Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1177 件

7SW7
DownloadVisualize
BU of 7sw7 by Molmil
MicroED structure of proteinase K from a 530 nm thick lamella measured at 200 kV
分子名称: Proteinase K
著者Martynowycz, M.W, Clabbers, M.T.B, Unge, J, Hattne, J, Gonen, T.
登録日2021-11-19
公開日2022-09-07
最終更新日2023-10-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.3 Å)
主引用文献Benchmarking the ideal sample thickness in cryo-EM.
Proc.Natl.Acad.Sci.USA, 118, 2021
7SWA
DownloadVisualize
BU of 7swa by Molmil
MicroED structure of proteinase K from a 320 nm thick lamella measured at 300 kV
分子名称: Proteinase K
著者Martynowycz, M.W, Clabbers, M.T.B, Unge, J, Hattne, J, Gonen, T.
登録日2021-11-19
公開日2022-09-07
最終更新日2023-10-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.1 Å)
主引用文献Benchmarking the ideal sample thickness in cryo-EM.
Proc.Natl.Acad.Sci.USA, 118, 2021
7ULY
DownloadVisualize
BU of 7uly by Molmil
MicroED structure of triclinic lysozyme
分子名称: Lysozyme C, NITRATE ION
著者Clabbers, M.T.B, Martynowycz, M.W, Hattne, J, Gonen, T.
登録日2022-04-05
公開日2023-03-15
実験手法ELECTRON CRYSTALLOGRAPHY (0.87 Å)
主引用文献Hydrogens and hydrogen-bond networks in macromolecular MicroED data.
J Struct Biol X, 6, 2022
6HSF
DownloadVisualize
BU of 6hsf by Molmil
Crystal structure of Schistosoma mansoni HDAC8 mutant H292M complexed with PCI-34051
分子名称: 1-[(4-methoxyphenyl)methyl]-~{N}-oxidanyl-indole-6-carboxamide, DIMETHYLFORMAMIDE, GLYCEROL, ...
著者Shaik, T.B, Marek, M, Romier, C.
登録日2018-10-01
公開日2018-10-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Characterization of Histone Deacetylase 8 (HDAC8) Selective Inhibition Reveals Specific Active Site Structural and Functional Determinants.
J. Med. Chem., 61, 2018
6HTH
DownloadVisualize
BU of 6hth by Molmil
Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 5
分子名称: 4-methoxy-~{N}-oxidanyl-3-[(4-phenylphenyl)carbonylamino]benzamide, DIMETHYLFORMAMIDE, GLYCEROL, ...
著者Shaik, T.B, Marek, M, Romier, C.
登録日2018-10-04
公開日2018-10-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Characterization of Histone Deacetylase 8 (HDAC8) Selective Inhibition Reveals Specific Active Site Structural and Functional Determinants.
J. Med. Chem., 61, 2018
6HX3
DownloadVisualize
BU of 6hx3 by Molmil
PDX1.2/PDX1.3 complex
分子名称: Pyridoxal 5'-phosphate synthase subunit PDX1.3, Pyridoxal 5'-phosphate synthase-like subunit PDX1.2, SULFATE ION
著者Robinson, G.C, Kaufmann, M, Roux, C, Martinez-Font, J, Hothorn, M, Thore, S, Fitzpatrick, T.B.
登録日2018-10-15
公開日2019-04-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the pseudoenzyme PDX1.2 in complex with its cognate enzyme PDX1.3: a total eclipse.
Acta Crystallogr D Struct Biol, 75, 2019
1AH1
DownloadVisualize
BU of 1ah1 by Molmil
CTLA-4, NMR, 20 STRUCTURES
分子名称: CTLA-4, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Metzler, W.J, Bajorath, J, Fenderson, W, Shaw, S.-Y, Peach, R, Constantine, K.L, Naemura, J, Leytze, G, Lavoie, T.B, Mueller, L, Linsley, P.S.
登録日1997-04-11
公開日1998-04-15
最終更新日2020-07-29
実験手法SOLUTION NMR
主引用文献Solution structure of human CTLA-4 and delineation of a CD80/CD86 binding site conserved in CD28.
Nat.Struct.Biol., 4, 1997
3TC6
DownloadVisualize
BU of 3tc6 by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR63.
分子名称: DI(HYDROXYETHYL)ETHER, Indole-3-glycerol phosphate synthase, PHOSPHATE ION
著者Vorobiev, S, Su, M, Bjelic, S, Kipnis, Y, Wang, L, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-08-08
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Exploration of alternate catalytic mechanisms and optimization strategies for retroaldolase design.
