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PDB: 34735 results

6PKS
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MicroED structure of proteinase K from low-dose merged lamellae that were not pre-coated with platinum 2.16A resolution (LD)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (2.16 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PS1
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XFEL beta2 AR structure by ligand exchange from Alprenolol to Timolol.
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(tert-butylamino)-3-[(4-morpholin-4-yl-1,2,5-thiadiazol-3-yl)oxy]propan-2-ol, CHOLESTEROL, ...
Authors:Ishchenko, A, Stauch, B, Han, G.W, Batyuk, A, Shiriaeva, A, Li, C, Zatsepin, N.A, Weierstall, U, Liu, W, Nango, E, Nakane, T, Tanaka, R, Tono, K, Joti, Y, Iwata, S, Moraes, I, Gati, C, Cherezov, C.
Deposit date:2019-07-12
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
Iucrj, 6, 2019
1E5N
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E246C mutant of P fluorescens subsp. cellulosa xylanase A in complex with xylopentaose
Descriptor: CALCIUM ION, ENDO-1,4-BETA-XYLANASE A, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Lo Leggio, L, Jenkins, J.A, Harris, G.W, Pickersgill, R.W.
Deposit date:2000-07-27
Release date:2000-12-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:X-ray crystallographic study of xylopentaose binding to Pseudomonas fluorescens xylanase A.
Proteins, 41, 2000
6P7Z
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Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
Descriptor: 5-cyclopropyl-N-[1-(methylsulfonyl)piperidin-4-yl]-1,2-oxazole-3-carboxamide, Histone-lysine N-methyltransferase SMYD3, MAGNESIUM ION, ...
Authors:Elkins, P.A, Bonnette, W.G.
Deposit date:2019-06-06
Release date:2020-01-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Discovery of Isoxazole Amides as Potent and Selective SMYD3 Inhibitors.
Acs Med.Chem.Lett., 11, 2020
5WKK
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1.55 A resolution structure of MERS 3CL protease in complex with inhibitor GC813
Descriptor: (1R,2S)-2-[(N-{[2-(3-chlorophenyl)ethoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-[(N-{[2-(3-chlorophenyl)ethoxy]carbonyl}-L-leucyl)amino]-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, MAGNESIUM ION, ...
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Rathnayake, A.D, Chang, K.O, Groutas, W.C.
Deposit date:2017-07-25
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-guided design of potent and permeable inhibitors of MERS coronavirus 3CL protease that utilize a piperidine moiety as a novel design element.
Eur J Med Chem, 150, 2018
5WKM
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2.25 A resolution structure of MERS 3CL protease in complex with piperidine-based peptidomimetic inhibitor 21
Descriptor: (1R,2S)-2-{[N-({[1-(tert-butoxycarbonyl)-4-ethylpiperidin-4-yl]oxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, (1S,2S)-2-{[N-({[1-(tert-butoxycarbonyl)-4-ethylpiperidin-4-yl]oxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, Orf1a protein
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Kankanamalage, A.C.G, Kim, Y, Rathnayake, A.D, Chang, K.O, Groutas, W.C.
Deposit date:2017-07-25
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-guided design of potent and permeable inhibitors of MERS coronavirus 3CL protease that utilize a piperidine moiety as a novel design element.
Eur J Med Chem, 150, 2018
5WZ1
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Crystal structure of Zika virus NS5 methyltransferase bound to S-adenosyl-L-methionine
Descriptor: NS5 methyltransferase, S-ADENOSYLMETHIONINE
Authors:Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
Deposit date:2017-01-16
Release date:2017-03-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.507 Å)
Cite:The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
5YVW
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Crystal structure of full length NS3 protein (eD4NS2BNS3) from DENV4 in closed conformation
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Genome polyprotein
Authors:PHOO, W.W, El Sahili, A.
Deposit date:2017-11-27
Release date:2018-12-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of unlinked full length NS3 from Dengue virus provide insights into dynamics of protease domain
To Be Published
3VJD
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BU of 3vjd by Molmil
Crystal structure of the Y248A mutant of C(30) carotenoid dehydrosqualene synthase from Staphylococcus aureus
Descriptor: Dehydrosqualene synthase, L(+)-TARTARIC ACID
Authors:Liu, C.I, Jeng, W.Y, Chang, W.J, Wang, A.H.J.
