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PDB: 57 件
7CAR
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BU of 7car by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: free+IPP)
分子名称: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, PALMITIC ACID, PHOSPHATE ION, ...
著者Unno, H, Hemmi, H.
登録日2020-06-10
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
7CAQ
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BU of 7caq by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: substrate-free)
分子名称: PALMITIC ACID, PHOSPHATE ION, cis-prenyltransferase MM_0014
著者Unno, H, Hemmi, H.
登録日2020-06-10
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
7CAS
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BU of 7cas by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: free+PPi)
分子名称: DIPHOSPHATE, MAGNESIUM ION, PALMITIC ACID, ...
著者Unno, H, Hemmi, H.
登録日2020-06-10
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
7CAV
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Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG+DMAPP)
分子名称: 2-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,3-diol, DIMETHYLALLYL DIPHOSPHATE, DIPHOSPHATE, ...
著者Unno, H, Hemmi, H.
登録日2020-06-10
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
7CC3
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BU of 7cc3 by Molmil
Versatile cis-prenyltransferase MM_0014 from Methanosarcina mazei (crystal type: co-FG)
分子名称: (2R)-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,2-diol, (2S)-3-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,2-diol, 2-[(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trienoxy]propane-1,3-diol, ...
著者Unno, H, Hemmi, H.
登録日2020-06-16
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献A versatile cis-prenyltransferase from Methanosarcina mazei catalyzes both C- and O-prenylations.
J.Biol.Chem., 296, 2021
3B06
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Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and DMAPP.
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, DIMETHYLALLYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
著者Unno, H, Nagai, T, Hemmi, H.
登録日2011-06-03
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Covalent modification of reduced flavin mononucleotide in type-2 isopentenyl diphosphate isomerase by active-site-directed inhibitors.
Proc.Natl.Acad.Sci.USA, 108, 2011
3B04
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Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with oIPP.
分子名称: 1-deoxy-1-[(4aR)-4a-[(2R)-1-hydroxy-5-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}-3-methylidenepentan-2-yl]-7,8-dimethyl-2,4-dioxo-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-5-O-phosphono-D-ribitol, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION
著者Unno, H, Nagai, T, Hemmi, H.
登録日2011-06-03
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Covalent modification of reduced flavin mononucleotide in type-2 isopentenyl diphosphate isomerase by active-site-directed inhibitors.
Proc.Natl.Acad.Sci.USA, 108, 2011
3B05
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BU of 3b05 by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and IPP at 2.2A resolution.
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
著者Unno, H, Nagai, T, Hemmi, H.
登録日2011-06-03
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Covalent modification of reduced flavin mononucleotide in type-2 isopentenyl diphosphate isomerase by active-site-directed inhibitors.
Proc.Natl.Acad.Sci.USA, 108, 2011
3B03
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Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with vIPP.
分子名称: 1-deoxy-1-[(4aR)-4a-[(2Z)-2-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)but-2-en-1-yl]-7,8-dimethyl-2,4-dioxo-3,4,4a,5-tetrahydrobenzo[g]pteridin-10(2H)-yl]-5-O-phosphono-D-ribitol, Isopentenyl-diphosphate delta-isomerase, MAGNESIUM ION
著者Unno, H, Nagai, T, Hemmi, H.
登録日2011-06-03
公開日2011-11-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Covalent modification of reduced flavin mononucleotide in type-2 isopentenyl diphosphate isomerase by active-site-directed inhibitors.
Proc.Natl.Acad.Sci.USA, 108, 2011
6A7S
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BU of 6a7s by Molmil
Ca2+-independent C-type lectin SPL-2 from Saxidomus purpuratus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, CALCIUM ION, ...
著者Unno, H, Hatakeyama, T.
登録日2018-07-04
公開日2019-03-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel Ca2+-independent carbohydrate recognition of the C-type lectins, SPL-1 and SPL-2, from the bivalve Saxidomus purpuratus.
Protein Sci., 28, 2019
6A7T
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BU of 6a7t by Molmil
Ca2+-independent C-type lectin SPL-1 from Saxidomus purpuratus
分子名称: CALCIUM ION, N-acetylglucosamine-specific lectin
著者Unno, H, Hatakeyama, T.
登録日2018-07-04
公開日2019-03-20
最終更新日2019-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Novel Ca2+-independent carbohydrate recognition of the C-type lectins, SPL-1 and SPL-2, from the bivalve Saxidomus purpuratus.
Protein Sci., 28, 2019
3W9T
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BU of 3w9t by Molmil
pore-forming CEL-III
分子名称: CALCIUM ION, Hemolytic lectin CEL-III, MAGNESIUM ION, ...
