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4WMA
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BU of 4wma by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with manganese,acceptor ligand and UDP-Glucose
Descriptor: Coagulation factor IX, MANGANESE (II) ION, SULFATE ION, ...
Authors:Yu, H, Li, H.
Deposit date:2014-10-08
Release date:2015-09-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
8OTQ
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BU of 8otq by Molmil
Cryo-EM structure of Strongylocentrotus purpuratus sperm-specific Na+/H+ exchanger SLC9C1 in GDN
Descriptor: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, PALMITIC ACID, Sperm-specific sodium proton exchanger
Authors:Yeo, H, Mehta, V, Gulati, A, Drew, D.
Deposit date:2023-04-21
Release date:2023-11-01
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structure and electromechanical coupling of a voltage-gated Na + /H + exchanger.
Nature, 623, 2023
6VN3
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BU of 6vn3 by Molmil
USP7 IN COMPLEX WITH LIGAND COMPOUND 23
Descriptor: 1-{[7-(5-chloro-2-{[(3R,4S)-4-fluoropyrrolidin-3-yl]oxy}-3-methylphenyl)thieno[3,2-b]pyridin-2-yl]methyl}-1H-pyrrole-2,5-dione, Ubiquitin carboxyl-terminal hydrolase 7
Authors:Leger, P.R, Wustrow, D.J, Hu, D.X, Krapp, S, Maskos, K, Blaesse, M.
Deposit date:2020-01-29
Release date:2020-04-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Inhibitors of USP7 with In Vivo Antitumor Activity.
J.Med.Chem., 63, 2020
4WV9
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BU of 4wv9 by Molmil
Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with click chemistry compound (3-exo)-8,8-dimethyl-3-[4-(pyridin-4-yl)-1H-1,2,3-triazol-1-yl]-8-azoniabicyclo[3.2.1]octane
Descriptor: (3-exo)-8,8-dimethyl-3-[4-(pyridin-4-yl)-1H-1,2,3-triazol-1-yl]-8-azoniabicyclo[3.2.1]octane, Soluble acetylcholine receptor
Authors:Talley, T.T, Bobango, J, Wu, J.M, Sankaran, B.
Deposit date:2014-11-04
Release date:2015-04-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with click chemistry compound.
To Be Published
8P1X
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BU of 8p1x by Molmil
TarM(Se)_G117R-UDP-glucose
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Guo, Y, Stehle, T.
Deposit date:2023-05-13
Release date:2023-12-06
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Invasive Staphylococcus epidermidis uses a unique processive wall teichoic acid glycosyltransferase to evade immune recognition.
Sci Adv, 9, 2023
6VLM
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BU of 6vlm by Molmil
Core Catalytic Domain of HIV Integrase in complex with virtual screening hit
Descriptor: Integrase, [3-(4-chlorophenyl)[1,3]thiazolo[3,2-a]benzimidazol-2-yl]acetic acid
Authors:Klein, D.J, Sanders, J.M.
Deposit date:2020-01-24
Release date:2020-05-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Augmenting Hit Identification by Virtual Screening Techniques in Small Molecule Drug Discovery.
J.Chem.Inf.Model., 60, 2020
6VJB
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BU of 6vjb by Molmil
Crystal structure of a catalytically inactive CXC Chemokine-degrading protease SpyCEP from Streptococcus pyogenes
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Putative cell envelope proteinase
Authors:Malito, E, Rouse, S.
Deposit date:2020-01-15
Release date:2020-04-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure, dynamics and immunogenicity of a catalytically inactive CXC chemokine-degrading protease SpyCEP from Streptococcus pyogenes.
Comput Struct Biotechnol J, 18, 2020
4WM0
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BU of 4wm0 by Molmil
Crystal structure of mouse Xyloside xylosyltransferase 1 complexed with acceptor ligand
Descriptor: Coagulation factor IX, Xyloside xylosyltransferase 1, alpha-D-xylopyranose-(1-3)-beta-D-glucopyranose
Authors:Yu, H, Li, H.
Deposit date:2014-10-08
Release date:2015-09-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Notch-modifying xylosyltransferase structures support an SNi-like retaining mechanism.