Deposit date:2011-10-14
Release date:2012-04-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Binding modes of zaragozic acid A to human squalene synthase and staphylococcal dehydrosqualene synthase
J.Biol.Chem., 287, 2012
5WBE
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BU of 5wbe by Molmil
COX-1:MOFEZOLAC COMPLEX STRUCTURE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Mofezolac, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Cingolani, G, Panella, A, Perrone, M.G, Vitale, P, Smith, W.L, Scilimati, A.
Deposit date:2017-06-28
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for selective inhibition of Cyclooxygenase-1 (COX-1) by diarylisoxazoles mofezolac and 3-(5-chlorofuran-2-yl)-5-methyl-4-phenylisoxazole (P6).
Eur J Med Chem, 138, 2017
6PS0
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BU of 6ps0 by Molmil
XFEL beta2 AR structure by ligand exchange from Alprenolol to Carazolol.
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol, CHOLESTEROL, ...
Authors:Ishchenko, A, Stauch, B, Han, G.W, Batyuk, A, Shiriaeva, A, Li, C, Zatsepin, N.A, Weierstall, U, Liu, W, Nango, E, Nakane, T, Tanaka, R, Tono, K, Joti, Y, Iwata, S, Moraes, I, Gati, C, Cherezov, C.
Deposit date:2019-07-12
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Toward G protein-coupled receptor structure-based drug design using X-ray lasers.
Iucrj, 6, 2019
2YJ9
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CATHEPSIN L WITH A NITRILE INHIBITOR
Descriptor: (2S,4R)-4-(2-chlorophenyl)sulfonyl-N-[1-(iminomethyl)cyclopropyl]-1-[1-[4-(trifluoromethyl)phenyl]cyclopropyl]carbonyl-pyrrolidine-2-carboxamide, CATHEPSIN L1, GLYCEROL
Authors:Banner, D.W, Benz, J.M, Haap, W.
Deposit date:2011-05-19
Release date:2011-11-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Halogen Bonding at the Active Sites of Human Cathepsin L and Mek1 Kinase: Efficient Interactions in Different Environments.
Chemmedchem, 6, 2011
3HRS
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Crystal Structure of the Manganese-activated Repressor ScaR: apo form
Descriptor: Metalloregulator ScaR, SULFATE ION
Authors:Stoll, K.E, Draper, W.E, Kliegman, J.I, Golynskiy, M.V, Brew-Appiah, R.A.T, Brown, H.K, Breyer, W.A, Jakubovics, N.S, Jenkinson, H.F, Brennan, R.B, Cohen, S.M, Glasfeld, A.
Deposit date:2009-06-09
Release date:2009-06-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterization and structure of the manganese-responsive transcriptional regulator ScaR.
Biochemistry, 48, 2009
5WT9
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Complex structure of PD-1 and nivolumab-Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
Authors:Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
Deposit date:2016-12-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
6PHR
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BU of 6phr by Molmil
Crystal structure of Marinobacter subterrani acetylpolyamine amidohydrolase (msAPAH) complexed with 5-[(3-aminopropyl)amino]pentane-1-thiol
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[(3-aminopropyl)amino]pentane-1-thiol, Acetylpolyamine amidohydrolase, ...
Authors:Osko, J.D, Christianson, D.W.
Deposit date:2019-06-25
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and Function of the Acetylpolyamine Amidohydrolase from the Deep Earth HalophileMarinobacter subterrani.
Biochemistry, 58, 2019
5WT7
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FAS1-IV domain of Human Periostin
Descriptor: Periostin
Authors:Yun, H, Lee, C.W.
Deposit date:2016-12-09
Release date:2017-12-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1H,13C, and 15N resonance assignments of FAS1-IV domain of human periostin, a component of extracellular matrix proteins.
Biomol NMR Assign, 12, 2018
3HRU
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BU of 3hru by Molmil
Crystal Structure of ScaR with bound Zn2+
Descriptor: Metalloregulator ScaR, SULFATE ION, ZINC ION
Authors:Stoll, K.E, Draper, W.E, Kliegman, J.I, Golynskiy, M.V, Brew-Appiah, R.A.T, Brown, H.K, Breyer, W.A, Jakubovics, N.S, Jenkinson, H.F, Brennan, R.B, Cohen, S.M, Glasfeld, A.
