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PDB: 1946 件

7FFC
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Diarylpentanoid-producing polyketide synthase (A210E mutant)
分子名称: GLYCEROL, Type III polyketide synthase
著者Morita, H, Wong, C.P, Liu, Q, Kodama, T, Lee, Y, Nakashima, Y.
登録日2021-07-23
公開日2022-01-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
5X9A
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BU of 5x9a by Molmil
Crystal structure of calaxin with calcium
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Calaxin
著者Shojima, T, Hou, F, Takahashi, Y, Okai, M, Mizuno, K, Inaba, K, Miyakawa, T, Tanokura, M.
登録日2017-03-06
公開日2018-03-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of a Ca2+-dependent regulator of flagellar motility reveals the open-closed structural transition
Sci Rep, 8, 2018
5XV8
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BU of 5xv8 by Molmil
Solution structure of the complex between UVSSA acidic region and TFIIH p62 PH domain
分子名称: General transcription factor IIH subunit 1, UV-stimulated scaffold protein A
著者Okuda, M, Nishimura, Y.
登録日2017-06-27
公開日2017-11-08
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Common TFIIH recruitment mechanism in global genome and transcription-coupled repair subpathways
Nucleic Acids Res., 45, 2017
5YPX
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BU of 5ypx by Molmil
Crystal structure of calaxin with magnesium
分子名称: Calaxin, MAGNESIUM ION
著者Shojima, T, Hou, F, Takahashi, Y, Okai, M, Mizuno, K, Inaba, K, Miyakawa, T, Tanokura, M.
登録日2017-11-04
公開日2018-03-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Crystal structure of a Ca2+-dependent regulator of flagellar motility reveals the open-closed structural transition
Sci Rep, 8, 2018
2LX2
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BU of 2lx2 by Molmil
1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout
分子名称: Type III antifreeze protein nfeAFP11
著者Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S.
登録日2012-08-12
公開日2013-07-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
2Q33
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Crystal structure of all-D monellin at 1.8 A resolution
分子名称: D-MONELLIN CHAIN A, D-MONELLIN CHAIN B
著者Hung, L.-W, Kohmura, M, Ariyoshi, Y, Kim, S.-H.
登録日2007-05-29
公開日2007-11-13
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of an Enantiomeric Protein, D-Monellin at 1.8 A Resolution.
Acta Crystallogr.,Sect.D, 54, 1998
1WTH
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BU of 1wth by Molmil
Crystal structure of gp5-S351L mutant and gp27 complex
分子名称: Baseplate structural protein Gp27, PHOSPHATE ION, POTASSIUM ION, ...
著者Kanamaru, S, Ishiwata, Y, Suzuki, T, Rossmann, M.G, Arisaka, F.
登録日2004-11-23
公開日2005-03-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Control of bacteriophage t4 tail lysozyme activity during the infection process
J.Mol.Biol., 346, 2005
7BUL
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BU of 7bul by Molmil
Solution structure of the tandem PH and BSD1 domains of TFIIH p62
分子名称: General transcription factor IIH subunit 1
著者Okuda, M, Nishimura, Y.
登録日2020-04-07
公開日2020-12-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and dynamical insights into the PH domain of p62 in human TFIIH.
Nucleic Acids Res., 49, 2021
7C6A
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Crystal structure of AT2R-BRIL and SRP2070_Fab complex
分子名称: IgG Light Chain, IgG heavy chain, SAR1, ...
著者Suzuki, M, Miyagi, H, Asada, H, Yasunaga, M, Suno, C, Takahashi, Y, Saito, J, Iwata, S.
登録日2020-05-21
公開日2020-07-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献The discovery of a new antibody for BRIL-fused GPCR structure determination.
Sci Rep, 10, 2020
7C61
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Crystal structure of 5-HT1B-BRIL and SRP2070_Fab complex
分子名称: 5-hydroxytryptamine receptor 1B,Soluble cytochrome b562,5-hydroxytryptamine receptor 1B, Ergotamine, IGG HEAVY CHAIN, ...
