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PDB: 43 results

8Y3R
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BU of 8y3r by Molmil
ASFV p72 in complex with Fab H3
Descriptor: B646L, Heavy chain of H3, Light chain of H3
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-01-29
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
6ONM
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BU of 6onm by Molmil
Crystal Structure of (+)-Limonene Synthase Complexed with 8,9-Difluorolinalyl Diphosphate
Descriptor: (+)-limonene synthase, (3R)-8-fluoro-7-(fluoromethyl)-3-methylocta-1,6-dien-3-yl trihydrogen diphosphate, MANGANESE (II) ION
Authors:Prem Kumar, R, Morehouse, B.R, Yu, Q, Oprian, D.D.
Deposit date:2019-04-22
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Direct Evidence of an Enzyme-Generated LPP Intermediate in (+)-Limonene Synthase Using a Fluorinated GPP Substrate Analog.
Acs Chem.Biol., 14, 2019
4EQ8
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BU of 4eq8 by Molmil
Crystal structure of PA1844 from Pseudomonas aeruginosa PAO1
Descriptor: GLYCEROL, Putative uncharacterized protein
Authors:Shang, G, Li, N, Zhang, J, Lu, D, Yu, Q, Zhao, Y, Liu, X, Xu, S, Gu, L.
Deposit date:2012-04-18
Release date:2012-09-12
Last modified:2013-07-24
Method:X-RAY DIFFRACTION (1.392 Å)
Cite:Structural insight into how Pseudomonas aeruginosa peptidoglycanhydrolase Tse1 and its immunity protein Tsi1 function.
Biochem.J., 448, 2012
4DGK
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BU of 4dgk by Molmil
Crystal structure of Phytoene desaturase CRTI from Pantoea ananatis
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Phytoene dehydrogenase
Authors:Schaub, P, Yu, Q, Gemmecker, S, Poussin-Courmontagne, P, Mailliot, J, McEwen, A.G, Ghisla, S, Beyer, P, Cavarelli, J.
Deposit date:2012-01-26
Release date:2012-10-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:On the structure and function of the phytoene desaturase CRTI from Pantoea ananatis, a membrane-peripheral and FAD-dependent oxidase/isomerase.
Plos One, 7, 2012
3R2W
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BU of 3r2w by Molmil
Crystal Structure of UDP-glucose Pyrophosphorylase of Homo Sapiens
Descriptor: UTP--glucose-1-phosphate uridylyltransferase
Authors:Zheng, X, Yu, Q.
Deposit date:2011-03-14
Release date:2012-02-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The crystal structure of human UDP-glucose pyrophosphorylase reveals a latch effect that influences enzymatic activity.
Biochem.J., 442, 2012
4EQA
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Crystal structure of PA1844 in complex with PA1845 from Pseudomonas aeruginosa PAO1
Descriptor: Putative uncharacterized protein
Authors:Shang, G, Li, N, Zhang, J, Lu, D, Yu, Q, Zhao, Y, Liu, X, Xu, S, Gu, L.
Deposit date:2012-04-18
Release date:2012-09-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insight into how Pseudomonas aeruginosa peptidoglycanhydrolase Tse1 and its immunity protein Tsi1 function.
Biochem.J., 448, 2012
4F5Y
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BU of 4f5y by Molmil
Crystal structure of human STING CTD complex with C-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CALCIUM ION, Transmembrane protein 173
Authors:Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP
Nat.Struct.Mol.Biol., 19, 2012
4F5W
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Crystal structure of ligand free human STING CTD
Descriptor: CALCIUM ION, Transmembrane protein 173
Authors:Gu, L, Shang, G, Zhu, D, Li, N, Zhang, J, Zhu, C, Lu, D, Liu, C, Yu, Q, Zhao, Y, Xu, S.
Deposit date:2012-05-13
Release date:2012-06-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Crystal structures of STING protein reveal basis for recognition of cyclic di-GMP
Nat.Struct.Mol.Biol., 19, 2012
3R3I
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BU of 3r3i by Molmil
Crystal Structure of C-terminal truncation of UDP-glucose Pyrophosphorylase of Homo sapiens
Descriptor: UTP--glucose-1-phosphate uridylyltransferase
Authors:Zheng, X, Yu, Q.
Deposit date:2011-03-15
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.57 Å)
Cite:Crystal Structure of UDP-glucose Pyrophosphorylase of Homo sapiens
To be Published
7KL5
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BU of 7kl5 by Molmil
Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues: Phe4246 to Val4271
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin-1, ...
Authors:Fisher, A.J, Ames, J.B, Yu, Q.
Deposit date:2020-10-29
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Crystal Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues Phe4246-Val4271 Reveals a Fifth Calcium Binding Site.
Biochemistry, 60, 2021
5FX5
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BU of 5fx5 by Molmil
Novel inhibitors of human rhinovirus 3C protease
Descriptor: GLYCEROL, RHINOVIRUS 3C PROTEASE, TETRAETHYLENE GLYCOL, ...
