
Descriptor: CHLORIDE ION, Cobalt/magnesium transport protein CorA, sAB C12 Heavy Chain, ...
Authors:Dominik, P.K, Erramilli, S.K, Reddy, B.G, Kossiakoff, A.A.
Deposit date:2023-04-21
Release date:2023-06-07
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Conformation-specific Synthetic Antibodies Discriminate Multiple Functional States of the Ion Channel CorA.
J.Mol.Biol., 435, 2023
6WTB
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BU of 6wtb by Molmil
Sort-Tagged Drosophila Cryptochrome
Descriptor: Cryptochrome-1, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
Authors:Schneps, C.M, Crane, B.R.
Deposit date:2020-05-02
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Tuning flavin environment to detect and control light-induced conformational switching in Drosophila cryptochrome.
Commun Biol, 4, 2021
6X38
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BU of 6x38 by Molmil
Crystal structure of the FN5 domain of Drosophila Lar
Descriptor: Tyrosine-protein phosphatase Lar, ZINC ION
Authors:Bouyain, S, Kawakami, J.E.
Deposit date:2020-05-21
Release date:2021-05-26
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Complex protein interactions mediate Drosophila Lar function in muscle tissue.
Plos One, 17, 2022
6XRO
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BU of 6xro by Molmil
Crystal structure of GlpG in complex with peptide boronate inhibitor, Ac-KRFRSMQYSA-B(OH)2
Descriptor: CHLORIDE ION, Rhomboid protease GlpG, SODIUM ION, ...
Authors:Urban, S, Cho, S.
Deposit date:2020-07-13
Release date:2020-09-16
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
7LXK
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BU of 7lxk by Molmil
Ara h 1 leader sequence, Ara h 1.0101 (25-83) A25G
Descriptor: Allergen Ara h 1, clone P41B
Authors:Mueller, G, London, R.
Deposit date:2021-03-03
Release date:2022-03-09
Last modified:2023-03-22
Method:SOLUTION NMR
Cite:Structure, Immunogenicity, and IgE Cross-Reactivity among Walnut and Peanut Vicilin-Buried Peptides.
J.Agric.Food Chem., 70, 2022
8S0L
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BU of 8s0l by Molmil
Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Nanobody A07, ...
Authors:Duquerroy, S, Fernandez, I, Rey, F.
Deposit date:2024-02-14
Release date:2024-06-26
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of TMPRSS2 zymogen activation and recognition by the HKU1 seasonal coronavirus.
Cell, 187, 2024

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PDB entries from 2024-09-25

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