J.Mol.Biol., 426, 2014
3TC7
DownloadVisualize
BU of 3tc7 by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR62.
分子名称: ACETIC ACID, Indole-3-glycerol phosphate synthase, PHOSPHATE ION
著者Vorobiev, S, Su, M, Bjelic, S, Kipnis, Y, Wang, L, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Baker, D, Everett, J.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-08-08
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Exploration of alternate catalytic mechanisms and optimization strategies for retroaldolase design.
J.Mol.Biol., 426, 2014
3U26
DownloadVisualize
BU of 3u26 by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR48
分子名称: PF00702 domain protein
著者Seetharaman, J, Lew, S, Nivon, L, Baker, D, Bjelic, S, Ciccosanti, C, Sahdev, S, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2011-09-30
公開日2011-11-23
最終更新日2022-03-02
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Computational design of enone-binding proteins with catalytic activity for the Morita-Baylis-Hillman reaction.
Acs Chem.Biol., 8, 2013
3U13
DownloadVisualize
BU of 3u13 by Molmil
Crystal Structure of de Novo design of cystein esterase ECH13 at the resolution 1.6A, Northeast Structural Genomics Consortium Target OR51
分子名称: DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, PHOSPHATE ION, ...
著者Kuzin, A, Su, M, Seetharaman, J, Sahdev, S, Xiao, R, Kohan, E, Richter, F, Everett, J.K, Acton, T.B, Baker, D, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-09-29
公開日2011-11-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Computational design of catalytic dyads and oxyanion holes for ester hydrolysis.
J.Am.Chem.Soc., 134, 2012
3SXW
DownloadVisualize
BU of 3sxw by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.
分子名称: Glucose-6-phosphate isomerase
著者Vorobiev, S, Su, M, Nivon, L, Seetharaman, J, Patel, P, Xiao, R, Maglaqui, M, Ciccosanti, C, Baker, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-07-15
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR69.
To be Published
3SLJ
DownloadVisualize
BU of 3slj by Molmil
Pre-cleavage Structure of the Autotransporter EspP - N1023A mutant
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Serine protease espP
著者Barnard, T.B, Noinaj, N, Easley, N.C, Kuszak, A.J, Buchanan, S.K.
登録日2011-06-24
公開日2011-11-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.481 Å)
主引用文献Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.
J.Mol.Biol., 415, 2012
3SWV
DownloadVisualize
BU of 3swv by Molmil
Crystal Structure of a domain of Brefeldin A-inhibited guanine nucleotide-exchange protein 2 (Brefeldin A-inhibited GEP 2) from Homo sapiens (Human), Northeast Structural Genomics Consortium target id HR5562A
分子名称: Brefeldin A-inhibited guanine nucleotide-exchange protein 2
著者Seetharaman, J, Su, M, Forouhar, F, Wang, D, Janjua, H, Cunningham, K, Owens, L, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-07-14
公開日2011-08-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal Structure of a domain of Brefeldin A-inhibited guanine nucleotide-exchange protein 2 (BrefeldinA-inhibited GEP 2) from Homo sapiens (Human), Northeast Structural Genomics Consortium target id HR5562A
To be Published
3SY1
DownloadVisualize
BU of 3sy1 by Molmil
Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR70
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETIC ACID, UPF0001 protein yggS
著者Vorobiev, S, Su, M, Nivon, L, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Maglaqui, M, Baker, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2011-07-15
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.465 Å)
主引用文献Crystal Structure of Engineered Protein. Northeast Structural Genomics Consortium Target OR70
To be Published
3SLT
DownloadVisualize
BU of 3slt by Molmil
Pre-cleavage Structure of the Autotransporter EspP - N1023S Mutant
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Serine protease espP
著者Barnard, T.B, Noinaj, N, Easley, N.C, Kuszak, A.J, Buchanan, S.K.
登録日2011-06-25
公開日2011-11-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.
J.Mol.Biol., 415, 2012
3SEK
DownloadVisualize
BU of 3sek by Molmil
Crystal Structure of the Myostatin:Follistatin-like 3 Complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Follistatin-related protein 3, Growth/differentiation factor 8
著者Cash, J.N, Thompson, T.B.
登録日2011-06-10
公開日2011-11-02
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structure of myostatinfollistatin-like 3: N-terminal domains of follistatin-type molecules exhibit alternate modes of binding.