Nat.Chem.Biol., 11, 2015
6VJJ
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BU of 6vjj by Molmil
Crystal Structure of wild-type KRAS4b (GMPPNP-bound) in complex with RAS-binding domain (RBD) of RAF1/CRAF
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Tran, T.H, Dharmaiah, S, Simanshu, D.K.
Deposit date:2020-01-16
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation.
Nat Commun, 12, 2021
8AJ7
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BU of 8aj7 by Molmil
Kunitz domain of Amblyomin-X
Descriptor: 1,2-ETHANEDIOL, Kunitz domain of Amblyomin-X
Authors:Ciccone, L, Servent, D, Stura, E.A.
Deposit date:2022-07-27
Release date:2023-02-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional properties of the Kunitz-type and C-terminal domains of Amblyomin-X supporting its antitumor activity.
Front Mol Biosci, 10, 2023
6MXF
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BU of 6mxf by Molmil
MicroED structure of thiostrepton at 1.9 A resolution
Descriptor: Thiostrepton
Authors:Jones, C.G, Martynowycz, M.W, Hattne, J, Fulton, T, Stoltz, B.M, Rodriguez, J.A, Nelson, H.M, Gonen, T.
Deposit date:2018-10-30
Release date:2018-11-21
Last modified:2023-11-15
Method:ELECTRON CRYSTALLOGRAPHY (1.91 Å)
Cite:The CryoEM Method MicroED as a Powerful Tool for Small Molecule Structure Determination.
ACS Cent Sci, 4, 2018
4X5Y
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BU of 4x5y by Molmil
Menin in complex with MI-503
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-methyl-1-(1H-pyrazol-4-ylmethyl)-5-[(4-{[6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidin-4-yl]amino}piperidin-1-yl)methyl]-1H-indole-2-carbonitrile, ...
Authors:Pollock, J, Borkin, D, Cierpicki, T, Grembecka, J.
Deposit date:2014-12-06
Release date:2015-04-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Pharmacologic Inhibition of the Menin-MLL Interaction Blocks Progression of MLL Leukemia In Vivo.
Cancer Cell, 27, 2015
7S6F
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BU of 7s6f by Molmil
Crystal structure of UrtA1 from Synechococcus WH8102 in complex with urea and calcium
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Putative urea ABC transporter, ...
Authors:Shah, B.S, Mikolajek, H, Orr, C.M, Mykhaylyk, V, Owens, R.J, Paulsen, I.T.
Deposit date:2021-09-14
Release date:2021-10-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of UrtA1 from Synechococcus WH8102 in complex with urea and calcium
To Be Published
4QOA
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BU of 4qoa by Molmil
Crystal structure of a putative periplasmic protein (BACUNI_04550) from Bacteroides uniformis ATCC 8492 at 2.75 A resolution
Descriptor: 1,2-ETHANEDIOL, Putative periplasmic protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-06-19
Release date:2014-07-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of a putative periplasmic protein (BACUNI_04550) from Bacteroides uniformis ATCC 8492 at 2.75 A resolution
To be published
6VU2
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BU of 6vu2 by Molmil
M1214_N1 Fab structure
Descriptor: M1214 N1 Fab heavy chain, M1214 N1 Fab light chain
Authors:Pan, R, Kong, X.
Deposit date:2020-02-14
Release date:2020-05-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:VSV-Displayed HIV-1 Envelope Identifies Broadly Neutralizing Antibodies Class-Switched to IgG and IgA.
Cell Host Microbe, 27, 2020
6W46
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BU of 6w46 by Molmil
Valine-Containing Collagen Peptide
Descriptor: 1,2-ETHANEDIOL, Collagen-like peptide
Authors:Chenoweth, D.M, Melton, S.D.
Deposit date:2020-03-10
Release date:2020-08-12
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Rules for the design of aza-glycine stabilized triple-helical collagen peptides.
Chem Sci, 11, 2020
4WFB
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BU of 4wfb by Molmil
The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 23S rRNA, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Eyal, Z, Matzov, D, Krupkin, M, Wekselman, I, Zimmerman, E, Rozenberg, H, Bashan, A, Yonath, A.E.
