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PDB: 677 件

4KDD
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Structure of Mycobacterium tuberculosis ribosome recycling factor in presence of detergent
分子名称: CADMIUM ION, DECYL-BETA-D-MALTOPYRANOSIDE, Ribosome-recycling factor
著者Selvaraj, M, Govindan, A, Seshadri, A, Dubey, B, Varshney, U, Vijayan, M.
登録日2013-04-24
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular flexibility of Mycobacterium tuberculosis ribosome recycling factor and its functional consequences: an exploration involving mutants.
J.Biosci., 38, 2013
1WM6
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Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: CHLORIDE ION, phenylacetic acid degradation protein PaaI
著者Sugahara, M, Kunishima, N, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-04
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1WLV
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Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: ACETATE ION, CHLORIDE ION, COENZYME A, ...
著者Kunishima, N, Sugahara, M, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-06-29
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
5Y97
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Crystal structure of snake gourd seed lectin in complex with lactose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Seed lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Chandran, T, Vijayan, M, Sivaji, N, Surolia, A.
登録日2017-08-23
公開日2018-08-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Ligand binding and retention in snake gourd seed lectin (SGSL). A crystallographic, thermodynamic and molecular dynamics study
Glycobiology, 28, 2018
1WLU
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BU of 1wlu by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: CHLORIDE ION, GLYCEROL, phenylacetic acid degradation protein PaaI
著者Kunishima, N, Sugahara, M, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-06-29
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1WN3
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BU of 1wn3 by Molmil
Crystal structure of TT0310 protein from Thermus thermophilus HB8
分子名称: ACETATE ION, CHLORIDE ION, HEXANOYL-COENZYME A, ...
著者Kunishima, N, Sugahara, M, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-27
公開日2005-07-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1J4T
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BU of 1j4t by Molmil
Structure of Artocarpin: a Lectin with Mannose Specificity (Form 2)
分子名称: Artocarpin
著者Pratap, J.V, Jeyaprakash, A.A, Rani, P.G, Sekar, K, Surolia, A, Vijayan, M.
登録日2001-10-30
公開日2002-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-alpha-D-mannose: implications to the generation of carbohydrate specificity.
J.Mol.Biol., 317, 2002
1SFY
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BU of 1sfy by Molmil
Crystal structure of recombinant Erythrina corallodandron Lectin
分子名称: CALCIUM ION, Lectin, MANGANESE (II) ION, ...
著者Kulkarni, K.A, Srivastava, A, Mitra, N, Surolia, A, Vijayan, M, Suguna, K.
登録日2004-02-21
公開日2004-08-10
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Effect of glycosylation on the structure of Erythrina corallodendron lectin.
Proteins, 56, 2004
1HIT
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BU of 1hit by Molmil
Receptor binding redefined by a structural switch in a mutant Human Insulin
分子名称: INSULIN
著者Hua, Q.X, Kochoyan, M, Weiss, M.A.
登録日1992-02-28
公開日1994-01-31
最終更新日2024-06-05
実験手法SOLUTION NMR
主引用文献Receptor binding redefined by a structural switch in a mutant human insulin.
Nature, 354, 1991
5ZRG
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BU of 5zrg by Molmil
M. smegmatis antimutator protein MutT2 in complex with dCMP
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRP
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M. smegmatis antimutator protein MutT2 form 3
分子名称: Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRK
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M. smegmatis antimutator protein MutT2 in complex with dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRI
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M. smegmatis antimutator protein MutT2 in complex with 5m-dCMP
分子名称: MAGNESIUM ION, Putative mutator protein MutT2/NUDIX hydrolase, [(2R,3S,5R)-5-(4-azanyl-5-methyl-pyrimidin-1-ium-1-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRL
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BU of 5zrl by Molmil
M. smegmatis antimutator protein MutT2 in complex with CDP
分子名称: 1,2-ETHANEDIOL, CYTIDINE-5'-DIPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRC
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BU of 5zrc by Molmil
Structural insights into the catalysis mechanism of M. smegmatis antimutator protein MutT2
分子名称: 1,2-ETHANEDIOL, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRH
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BU of 5zrh by Molmil
M. smegmatis antimutator protein MutT2 in complex with CMP
分子名称: 1,2-ETHANEDIOL, CYTIDINE-5'-MONOPHOSPHATE, Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
5ZRO
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M. smegmatis antimutator protein MutT2 in complex with 5mdCTP
分子名称: 1,2-ETHANEDIOL, 2'-DEOXY-5-METHYLCYTIDINE 5'-(TETRAHYDROGEN TRIPHOSPHATE), Putative mutator protein MutT2/NUDIX hydrolase
著者Singh, A, Arif, S.M, Sang, P.B, Varshney, U, Vijayan, M.