Deposit date:2009-06-09
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Characterization and structure of the manganese-responsive transcriptional regulator ScaR.
Biochemistry, 48, 2009
2YK5
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Structure of Neisseria LOS-specific sialyltransferase (NST), in complex with CMP.
Descriptor: 1,2-ETHANEDIOL, CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE-ALPHA-2,3-SIALYLTRANSFERASE, CYTIDINE-5'-MONOPHOSPHATE, ...
Authors:Lin, L.Y.C, Rakic, B, Chiu, C.P.C, Lameignere, E, Wakarchuk, W.W, Withers, S.G, Strynadka, N.C.J.
Deposit date:2011-05-25
Release date:2011-08-31
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structure and Mechanism of the Lipooligosaccharide Sialyltransferase from Neisseria Meningitidis
J.Biol.Chem., 286, 2011
5WDH
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BU of 5wdh by Molmil
Motor domain of human kinesin family member C1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIFC1, MAGNESIUM ION, ...
Authors:Zhu, H, Tempel, W, He, H, Shen, Y, Wang, J, Brothers, G, Landry, R, Arrowsmith, C.H, Edwards, A.M, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2017-07-05
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Structural basis of small molecule ATPase inhibition of a human mitotic kinesin motor protein.
Sci Rep, 7, 2017
2J6Z
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Structural and functional characterisation of partner-switching regulating the environmental stress response in B. subtilis
Descriptor: PHOSPHOSERINE PHOSPHATASE RSBU
Authors:Hardwick, S.W, Pane-Farre, J, Delumeau, O, Marles-Wright, J, Murray, J.W, Hecker, M, Lewis, R.J.
Deposit date:2006-10-05
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and functional characterization of partner switching regulating the environmental stress response in Bacillus subtilis.
J. Biol. Chem., 282, 2007
1WVF
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BU of 1wvf by Molmil
p-Cresol Methylhydroxylase: Alteration of the Structure of the Flavoprotein Subunit upon its Binding to the Cytochrome Subunit
Descriptor: 4-cresol dehydrogenase [hydroxylating] flavoprotein subunit, ACETIC ACID, CHLORIDE ION, ...
Authors:Cunane, L.M, Chen, Z.-W, McIntire, W.S, Mathews, F.S.
Deposit date:2004-12-15
Release date:2005-03-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:p-Cresol Methylhydroxylase: Alteration of the Structure of the Flavoprotein Subunit upon Its Binding to the Cytochrome Subunit
Biochemistry, 44, 2005
2Y75
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The Structure of CymR (YrzC) the Global Cysteine Regulator of B. subtilis
Descriptor: CHLORIDE ION, HTH-TYPE TRANSCRIPTIONAL REGULATOR CYMR, SULFATE ION
Authors:Shepard, W, Soutourina, O, Courtois, E, England, P, Haouz, A, Martin-Verstraete, I.
Deposit date:2011-01-28
Release date:2011-08-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights Into the Rrf2 Repressor Family - the Structure of Cymr, the Global Cysteine Regulator of Bacillus Subtilis.
FEBS J., 278, 2011
6PKL
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BU of 6pkl by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.59A resolution (#7)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (2.59 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKT
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MicroED structure of proteinase K from merging low-dose, platinum pre-coated lamellae at 1.85A resolution (LDPT)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (1.85 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
2J5C
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Rational conversion of substrate and product specificity in a monoterpene synthase. Structural insights into the molecular basis of rapid evolution.
Descriptor: 1,8-CINEOLE SYNTHASE, BETA-MERCAPTOETHANOL
Authors:Kampranis, S.C, Ioannidis, D, Purvis, A, Mahrez, W, Ninga, E, Katerelos, N.A, Anssour, S, Dunwell, J.M, Makris, A.M, Goodenough, P.W, Johnson, C.B.
Deposit date:2006-09-14
Release date:2007-06-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Rational Conversion of Substrate and Product Specificity in a Salvia Monoterpene Synthase: Structural Insights Into the Evolution of Terpene Synthase Function.
Plant Cell, 19, 2007

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