著者Suzuki, M, Miyagi, H, Asada, H, Yasunaga, M, Suno, C, Takahashi, Y, Saito, J, Iwata, S.
登録日2020-05-21
公開日2020-07-29
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The discovery of a new antibody for BRIL-fused GPCR structure determination.
Sci Rep, 10, 2020
1V6R
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BU of 1v6r by Molmil
Solution Structure of Endothelin-1 with its C-terminal Folding
分子名称: Endothelin-1
著者Takashima, H, Mimura, N, Ohkubo, T, Yoshida, T, Tamaoki, H, Kobayashi, Y.
登録日2003-12-03
公開日2004-03-16
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Distributed Computing and NMR Constraint-Based High-Resolution Structure Determination: Applied for Bioactive Peptide Endothelin-1 To Determine C-Terminal Folding
J.Am.Chem.Soc., 126, 2004
5YK9
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BU of 5yk9 by Molmil
Crystal structure of selenomethionine-labelled indole prenyltransferase AmbP1
分子名称: AmbP1
著者Awakawa, T, Nakashima, Y, Liu, X, Abe, I.
登録日2017-10-12
公開日2018-06-06
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
3B2C
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BU of 3b2c by Molmil
Crystal structure of the collagen triple helix model [{PRO-HYP(R)-GLY}4-{HYP(S)-Pro-GLY}2-{PRO-HYP(R)-GLY}4]3
分子名称: Collagen-like peptide
著者Motooka, D, Kawahara, K, Nakamura, S, Doi, M, Nishi, Y, Nishiuchi, Y, Nakazawa, T, Yoshida, T, Ohkubo, T, Kobayashi, Y, Kang, Y.K, Uchiyama, S.
登録日2011-07-26
公開日2012-04-04
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献The triple helical structure and stability of collagen model peptide with 4(S)-hydroxyprolyl-pro-gly units
Biopolymers, 98, 2011
7AKT
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BU of 7akt by Molmil
CrPetF variant - A39G_A41V
分子名称: BENZAMIDINE, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Kurisu, G, Ohnishi, Y, Engelbrecht, V, Happe, T.
登録日2020-10-02
公開日2021-10-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.11 Å)
主引用文献Ferredoxin 2.0: an electron transfer protein designed into a photosystem I-driven hydrogenase
To Be Published
7BL1
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BU of 7bl1 by Molmil
human complex II-BATS bound to membrane-attached Rab5a-GTP
分子名称: Beclin-1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Tremel, S, Morado, D.R, Kovtun, O, Williams, R.L, Briggs, J.A.G, Munro, S, Ohashi, Y, Bertram, J, Perisic, O.
登録日2021-01-17
公開日2021-03-03
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Structural basis for VPS34 kinase activation by Rab1 and Rab5 on membranes.
Nat Commun, 12, 2021
2LDR
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BU of 2ldr by Molmil
Solution structure of Helix-RING domain of Cbl-b in the Tyr363 phosphorylated form
分子名称: E3 ubiquitin-protein ligase CBL-B, ZINC ION
著者Kumeta, H, Kobashigawa, Y, Inagaki, F.
登録日2011-06-01
公開日2011-12-14
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Autoinhibition and phosphorylation-induced activation mechanisms of human cancer and autoimmune disease-related E3 protein Cbl-b
Proc.Natl.Acad.Sci.USA, 108, 2011
7E15
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BU of 7e15 by Molmil
Protein ternary complex working for DNA replication initiation
分子名称: DNA polymerase II small subunit, Gins51, SsDNA-specific exonuclease
著者Oyama, T, Ishino, Y.
登録日2021-01-30
公開日2021-10-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Family D DNA polymerase interacts with GINS to promote CMG-helicase in the archaeal replisome.