Deposit date:2014-09-14
Release date:2015-10-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.43 Å)
Cite:Structural insights into species-specific features of the ribosome from the pathogen Staphylococcus aureus.
Proc.Natl.Acad.Sci.USA, 112, 2015
5JWZ
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BU of 5jwz by Molmil
Structure of a Putative Xyloglucanase from the Cellulolytic Bacteria Streptomyces sp. SirexAA-E
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cellulose-binding family II
Authors:Kositzke, A.W, Bianchetti, C.M.
Deposit date:2016-05-12
Release date:2016-06-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structure of a Putative Xyloglucanase from the Cellulolytic Bacteria Streptomyces sp. SirexAA-E, secreted, biomass degradation
To Be Published
6W34
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BU of 6w34 by Molmil
Crystal Structure of Class A Beta-lactamase from Bacillus cereus
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Kim, Y, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-03-08
Release date:2020-03-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of Class A Beta-lactamase from Bacillus cereus
To Be Published
6TIV
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BU of 6tiv by Molmil
Crystal structure of the SVS_A2 protein (205-DREMH-209 /205-AQDLE-209 mutant) from ancestral sequence reconstruction at 2.38 A resolution
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, SVS variant AT2, ...
Authors:Rudraraju, R, Schnell, R, Schneider, G.
Deposit date:2019-11-22
Release date:2020-12-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Engineering of Ancestors as a Tool to Elucidate Structure, Mechanism, and Specificity of Extant Terpene Cyclase.
J.Am.Chem.Soc., 143, 2021
8WN5
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BU of 8wn5 by Molmil
Crystal structure of GH1 beta-glucosidase Td2F2 E352Q glucose complex
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, MALONIC ACID, beta-D-glucopyranose, ...
Authors:Lin, C.C, Lu, T.J, Fushinobu, S.
Deposit date:2023-10-05
Release date:2025-01-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural Basis for Specific Hydrolysis and Synthesis of beta-1-2-glucosidic linkage by Glucose-tolerant beta-glucosidase Td2F2
To be published
8IZG
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BU of 8izg by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A1 in complex with 5-HMBPP
Descriptor: 1,2-ETHANEDIOL, Butyrophilin subfamily 3 member A1, DI(HYDROXYETHYL)ETHER, ...
Authors:Yang, Y.Y, Yi, S.M, Huang, J.W, Chen, C.C, Guo, R.T.
Deposit date:2023-04-07
Release date:2023-09-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells.
Nature, 621, 2023
4WMR
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BU of 4wmr by Molmil
STRUCTURE OF MCL1 BOUND TO BRD inhibitor ligand 1 AT 1.7A
Descriptor: 7-[2-(1H-imidazol-1-yl)-4-methylpyridin-3-yl]-3-[3-(naphthalen-1-yloxy)propyl]-1-[2-oxo-2-(piperazin-1-yl)ethyl]-1H-indole-2-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1, PYROPHOSPHATE 2-, ...
Authors:CLIFTON, M.C, EDWARDS, T.E.
Deposit date:2014-10-09
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Maltose-Binding Protein Fusion Construct Yields a Robust Crystallography Platform for MCL1.
Plos One, 10, 2015
7KBW
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BU of 7kbw by Molmil
Solution structure of the major MYC promoter G-quadruplex with a wild-type flanking in complex with NSC85697, a quinoline derivative
Descriptor: 2-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]-1-methyl-quinoline-4-carboxamide, Myc2345
Authors:Dickerhoff, J, Yang, D.
Deposit date:2020-10-03
Release date:2021-06-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
6W08
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BU of 6w08 by Molmil
Crystal Structure of Motility Associated Killing Factor E from Vibrio cholerae
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Kim, Y, Jedrzejczak, R, Joachimiak, G, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-02-29
Release date:2020-03-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A Genomic Island of Vibrio cholerae Encodes a Three-Component Cytotoxin with Monomer and Protomer Forms Structurally Similar to Alpha-Pore-Forming Toxins.
J.Bacteriol., 204, 2022

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