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PDB: 79 件

8GKV
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BU of 8gkv by Molmil
Crystal structure of anti-adaptor IraP that regulates RpoS proteolysis
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Shaw, G.X, Gan, J, Suburaman, P, Battesti, A, Zhou, Y.N, Wickner, S, Gottesman, S, Ji, X.
登録日2023-03-20
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2.351 Å)
主引用文献Structural and functional study of anti-adaptor IraP-mediated regulation of RpoS proteolysis
to be published
8EVK
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BU of 8evk by Molmil
Crystal structure of Helicobacter pylori dihydroneopterin aldolase (DHNA)
分子名称: 1,2-ETHANEDIOL, Dihydroneopterin aldolase, PTERINE
著者Shaw, G.X, Cherry, S, Tropea, J.E, Ji, X.
登録日2022-10-20
公開日2023-03-01
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Structure of Helicobacter pylori dihydroneopterin aldolase suggests a fragment-based strategy for isozyme-specific inhibitor design.
Curr Res Struct Biol, 5, 2023
6AN4
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Crystal structure of Escherichia coli HPPK in complex with bisubstrate analogue inhibitor HP-39 (J1F)
分子名称: ((2-(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carboxamido)-N-(2-((((2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl)methyl)amino)-2-oxoethyl)acetamido)methyl)phosphonic acid, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, CHLORIDE ION
著者Shaw, G.X, Shi, G, Ji, X.
登録日2017-08-12
公開日2018-08-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Bisubstrate analog inhibitors of HPPK: Transition state mimetics
to be published
4PZV
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BU of 4pzv by Molmil
Crystal structure of Francisella tularensis HPPK-DHPS in complex with bisubstrate analog HPPK inhibitor J1D
分子名称: 1,2-ETHANEDIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate synthase, 5'-{[2-({N-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)carbonyl]glycyl}amino)ethyl]sulfonyl}-5'-deoxyadenosine
著者Shaw, G.X, Shi, G, Ji, X.
登録日2014-03-31
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.704 Å)
主引用文献Structural enzymology and inhibition of the bi-functional folate pathway enzyme HPPK-DHPS from the biowarfare agent Francisella tularensis.
Febs J., 281, 2014
6AN6
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BU of 6an6 by Molmil
Crystal structure of Escherichia coli HPPK in complex with bisubstrate analogue inhibitor HP-72
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-{2-[{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}(phosphonomethyl)amino]ethyl}-5'-thioadenosine
著者Shaw, G.X, Shi, G, Ji, X.
登録日2017-08-12
公開日2018-08-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bisubstrate analogue inhibitors of HPPK: Transition state mimetics
to be published
2F09
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BU of 2f09 by Molmil
Solution Structure of the gene product of E. coli gene ydhA
分子名称: Hypothetical protein ydhA
著者Shaw, G.S, Revington, M.J, Ontario Centre for Structural Proteomics (OCSP)
登録日2005-11-12
公開日2005-12-13
最終更新日2022-03-09
実験手法SOLUTION NMR
主引用文献The solution structure of the Escherichia coli gene product ydhA.
To be Published
7KDO
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BU of 7kdo by Molmil
Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-73
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
著者Shaw, G.X, Shi, G, Ji, X.
登録日2020-10-09
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Transition state analogs for high affinity binding.
Bioorg.Med.Chem., 29, 2021
7KDR
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BU of 7kdr by Molmil
Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-75
分子名称: 1,2-ETHANEDIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-{[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]sulfonyl}-5'-deoxyadenosine, ...
著者Shaw, G.X, Shi, G, Ji, X.
登録日2020-10-09
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.488 Å)
主引用文献Bisubstrate inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: Transition state analogs for high affinity binding.
Bioorg.Med.Chem., 29, 2021
4F7V
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BU of 4f7v by Molmil
Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1D (HP26)
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-{[2-({N-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)carbonyl]glycyl}amino)ethyl]sulfonyl}-5'-deoxyadenosine
著者Shaw, G, Shi, G, Ji, X.
登録日2012-05-16
公開日2012-07-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Bisubstrate analog inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New lead exhibits a distinct binding mode.
Bioorg.Med.Chem., 20, 2012
8SP4
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BU of 8sp4 by Molmil
Crystal structure of N-terminally truncated Escherichia coli RapA in complex with ATP-gamma-S
分子名称: CHLORIDE ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RNA polymerase-associated protein RapA
著者Shaw, G.X, Kakar, S, Ji, X.
登録日2023-05-02
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Crystal structure of N-terminally truncated Escherichia coli RapA in complex with ATP-gamma-S
To be published
8SO8
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BU of 8so8 by Molmil
Crystal structure of an N-terminally truncated variant of Escherichia coli RapA
分子名称: CHLORIDE ION, RNA polymerase-associated protein RapA, SULFATE ION
著者Shaw, G.X, Kakar, S, Ji, X.
登録日2023-04-28
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.607 Å)
主引用文献Crystal structure of an N-terminally truncated variant of Escherichia coli RapA
To be published
8SPG
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BU of 8spg by Molmil
Crystal structure of N-terminally truncated Escherichia coli RapA in complex with MgADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
著者Shaw, G.X, Ji, X.
登録日2023-05-03
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of N-terminally truncated Escherichia coli RapA in complex with MgADP
To be published
