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6IRZ
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BU of 6irz by Molmil
Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH and m7G-capped RNA
Descriptor: 1,2-ETHANEDIOL, 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE, PDX1 C-terminal-inhibiting factor 1, ...
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-15
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
6RGJ
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BU of 6rgj by Molmil
Photorhabdus asymbiotica lectin PHL in complex with D-glucose
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lectin PHL, ...
Authors:Houser, J, Fujdiarova, E, Jancarikova, G, Wimmerova, M.
Deposit date:2019-04-16
Release date:2020-07-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Heptabladed beta-propeller lectins PLL2 and PHL from Photorhabdus spp. recognize O-methylated sugars and influence the host immune system.
Febs J., 288, 2021
3KYK
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BU of 3kyk by Molmil
Crystal structure of li33 Igg1 Fab
Descriptor: Heavy Chain Li33 IgG1, Light Chain Li33 IgG1, SULFATE ION
Authors:Silvian, L.F, Pepinsky, R.B, Walus, L.
Deposit date:2009-12-06
Release date:2010-03-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Improving the solubility of anti-LINGO-1 monoclonal antibody Li33 by isotype switching and targeted mutagenesis.
Protein Sci., 19, 2010
8A5U
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BU of 8a5u by Molmil
Crystal structure of the beta3 subunit extracellular domain of nicotinic acetylcholine receptor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, BICINE, ...
Authors:Giastas, P, Zouridakis, M.
Deposit date:2022-06-16
Release date:2022-08-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Insights into the Role of beta 3 nAChR Subunit in the Activation of Nicotinic Receptors.
Molecules, 27, 2022
6IVO
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BU of 6ivo by Molmil
Crystal structure of a membrane protein P208A
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Kittredge, A, Fukuda, F, Zhang, Y, Yang, T.
Deposit date:2018-12-04
Release date:2019-11-06
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Dual Ca2+-dependent gates in human Bestrophin1 underlie disease-causing mechanisms of gain-of-function mutations.
Commun Biol, 2, 2019
5FPW
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BU of 5fpw by Molmil
proCathepsin B S9 from Trypanosoma congolense
Descriptor: PRO CATHEPSIN B S9
Authors:Sevajol, M, Biteau, N, Baltz, T, Franzetti, B, Vellieux, F.M.D.
Deposit date:2015-12-03
Release date:2016-02-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:2.1 Angstrom Crystal Structure of Pro Cathepsin B S9 from Trypanosoma Congolense
Ph D Thesis
5AZ0
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BU of 5az0 by Molmil
Crystal structure of aldo-keto reductase (AKR2E5) of the silkworm, Bombyx mori
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Yamamoto, K, Higashiura, A, Suzuki, M, Nakagawa, A.
Deposit date:2015-09-15
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
6FUM
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BU of 6fum by Molmil
F11 T-Cell Receptor Recognising PKYVKQNTLKLAT Peptide Presented by HLA-DR*0101
Descriptor: 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, Human F11 T-Cell Receptor alpha chain, ...
Authors:Rizkallah, P.J, Cole, D.K.
Deposit date:2018-02-27
Release date:2018-04-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:In Silicoand Structural Analyses Demonstrate That Intrinsic Protein Motions Guide T Cell Receptor Complementarity Determining Region Loop Flexibility.
Front Immunol, 9, 2018
6I72
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BU of 6i72 by Molmil
Structure of Fragaria ananassa O-methyltransferase in complex with S-adenosylhomocysteine and caffeic acid
Descriptor: 1,2-ETHANEDIOL, CAFFEIC ACID, O-methyltransferase, ...
Authors:Heldner, A, Schiefner, A.
Deposit date:2018-11-15
Release date:2019-11-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural insights into enzymatic formation of the strawberry flavor compound 2,5-dimethyl-4-methoxy-3(2H)-furanone
To Be Published
6G4R
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BU of 6g4r by Molmil
Corynebacterium glutamicum OxyR C206S mutant, H2O2-bound
Descriptor: 1,2-ETHANEDIOL, HYDROGEN PEROXIDE, Hydrogen peroxide-inducible genes activator, ...
Authors:Young, D.R, Pedre, B.P, Messens, J.M.
Deposit date:2018-03-28
Release date:2018-12-05
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural snapshots of OxyR reveal the peroxidatic mechanism of H2O2sensing.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
9NSR
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BU of 9nsr by Molmil
Crystal structure of bifunctional farnesyl/geranylgeranyl pyrophosphate synthase (FPPS/GGPPS) from Plasmodium falciparum in complex with MMV019313
Descriptor: Bifunctional farnesyl/geranylgeranyl diphosphate synthase, N-[3-(azepan-1-yl)propyl]-5-methyl-4-oxo-4,5-dihydrothieno[3,2-c]quinoline-2-carboxamide
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2025-03-17
Release date:2025-03-26
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structure of bifunctional farnesyl/geranylgeranyl pyrophosphate synthase (FPPS/GGPPS) from Plasmodium falciparum in complex with MMV019313
To be published
5INP
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BU of 5inp by Molmil
Mouse Tdp2 reaction product (5'-phosphorylated DNA)-Mn2+ complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3'), MANGANESE (II) ION, ...
Authors:Schellenberg, M.J, Williams, R.S.
Deposit date:2016-03-07
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.947 Å)
Cite:Reversal of DNA damage induced Topoisomerase 2 DNA-protein crosslinks by Tdp2.