J.Biol.Chem., 287, 2012
3S84
DownloadVisualize
BU of 3s84 by Molmil
Dimeric apoA-IV
分子名称: Apolipoprotein A-IV, SULFATE ION
著者Deng, X, Davidson, W.S, Thompson, T.B.
登録日2011-05-27
公開日2012-05-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Structure of Dimeric Apolipoprotein A-IV and Its Mechanism of Self-Association.
Structure, 20, 2012
1XKL
DownloadVisualize
BU of 1xkl by Molmil
Crystal Structure of Salicylic Acid-binding Protein 2 (SABP2) from Nicotiana tabacum, NESG Target AR2241
分子名称: 2-AMINO-4H-1,3-BENZOXATHIIN-4-OL, salicylic acid-binding protein 2
著者Forouhar, F, Chen, Y, Chiang, Y, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2004-09-29
公開日2004-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and biochemical studies identify tobacco SABP2 as a methyl salicylate esterase and implicate it in plant innate immunity
Proc.Natl.Acad.Sci.USA, 102, 2005
1XHS
DownloadVisualize
BU of 1xhs by Molmil
Solution NMR Structure of Protein ytfP from Escherichia coli. Northeast Structural Genomics Consortium Target ER111.
分子名称: Hypothetical UPF0131 protein ytfP
著者Aramini, J.M, Huang, Y.J, Swapna, G.V.T, Paranji, R.K, Xiao, R, Shastry, R, Acton, T.B, Cort, J.R, Kennedy, M.A, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2004-09-20
公開日2005-01-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution NMR structure of Escherichia coli ytfP expands the structural coverage of the UPF0131 protein domain family.
Proteins, 68, 2007
3V45
DownloadVisualize
BU of 3v45 by Molmil
Crystal Structure of de novo designed serine hydrolase OSH55, Northeast Structural Genomics Consortium Target OR130
分子名称: CHLORIDE ION, SODIUM ION, Serine hydrolase OSH55
著者Kuzin, A, Su, M, Seetharaman, J, Maglaqui, M, Xiao, R, Kohan, E, Rajagopalan, S, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Baker, D, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2011-12-14
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Design of activated serine-containing catalytic triads with atomic-level accuracy.
Nat.Chem.Biol., 10, 2014
3SYX
DownloadVisualize
BU of 3syx by Molmil
Crystal Structure of the WH1 domain from human sprouty-related, EVH1 domain-containing protein. Northeast Structural Genomics Consortium Target HR5538B.
分子名称: Sprouty-related, EVH1 domain-containing protein 1, YTTRIUM (III) ION
著者Vorobiev, S, Su, M, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2011-07-18
公開日2011-08-03
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.453 Å)
主引用文献Crystal Structure of the WH1 domain from human sprouty-related, EVH1 domain-containing protein.
To be Published
1W2K
DownloadVisualize
BU of 1w2k by Molmil
tf7a_4380 complex
分子名称: (2R)-2-({4-[AMINO(IMINO)METHYL]PHENYL}AMINO)-N-BENZYL-2-(3,4-DIMETHOXYPHENYL)ACETAMIDE, BLOOD COAGULATION FACTOR VIIA, CACODYLATE ION, ...
著者Banner, D.W, D'Arcy, A, Groebke-Zbinden, K, Ackermann, J, Kirchhofer, D, Ji, Y.-H, Tschopp, T.B, Wallbaum, S, Weber, L.
登録日2004-07-06
公開日2005-06-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Design of Selective Phenylglycine Amide Tissue Factor/Factor Viia Inhibitors
Bioorg.Med.Chem.Lett., 15, 2005
3SLO
DownloadVisualize
BU of 3slo by Molmil
Pre-cleavage Structure of the Autotransporter EspP - N1023D mutant
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Serine protease espP
著者Barnard, T.B, Noinaj, N, Easley, N.C, Kuszak, A.J, Buchanan, S.K.
登録日2011-06-24
公開日2011-11-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.
J.Mol.Biol., 415, 2012
3SH3
DownloadVisualize
BU of 3sh3 by Molmil
Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii STANDL
分子名称: 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, CHLORIDE ION, ...
著者Rangel, T.B.A, Rocha, B.A.M, Bezerra, G.A, Bezerra, M.J.B, Nascimento, K.S, Nagano, C.S, Sampaio, A.H, Assreuy, A.M.S, Gruber, K, Delatorre, P, Cavada, B.S.
登録日2011-06-15
公開日2011-10-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii Standl.
Biochimie, 94, 2012

224201

件を2024-08-28に公開中

PDB statisticsPDBj update infoContact PDBjnumon