Nucleic Acids Res., 50, 2022
2HOW
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BU of 2how by Molmil
Dipeptidase (PH0974) from Pyrococcus horikoshii OT3
分子名称: 356aa long hypothetical dipeptidase
著者Jeyakanthan, J, Yokoyama, S, Shiro, Y, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-07-17
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dipeptidase (PH0974) from Pyrococcus Horikoshii Ot3
To be Published
2JPO
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BU of 2jpo by Molmil
NMR structure of Antheraea polyphemus pheromone-binding protein 1 at pH 4.5
分子名称: Pheromone-binding protein
著者Damberger, F.F, Wuthrich, K, Leal, W.S, Ishida, Y.
登録日2007-05-20
公開日2007-10-30
最終更新日2011-10-12
実験手法SOLUTION NMR
主引用文献Structural Basis of Ligand Binding and Release in Insect Pheromone-Binding Proteins: NMR Structure of Antheraea polyphemus PBP1 at pH 4.5
J.Mol.Biol., 373, 2007
7EAQ
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BU of 7eaq by Molmil
DNA quadruplex composed of i-motif and Z-DNA
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*CP*CP*TP*CP*GP*CP*G)-3')
著者Kondo, J, Igarashi, Y.
登録日2021-03-08
公開日2022-03-09
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献DNA quadruplex composed of i-motif and Z-DNA
To Be Published
1T7H
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BU of 1t7h by Molmil
X-ray structure of [Lys(-2)-Arg(-1)-des(17-21)]-endothelin-1 peptide
分子名称: Endothelin-1
著者Hoh, F, Cerdan, R, Kaas, Q, Nishi, Y, Chiche, L, Kubo, S, Chino, N, Kobayashi, Y, Dumas, C, Aumelas, A.
登録日2004-05-10
公開日2004-12-21
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献High-resolution X-ray structure of the unexpectedly stable dimer of the [Lys(-2)-Arg(-1)-des(17-21)]endothelin-1 peptide
Biochemistry, 43, 2004
2KE4
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BU of 2ke4 by Molmil
The NMR structure of the TC10 and Cdc42 interacting domain of CIP4
分子名称: Cdc42-interacting protein 4
著者Kumeta, H, Kanoh, D, Kobashigawa, Y, Inagaki, F.
登録日2009-01-22
公開日2009-03-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The NMR structure of the TC10- and Cdc42-interacting domain of CIP4.
J.Biomol.Nmr, 44, 2009
2KBT
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BU of 2kbt by Molmil
Attachment of an NMR-invisible solubility enhancement tag (INSET) using a sortase-mediated protein ligation method
分子名称: Proto-oncogene vav,Immunoglobulin G-binding protein G
著者Kumeta, H, Kobashigawa, Y, Ogura, K, Inagaki, F.
登録日2008-12-07
公開日2009-02-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Attachment of an NMR-invisible solubility enhancement tag using a sortase-mediated protein ligation method
J.Biomol.Nmr, 43, 2009
2LX3
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BU of 2lx3 by Molmil
1H,13C,15N assignments for an isoform of the type III antifreeze protein from notched-fin eelpout
分子名称: Type III antifreeze protein nfeAFP11
著者Kumeta, H, Ogura, K, Nishimiya, Y, Miura, A, Inagaki, F, Tsuda, S.
登録日2012-08-12
公開日2013-07-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure note: a defective isoform and its activity-improved variant of a type III antifreeze protein from Zoarces elongates Kner
J.Biomol.Nmr, 55, 2013
6IMY
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BU of 6imy by Molmil
Crystal structure of V30M mutated transthyretin in complex with 4'-caroboxybenzo-18-Crown-6
分子名称: 2,3,5,6,8,9,11,12,14,15-decahydro-1,4,7,10,13,16-benzohexaoxacyclooctadecine-18-carboxylic acid, Transthyretin
著者Yokoyama, T, Kosaka, Y, Matsumoto, K, Kitakami, R, Nabeshima, Y, Mizuguchi, M.
登録日2018-10-24
公開日2019-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.501 Å)
主引用文献Crown Ethers as Transthyretin Amyloidogenesis Inhibitors.
J. Med. Chem., 62, 2019

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件を2024-09-25に公開中

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