登録日2018-04-24
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Structural insights into the specificity and catalytic mechanism of mycobacterial nucleotide pool sanitizing enzyme MutT2.
J.Struct.Biol., 204, 2018
1ULQ
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BU of 1ulq by Molmil
Crystal structure of tt0182 from Thermus thermophilus HB8
分子名称: putative acetyl-CoA acetyltransferase
著者Ago, H, Hamada, K, Ida, K, Kanda, H, Sugahara, M, Yamamoto, M, Kuroishi, C, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-09-16
公開日2004-11-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of tt0182 from Thermus thermophilus HB8
To be Published
1V25
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Crystal structure of tt0168 from Thermus thermophilus HB8
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, long-chain-fatty-acid-CoA synthetase
著者Hisanaga, Y, Ago, H, Nakatsu, T, Hamada, K, Ida, K, Kanda, H, Yamamoto, M, Hori, T, Arii, Y, Sugahara, M, Kuramitsu, S, Yokoyama, S, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-10-07
公開日2004-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of the Substrate-specific Two-step Catalysis of Long Chain Fatty Acyl-CoA Synthetase Dimer
J.Biol.Chem., 279, 2004
1V3U
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Crystal structure of leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase in apo form
分子名称: CHLORIDE ION, leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
著者Hori, T, Yokomizo, T, Ago, H, Sugahara, M, Ueno, G, Yamamoto, M, Kumasaka, T, Shimizu, T, Miyano, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-11-05
公開日2004-07-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of leukotriene B4 12-hydroxydehydrogenase/15-Oxo-prostaglandin 13-reductase catalytic mechanism and a possible Src homology 3 domain binding loop
J.Biol.Chem., 279, 2004
4KAW
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BU of 4kaw by Molmil
Crystal structure of ribosome recycling factor mutant R39G from Mycobacterium tuberculosis
分子名称: CADMIUM ION, Ribosome-recycling factor
著者Selvaraj, M, Govindan, A, Seshadri, A, Dubey, B, Varshney, U, Vijayan, M.
登録日2013-04-23
公開日2014-03-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular flexibility of Mycobacterium tuberculosis ribosome recycling factor and its functional consequences: an exploration involving mutants.
J.Biosci., 38, 2013
4KB2
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Crystal structure of ribosome recycling factor mutant R109A from Mycobacterium tuberculosis
分子名称: CADMIUM ION, Ribosome-recycling factor
著者Selvaraj, M, Govindan, A, Seshadri, A, Dubey, B, Varshney, U, Vijayan, M.
登録日2013-04-23
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular flexibility of Mycobacterium tuberculosis ribosome recycling factor and its functional consequences: an exploration involving mutants.
J.Biosci., 38, 2013
4KC6
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Crystal structure of C-terminal deletion mutant of ribosome recycling factor from Mycobacterium tuberculosis
分子名称: CADMIUM ION, Ribosome-recycling factor
著者Selvaraj, M, Govindan, A, Seshadri, A, Dubey, B, Varshney, U, Vijayan, M.
登録日2013-04-24
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular flexibility of Mycobacterium tuberculosis ribosome recycling factor and its functional consequences: an exploration involving mutants.
J.Biosci., 38, 2013
1J4S
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BU of 1j4s by Molmil
Structure of Artocarpin: a Lectin with Mannose Specificity (Form 1)
分子名称: Artocarpin
著者Pratap, J.V, Jeyaprakash, A.A, Rani, P.G, Sekar, K, Surolia, A, Vijayan, M.
登録日2001-10-30
公開日2002-03-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-alpha-D-mannose: implications to the generation of carbohydrate specificity.
J.Mol.Biol., 317, 2002
1J3N
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Crystal Structure of 3-oxoacyl-(acyl-carrier protein) Synthase II from Thermus thermophilus HB8
分子名称: 3-oxoacyl-(acyl-carrier protein) synthase II, CITRIC ACID, MAGNESIUM ION
著者Bagautdinov, B, Miyano, M, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-02-10
公開日2003-03-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of 3-oxoacyl-(acyl-carrier protein) synthase II from Thermus thermophilus HB8.
Acta Crystallogr.,Sect.F, 64, 2008

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