著者Unno, H, Goda, S, Hatakeyama, T.
登録日2013-04-16
公開日2014-03-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Hemolytic lectin CEL-III heptamer reveals its transmembrane pore-formation mechanism
J.Biol.Chem., 2014
7COV
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BU of 7cov by Molmil
Potato D-enzyme, native (substrate free)
分子名称: 4-alpha-glucanotransferase, chloroplastic/amyloplastic, CALCIUM ION, ...
著者Unno, H, Imamura, K.
登録日2020-08-05
公開日2020-08-26
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural analysis and reaction mechanism of the disproportionating enzyme (D-enzyme) from potato.
Protein Sci., 29, 2020
2ZRV
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BU of 2zrv by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN.
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, Isopentenyl-diphosphate delta-isomerase
著者Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
登録日2008-09-01
公開日2009-01-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRY
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Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and IPP.
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
著者Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
登録日2008-09-01
公開日2009-01-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRW
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BU of 2zrw by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN and IPP.
分子名称: FLAVIN MONONUCLEOTIDE, ISOPENTYL PYROPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
著者Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
登録日2008-09-01
公開日2009-01-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRZ
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Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and DMAPP
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, DIMETHYLALLYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
著者Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
登録日2008-09-01
公開日2009-01-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRU
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BU of 2zru by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN
分子名称: FLAVIN MONONUCLEOTIDE, Isopentenyl-diphosphate delta-isomerase
著者Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
登録日2008-09-01
公開日2009-01-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRX
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BU of 2zrx by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN and DMAPP.
分子名称: DIMETHYLALLYL DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Isopentenyl-diphosphate delta-isomerase, ...
著者Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
登録日2008-09-01
公開日2009-01-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZOF
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BU of 2zof by Molmil
Crystal structure of mouse carnosinase CN2 complexed with MN and bestatin
分子名称: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Cytosolic non-specific dipeptidase, MANGANESE (II) ION
著者Unno, H, Yamashita, T, Okumura, N, Kusunoki, M.
登録日2008-05-14
公開日2008-06-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for substrate recognition and hydrolysis by mouse carnosinase CN2.
J.Biol.Chem., 283, 2008
2ZOG
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Crystal structure of mouse carnosinase CN2 complexed with ZN and bestatin
分子名称: 2-(3-AMINO-2-HYDROXY-4-PHENYL-BUTYRYLAMINO)-4-METHYL-PENTANOIC ACID, Cytosolic non-specific dipeptidase, ZINC ION
著者Unno, H, Yamashita, T, Okumura, N, Kusunoki, M.
登録日2008-05-14
公開日2008-06-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for substrate recognition and hydrolysis by mouse carnosinase CN2.
J.Biol.Chem., 283, 2008
4Z7Y
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BU of 4z7y by Molmil
diphosphomevalonate decarboxylase from the Sulfolobus solfataricus, space group P21
分子名称: Diphosphomevalonate decarboxylase, SULFATE ION
著者Hattori, A, Unno, H, Hemmi, H.
登録日2015-04-08
公開日2015-09-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献In Vivo Formation of the Protein Disulfide Bond That Enhances the Thermostability of Diphosphomevalonate Decarboxylase, an Intracellular Enzyme from the Hyperthermophilic Archaeon Sulfolobus solfataricus
J.Bacteriol., 197, 2015
3VKJ
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BU of 3vkj by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase, octameric form
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, Isopentenyl-diphosphate delta-isomerase
著者Nakatani, H, Goda, S, Unno, H, Nagai, T, Yoshimura, T, Hemmi, H.
登録日2011-11-17
公開日2012-05-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Substrate-Induced Change in the Quaternary Structure of Type 2 Isopentenyl Diphosphate Isomerase from Sulfolobus shibatae.
J.Bacteriol., 194, 2012
3WJ2
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Crystal structure of ESTFA (FE-lacking apo form)
分子名称: Carboxylesterase
著者Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
登録日2013-10-03
公開日2014-07-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014
3WJ1
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Crystal structure of SSHESTI
分子名称: Carboxylesterase, octyl beta-D-glucopyranoside
著者Ohara, K, Unno, H, Oshima, Y, Furukawa, K, Fujino, N, Hirooka, K, Hemmi, H, Takahashi, S, Nishino, T, Kusunoki, M, Nakayama, T.
登録日2013-10-03
公開日2014-07-30
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural insights into the low pH adaptation of a unique carboxylesterase from Ferroplasma: altering the pH optima of two carboxylesterases.
J.Biol.Chem., 289, 2014

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