8SL9
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BU of 8sl9 by Molmil
Crystal structure of Francisella tularensis HPPK-DHPS in complex with HPPK inhibitor HP-73
分子名称: 1,2-ETHANEDIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine, ...
著者Shaw, G.X, Shi, G, Cherry, S, Needle, D, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2023-04-21
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of Francisella tularensis HPPK-DHPS in complex with HPPK inhibitor HP-73
To be published
6BOG
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BU of 6bog by Molmil
Crystal structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription
分子名称: RNA polymerase-associated protein RapA, SULFATE ION
著者Shaw, G.X, Gan, J, Zhou, Y.N, Zhang, R, Joachimiak, A, Jin, D.J, Ji, X.
登録日2017-11-20
公開日2017-12-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.205 Å)
主引用文献Structure of RapA, a Swi2/Snf2 protein that recycles RNA polymerase during transcription.
Structure, 16, 2008
1PON
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BU of 1pon by Molmil
SITE III-SITE IV TROPONIN C HETERODIMER, NMR
分子名称: TROPONIN C
著者Shaw, G.S, Sykes, B.D.
登録日1996-04-02
公開日1996-11-08
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献NMR solution structure of a synthetic troponin C heterodimeric domain.
Biochemistry, 35, 1996
8SIF
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BU of 8sif by Molmil
Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-101
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-{(2R,4R)-1-[3-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)propyl]-2-carboxypiperidin-4-yl}-5'-thioadenosine
著者Shaw, G.X, Shi, G, Ji, X.
登録日2023-04-16
公開日2024-07-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The first bisubstrate inhibitor of HPPK exhibiting cell permeability
To be published
8SK1
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BU of 8sk1 by Molmil
Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
著者Shaw, G.X, Tropea, J.E, Shi, G, Waugh, D.S, Ji, X.
登録日2023-04-18
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
To be published
8SV5
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BU of 8sv5 by Molmil
Crystal structure of Bacillus anthracis dihydroneopterin aldolase in complex with 6-hydroxymethyl-7,8-dihydropterin
分子名称: 1,2-ETHANEDIOL, 2-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE, 7,8-dihydroneopterin aldolase
著者Shaw, G.X, Li, Y, Yan, H, Ji, X.
登録日2023-05-15
公開日2023-06-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Crystal structure of Bacillus anthracis dihydroneopterin aldolase in complex with 6-hydroxymethyl-7,8-dihydropterin
To be published
1CTD
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BU of 1ctd by Molmil
DETERMINATION OF THE SOLUTION STRUCTURE OF A SYNTHETIC TWO-SITE CALCIUM-BINDING HOMODIMERIC PROTEIN DOMAIN BY NMR SPECTROSCOPY
分子名称: CALCIUM ION, TROPONIN C SITE III - SITE III HOMODIMER
著者Shaw, G.S, Sykes, B.D.
登録日1992-11-12
公開日1993-10-31
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Determination of the solution structure of a synthetic two-site calcium-binding homodimeric protein domain by NMR spectroscopy.
Biochemistry, 31, 1992
1CTA
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BU of 1cta by Molmil
DETERMINATION OF THE SOLUTION STRUCTURE OF A SYNTHETIC TWO-SITE CALCIUM-BINDING HOMODIMERIC PROTEIN DOMAIN BY NMR SPECTROSCOPY
分子名称: CALCIUM ION, TROPONIN C SITE III - SITE III HOMODIMER
著者Shaw, G.S, Sykes, B.D.
登録日1992-11-12
公開日1993-10-31
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Determination of the solution structure of a synthetic two-site calcium-binding homodimeric protein domain by NMR spectroscopy.
Biochemistry, 31, 1992
8SD5
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BU of 8sd5 by Molmil
Crystal structure of HPPK from Methanocaldococcus jannaschii
分子名称: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, SULFATE ION
著者Shaw, G.X, Needle, D, Stair, N.R, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2023-04-06
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.802 Å)
主引用文献Crystal structure of HPPK from Methanocaldococcus jannaschii
To be published
8SSX
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BU of 8ssx by Molmil
Crystal structure of Bacillus anthracis dihydrofolate reductase at 1.65-A resolution
分子名称: 1,2-ETHANEDIOL, Dihydrofolate reductase, SULFATE ION
著者Shaw, G.X, Li, Y, Wu, Y, Yan, H, Ji, X.
登録日2023-05-09
公開日2023-05-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of Bacillus anthracis dihydrofolate reductase at 1.65-A resolution
To be published
8SZE
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BU of 8sze by Molmil
Crystal structure of Yersinia pestis dihydrofolate reductase in complex with Trimethoprim
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Dihydrofolate reductase, ...
著者Shaw, G.X, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2023-05-29
公開日2023-06-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of Yersinia pestis dihydrofolate reductase in complex with Trimethoprim
To be published
3UDE
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BU of 3ude by Molmil
Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1B
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[1-(2-{[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)methyl]amino}ethyl)piperidin-4-yl]-5'-thioadenosine, ACETATE ION
著者Shaw, G, Shi, G, Ji, X.
登録日2011-10-28
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.881 Å)
主引用文献Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.
Bioorg.Med.Chem., 20, 2012
3UD5
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Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1A
分子名称: 1,2-ETHANEDIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[1-(2-{[(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl]amino}ethyl)piperidin-4-yl]-5'-thioadenosine
著者Shaw, G, Shi, G, Ji, X.
登録日2011-10-27
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.
Bioorg.Med.Chem., 20, 2012

 

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