Nucleic Acids Res., 44, 2016
6G8Y
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BU of 6g8y by Molmil
Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the Golgin GM130
Descriptor: 1,2-ETHANEDIOL, Acetylated cis-Golgi protein, involved in ER-to-Golgi transport, ...
Authors:Jurk, C.M, Roske, Y, Heinemann, U.
Deposit date:2018-04-10
Release date:2019-04-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures of the Single PDZ Domains from GRASP65 and their Interaction with the Golgin GM130
Croatica Chemica Acta, 2018
5AZ1
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BU of 5az1 by Molmil
Crystal structure of aldo-keto reductase (AKR2E5) complexed with NADPH
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Yamamoto, K, Higashiura, A, Suzuki, M, Nakagawa, A.
Deposit date:2015-09-15
Release date:2016-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of an aldo-keto reductase (AKR2E5) from the silkworm Bombyx mori
Biochem.Biophys.Res.Commun., 474, 2016
7L7A
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BU of 7l7a by Molmil
Solution Structure of NuxVA
Descriptor: NuxVA
Authors:Mari, F, Dovell, S.
Deposit date:2020-12-28
Release date:2021-01-13
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Conus venom fractions inhibit the adhesion of Plasmodium falciparum erythrocyte membrane protein 1 domains to the host vascular receptors.
J Proteomics, 234, 2020
5YWU
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BU of 5ywu by Molmil
Crystal structure of TREX1 in complex with a inosine contained dsDNA
Descriptor: INOSINE CONTAINED DSDNAS, MAGNESIUM ION, Three-prime repair exonuclease 1
Authors:Hsiao, Y.Y.
Deposit date:2017-11-30
Release date:2018-05-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural basis for overhang excision and terminal unwinding of DNA duplexes by TREX1
PLoS Biol., 16, 2018
5C2I
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BU of 5c2i by Molmil
Crystal structure of Anabaena sp. DyP-type peroxidese (AnaPX)
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Alr1585 protein, ...
Authors:Yoshida, T, Amano, Y, Tsuge, H, Sugano, Y.
Deposit date:2015-06-16
Release date:2015-12-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Anabaena sp. DyP-type peroxidase is a tetramer consisting of two asymmetric dimers.
Proteins, 84, 2016
5TR9
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BU of 5tr9 by Molmil
Crystal Structure of a ferredoxin NADP+ reductase from Neisseria gonorrhoeae with bound FAD
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-10-25
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of a ferredoxin NADP+ reductase from Neisseria gonorrhoeae with bound FAD
to be published
6FZQ
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BU of 6fzq by Molmil
Crystal structure of scFv-SM3 in complex with compound 3
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-2-[(difluoroacetyl)amino]-alpha-D-galactopyranose, Mucin-1, ...
Authors:Bermejo, I.A, Usabiaga, I, Companon, I, Castro-Lopez, J, Insausti, A, Fernandez, J.A, Avenoza, A, Busto, J.H, Jimenez-Barbero, J, Asensio, J.L, Jimenez-Oses, G, Peregrina, J.M, Hurtado-Guerrero, R, Cocinero, E.J, Corzana, F.
Deposit date:2018-03-15
Release date:2019-02-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Water Sculpts the Distinctive Shapes and Dynamics of the Tumor-Associated Carbohydrate Tn Antigens: Implications for Their Molecular Recognition.
J.Am.Chem.Soc., 140, 2018
5BOS
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BU of 5bos by Molmil
Structure of Acetobacter aceti PurE-S57C, partly oxidized form
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Sullivan, K.L, Kappock, T.J.
Deposit date:2015-05-27
Release date:2016-06-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.712 Å)
Cite:Mutation of the conserved serine in two PurE classes
To Be Published
6UFU
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BU of 6ufu by Molmil
C2 symmetric peptide design number 1, Zappy, crystal form 1
Descriptor: C2-1, Zappy, crystal form 1
Authors:Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D.
Deposit date:2019-09-25
Release date:2020-12-02
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (1.101 Å)
Cite:Computational design of mixed chirality peptide macrocycles with internal symmetry.
Protein Sci., 29, 2020
1F27
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BU of 1f27 by Molmil
CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT
Descriptor: BIOTIN, MAGNESIUM ION, RNA (5'-R(*AP*AP*AP*AP*AP*GP*UP*CP*CP*UP*C)-3'), ...
Authors:Nix, J, Sussman, D, Wilson, C.
Deposit date:2000-05-23
Release date:2000-06-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The 1.3 A crystal structure of a biotin-binding pseudoknot and the basis for RNA molecular recognition.
J.Mol.Biol., 296, 2000
7KZC
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BU of 7kzc by Molmil
Potent SARS-CoV-2 binding and neutralization through maturation of iconic SARS-CoV-1antibodies
Descriptor: CHLORIDE ION, Fab heavy chain of m396-B10 antibody, Fab light chain of m396-B10 antibody
Authors:Langley, D.B, Christ, D.
Deposit date:2020-12-10
Release date:2021-02-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Potent SARS-CoV-2 binding and neutralization through maturation of iconic SARS-CoV-1 antibodies.
Mabs, 13
7KKV
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BU of 7kkv by Molmil
Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (native, crystal form I)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, ...
Authors:Yang, Y, Breaker, R.R.
Deposit date:2020-10-28
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
5BOR
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BU of 5bor by Molmil
Structure of Acetobacter aceti PurE-S57C, sulfonate form
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Sullivan, K.L, Kappock, T.J.
Deposit date:2015-05-27
Release date:2016-06-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mutation of the conserved serine in two PurE classes
To Be Published

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