Authors:Kawatkar, S, Ek, M, Hoesch, V, Gagnon, M, Nilsson, E, Lister, T, Olsson, L, Patel, J, Yu, Q.
Deposit date:2016-02-24
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design and Structure-Activity Relationships of Novel Inhibitors of Human Rhinovirus 3C Protease.
Bioorg.Med.Chem.Lett., 26, 2016
5FX6
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BU of 5fx6 by Molmil
Novel inhibitors of human rhinovirus 3C protease
Descriptor: RHINOVIRUS 3C PROTEASE, ethyl (4R)-4-[[(2S,4S)-1-[(2S)-3-methyl-2-[(5-methyl-1,2-oxazol-3-yl)carbonylamino]butanoyl]-4-phenyl-pyrrolidin-2-yl]carbonylamino]-5-[(3S)-2-oxidanylidenepyrrolidin-3-yl]pentanoate
Authors:Kawatkar, S, Ek, M, Hoesch, V, Gagnon, M, Nilsson, E, Lister, T, Olsson, L, Patel, J, Yu, Q.
Deposit date:2016-02-24
Release date:2016-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Design and Structure-Activity Relationships of Novel Inhibitors of Human Rhinovirus 3C Protease.
Bioorg.Med.Chem.Lett., 26, 2016
6BHO
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BU of 6bho by Molmil
Green Light-Absorbing State of NpR6012g4, a Red/Green Cyanobacteriochrome
Descriptor: Methyl-accepting chemotaxis sensory transducer with phytochrome sensor, PHYCOCYANOBILIN
Authors:Lim, S, Yu, Q, Rockwell, N.C, Martin, S.S, Lagarias, J.C, Ames, J.B.
Deposit date:2017-10-31
Release date:2018-04-18
Last modified:2019-12-04
Method:SOLUTION NMR
Cite:Correlating structural and photochemical heterogeneity in cyanobacteriochrome NpR6012g4.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8ZL9
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BU of 8zl9 by Molmil
ASFV p72 in complex with Fab G6
Descriptor: B646L, G6 Heavy chain, G6 Light chain
Authors:Wang, X, Fu, W, Yu, Q.
Deposit date:2024-05-17
Release date:2024-09-18
Method:ELECTRON MICROSCOPY (4.36 Å)
Cite:p72 antigenic mapping reveals a potential supersite of vulnerability for African swine fever virus.
Cell Discov, 10, 2024
8OR1
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BU of 8or1 by Molmil
Co-crystal strucutre of PD-L1 with low molecular weight inhibitor
Descriptor: 5-[[5-[[2-chloranyl-3-(2-fluorophenyl)phenyl]methoxy]-2-[(~{E})-2-hydroxyethyliminomethyl]phenoxy]methyl]pyridine-3-carbonitrile, Programmed cell death 1 ligand 1
Authors:Zhang, H, Zhou, S, Wu, C, Zhu, M, Yu, Q, Wang, X, Awadasseid, A, Plewka, J, Magiera-Mularz, K, Wu, Y, Zhang, W.
Deposit date:2023-04-12
Release date:2023-08-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Design, Synthesis, and Antitumor Activity Evaluation of 2-Arylmethoxy-4-(2,2'-dihalogen-substituted biphenyl-3-ylmethoxy) Benzylamine Derivatives as Potent PD-1/PD-L1 Inhibitors.
J.Med.Chem., 66, 2023
7D88
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BU of 7d88 by Molmil
Crystal structure of a novel thermostable GH10 xylanase XynA
Descriptor: Beta-xylanase, CALCIUM ION
Authors:Xie, W, Yu, Q, Wang, C.
Deposit date:2020-10-07
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.34482026 Å)
Cite:Insights into the Catalytic Mechanism of a Novel XynA and Structure-Based Engineering for Improving Bifunctional Activities.
Biochemistry, 60, 2021
7D89
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Crystal structure of an inactivated double mutant (E182AE280A) of a novel thermostable GH10 xylanase XynA
Descriptor: Beta-xylanase, CALCIUM ION
Authors:Xie, W, Yu, Q, Wang, C.
Deposit date:2020-10-07
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.89384079 Å)
Cite:Insights into the Catalytic Mechanism of a Novel XynA and Structure-Based Engineering for Improving Bifunctional Activities.
Biochemistry, 60, 2021
7BKP
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BU of 7bkp by Molmil
CryoEM structure of disease related M854K MDA5-dsRNA filament in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Interferon-induced helicase C domain-containing protein 1, MAGNESIUM ION, ...
Authors:Singh, R, Herrero del Valle, A, Yu, Q, Modis, Y.
Deposit date:2021-01-16
Release date:2021-11-17
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:MDA5 disease variant M854K prevents ATP-dependent structural discrimination of viral and cellular RNA.
Nat Commun, 12, 2021
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